Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06314 LG1 93571509 93572553 PREDICTED: ethylene-responsive transcription factor 5
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
C/A 93571637 missense_variant p.Arg12Ser
A/T 93571939 missense_variant p.Lys112Asn
G/A 93572007 missense_variant p.Arg135His
G/A 93572011 synonymous_variant p.Gln136Gln
G/A 93572013 missense_variant p.Arg137Gln
G/A 93572019 stop_gained p.Trp139*
G/C 93572021 missense_variant p.Gly140Arg
C/T 93572035 synonymous_variant p.Ala144Ala
C/T 93572041 synonymous_variant p.Ile146Ile
C/T 93572042 missense_variant p.Arg147Cys
G/A 93572043 missense_variant p.Arg147His
C/G 93572047 missense_variant p.Asp148Glu
C/T 93572059 synonymous_variant p.Arg152Arg
G/A 93572060 missense_variant p.Gly153Arg
C/T 93572092 synonymous_variant p.Thr163Thr
C/T 93572095 synonymous_variant p.Ala164Ala
C/T 93572103 missense_variant p.Ala167Val
C/T 93572107 synonymous_variant p.Ala168Ala
C/T 93572116 synonymous_variant p.Tyr171Tyr
G/A 93572121 missense_variant p.Arg173His
C/A 93572131 missense_variant p.Phe176Leu
C/T 93572138 missense_variant p.Arg179Cys
C/A 93572145 stop_gained p.Ser181*
C/G 93572170 synonymous_variant p.Leu189Leu
G/T 93572182 synonymous_variant p.Ala193Ala
G/A 93572183 missense_variant p.Val194Met
G/C 93572197 synonymous_variant p.Ala198Ala
G/A 93572389 synonymous_variant p.Ser262Ser
T/A 93572481 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06314.1
MANAAEVSALNRIKLHLLGELSPLATPQNNQTNQSPSQSSSSDSCLSFDHCFTELLDPQIQLPLFEFDSKPQIIDLDTPKPLTSTHKKPQLNRKPSLQISLPKQTEWIQFGKQDPNPAVLLPENQPEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFRLRGSKAILNFPLEAGAVEETADAEGERKRRREEEEEVEEVKPVVKKEKTTEQEVNCFREMPLTPSMWTGFWDNDVKEIFNVPPLSPLSPLPAFGFSQLMVV*


CDS Sequence:
>Vu_06314.1
ATGGCCAACGCAGCAGAAGTTTCAGCTTTGAATCGCATCAAGTTGCATCTTTTAGGTGAACTCTCTCCACTCGCCACTCCCCAAAATAATCAAACCAATCAAAGCCCTTCTCAATCTTCTTCCTCAGACTCTTGCCTCTCCTTCGATCACTGCTTCACTGAGCTCCTCGATCCTCAAATTCAATTACCCCTTTTCGAATTCGACTCCAAACCCCAAATAATCGACCTCGACACCCCCAAACCCCTCACATCGACTCACAAGAAACCTCAATTAAATCGGAAACCTTCTCTGCAAATCTCTCTCCCCAAGCAGACCGAGTGGATCCAATTTGGGAAACAGGATCCCAACCCGGCTGTGCTATTGCCGGAGAACCAGCCGGAGAAGAAGCACTACAGAGGAGTCCGCCAGCGGCCTTGGGGAAAGTTCGCCGCCGAGATCCGCGACCCGAACAAGCGCGGGTCGAGAGTGTGGCTTGGAACCTTCGACACCGCCATCGAGGCCGCCAAGGCCTACGACCGTGCTGCCTTCAGGCTCCGCGGCTCAAAGGCCATCCTCAACTTCCCGCTCGAAGCAGGCGCGGTGGAGGAGACCGCGGACGCCGAAGGCGAAAGGAAGCGGCGGCGCGAGGAGGAGGAGGAGGTAGAGGAAGTGAAGCCGGTTGTGAAGAAGGAGAAAACGACGGAACAGGAGGTGAACTGTTTTCGGGAGATGCCGTTAACGCCGTCTATGTGGACCGGGTTCTGGGATAATGATGTGAAGGAGATTTTCAACGTTCCGCCGTTGTCGCCGTTATCTCCTCTTCCGGCTTTTGGATTTTCACAACTAATGGTTGTGTGA


Promoter Sequence:
>Vu_06314::LG1:93569509-93571509(+)
ATAAAAAGTACTATTGTAGATTTAAAAAAAAAAATCTTTTATTGATTTTTTAACTTTTATCTCATCCACGGGTGGTATCGGCATCTAAACTACTTATACAATAAAGGATATCACAACGTCTCACTGAGGTTAAAATAATAGAATATTCAAAAATAATGATTTTAACCTGTCTGTTAATTAATTTTCTTAATTTTTTATGGATTTATGAAGAATGTTAACTTTGGATCTACACTAAGTAAATAAAAATTTGAACCAGTCACTTTTCTGCCATTGGATACTGATTTTGTTATTTGATTTAAAAAACTAAATCCGACCAAATTCGTCGAAGCTGATATATATTAAGATTATTCAAACAAAACATATATATATATACACACACACACAAAAAAGTCACTGAAAGACTTTGTTTGCACGTTGCAGCCACAGTTTTAAATCAACCAAGTGACCAAATCCACATGTCACATTCCGCTTTCTCATTTTCTTGAACTCTTCAAATAAATTGTGTTTGGTCGAATTTTCTTAACAAACTCTTCAACCAAATCAATCCAATGTTTTATTGCATTAATACGTTTTTGTCATTATGAAGTTGTTAAATATTTTACAATAAACAGTTGTTAAACAAAATATTTATTATAAGATTTTTTTAAATTCATAATTTTAACTTAATATATATTAATACAAATTATATAATTTTATAATTGAAATTCTAATACGAATTTATGTTTTTATATTATGTGTATATAGATTATAATTAACCACTTTAGTCTGACCATCTGACTGATCTATCTGGATTGACAACTCTTGATTGATTATTATAAATCAATTATCCTCAATCGATCACCCTGACCGAACAATATAAATGATCAGTTACAAAATAAAGGTCATGTTAACATAAATAATAATTATGAATCAATTTACTACTACTCATTAAAATATGATTAAATGTAATTAGACCGACAAAAAGATAAAAACTCATAACACTATCATAAGTAAAAGTCTAAGATGAATTTCAAATACATACACAACACACACATCATGGAACCTAATATTTTTCTTTTTAGTCACAATTTTTATTTTAACATTAAAGTATTTTATGTAAATATCATTCAAAAGTTTAAACGCACGAAAAACTATTCAAACCAAACAACACTTGAATTTGGAAACCACCAATTAAACTAACCAATTGACATAAAATTCACTAAATTGATCAGTTGACCTTAAAACCACTATTGGACTAATTGAGATAAAGACTTGCTTGACAACTCTCTAAACAATTTCGTTTTATAAATATAATAAATAAAGTACAATCATACTACAAAATTTTTCTTTCTAGTTGAATCTATCTACTACATATATAATATTAACATAAATACAATAAGGTTTTGGTTTAATCTTTCTATTATGAATCCAAACAAAACCGTCTGGTAGTGGGAAAAAATAAAAGTTAAAAGAAATTTAAATTTGAATAATTCTTTTGCTTTTAGTTTAATTTGTGATTATTCTTTTAGCCGAATCTAGTTTTGAATCATCCCAGCTACGCAAGAAGGTCGTCTGGACTTTTAATTATCTACCATCTGTAGCGTATAGAAAAGTTAAACTCGGTATTTTTCATTAGAAAAAAAAATATTTGTTTAAAAGTCAAATGACAGTTGAACAAAATAGATAAAGTACATGAGGAGTAATCGAAATTTGAGAAATTGTGTTGTGAAATAAAAAGAGAGGTAAAAATAGAAAGAAAGAGAAGGTTAGTTTTGTAAAGTAAAGAGGGGAGAAAAGACAAAAGAAGAGGTAATTAGAAAAAGGATATGGAACAGGGTTAGTAGGGTGTTCCGGAGCGCAGAGAATTAAAATATCCATGTTTTCACGATAAGAATAATTGATGATGCAAGTTGTAGGATGCTTCGTGATTCCATCGTAGCAGGAGAGTTGAAAGTCGCCTACAAGTTAAAAATTTGAGCTTTCTCCCCACTATATAAACCCCATTCAACTCAACTAAGACA


Gene Sequence:
>Vu_06314(+)
ACACGACTCAATCCGATCCAAACCAAACTAAACCTCATCCCTTGCAATTCTTCAAACACTTTACCTGCAAAGACCAAACGCGCTTCAACTCAAGCATGGCCAACGCAGCAGAAGTTTCAGCTTTGAATCGCATCAAGTTGCATCTTTTAGGTGAACTCTCTCCACTCGCCACTCCCCAAAATAATCAAACCAATCAAAGCCCTTCTCAATCTTCTTCCTCAGACTCTTGCCTCTCCTTCGATCACTGCTTCACTGAGCTCCTCGATCCTCAAATTCAATTACCCCTTTTCGAATTCGACTCCAAACCCCAAATAATCGACCTCGACACCCCCAAACCCCTCACATCGACTCACAAGAAACCTCAATTAAATCGGAAACCTTCTCTGCAAATCTCTCTCCCCAAGCAGACCGAGTGGATCCAATTTGGGAAACAGGATCCCAACCCGGCTGTGCTATTGCCGGAGAACCAGCCGGAGAAGAAGCACTACAGAGGAGTCCGCCAGCGGCCTTGGGGAAAGTTCGCCGCCGAGATCCGCGACCCGAACAAGCGCGGGTCGAGAGTGTGGCTTGGAACCTTCGACACCGCCATCGAGGCCGCCAAGGCCTACGACCGTGCTGCCTTCAGGCTCCGCGGCTCAAAGGCCATCCTCAACTTCCCGCTCGAAGCAGGCGCGGTGGAGGAGACCGCGGACGCCGAAGGCGAAAGGAAGCGGCGGCGCGAGGAGGAGGAGGAGGTAGAGGAAGTGAAGCCGGTTGTGAAGAAGGAGAAAACGACGGAACAGGAGGTGAACTGTTTTCGGGAGATGCCGTTAACGCCGTCTATGTGGACCGGGTTCTGGGATAATGATGTGAAGGAGATTTTCAACGTTCCGCCGTTGTCGCCGTTATCTCCTCTTCCGGCTTTTGGATTTTCACAACTAATGGTTGTGTGAAATTAGTGATTTAAGAGTGCTTTTGGTTCTTTTTACAGCGTCCTGTTTGGGGATGAGTACAGTGTACATTTCACAAATTTGTTAATTCAACAATCTTCAATCGTTCTCCGATC