Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06201 LG1 91943093 91944403 PREDICTED: transcription factor RAX3-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
C/T 91943156 missense_variant p.Arg299Lys
C/T 91943470 synonymous_variant p.Pro194Pro
G/T 91943678 missense_variant p.Thr125Lys
T/A 91943862 intron_variant
G/T 91943922 intron_variant
T/C 91944088 missense_variant&splice_region_variant p.Asp46Gly
A/C 91944120 intron_variant
A/T 91944121 intron_variant
G/T 91944263 splice_region_variant&intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06201.1
MGRAPCCDKANVKRGPWSPEEDAKLKSYIEEHGTGGNWIALPQKIGMKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVNIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGKQRKEHHAEARRVGGPKQEIKRESEDLMLPVGVISRTPHWPHEQNSWPIPVANAYCDLNNQTSPIVHIPDTTVTATVNSQYSSFDISLTQDQLYPSTVNTITTDTCHTSNVFQGFGNFSSDLACVDPQHIDGSSERLFYGMESMEIGNGSTNTTSTESTSWGDISSLVYPPLVSHYESCQQRILPQEVTFDGSSYFAMQTQ*


CDS Sequence:
>Vu_06201.1
ATGGGGAGAGCTCCTTGCTGTGACAAAGCCAACGTGAAGAGAGGTCCATGGTCGCCTGAAGAAGACGCCAAACTCAAATCTTACATCGAAGAGCACGGCACCGGTGGCAACTGGATAGCCTTGCCCCAGAAAATAGGTATGAAAAGGTGCGGCAAAAGTTGTCGTCTCAGATGGCTGAACTATCTTCGCCCAAACATCAAACACGGGGGTTTCTCAGAAGAAGAAGACAACATAATTTGCAGCCTCTATGTTAACATTGGAAGCAGGTGGTCAATTATAGCAGCGCAGTTACCAGGGCGCACGGATAATGACATAAAGAACTATTGGAACACCAAGCTGAAGAAGAAGCTACTGGGGAAGCAAAGGAAGGAGCATCACGCTGAAGCTCGAAGAGTTGGTGGCCCAAAGCAAGAGATCAAAAGAGAGAGTGAAGATTTGATGTTACCTGTGGGAGTTATTAGCCGAACTCCTCATTGGCCACACGAACAGAATTCTTGGCCCATTCCAGTGGCAAATGCTTACTGTGATCTCAACAACCAAACATCACCGATCGTACACATCCCTGACACCACAGTCACTGCCACCGTGAACTCACAATACTCATCATTTGACATTTCCTTAACACAAGACCAGCTATATCCCTCCACAGTGAACACGATCACAACGGACACGTGTCACACATCAAATGTGTTTCAAGGGTTTGGGAACTTCTCCAGTGATTTGGCCTGCGTGGACCCGCAGCATATAGATGGATCATCAGAACGGCTTTTTTATGGAATGGAATCAATGGAAATCGGCAATGGCAGCACAAACACGACTTCAACAGAAAGCACTAGTTGGGGAGATATAAGCTCTTTGGTTTACCCGCCTTTGGTTTCTCACTACGAATCTTGCCAACAGAGAATACTGCCTCAAGAAGTTACTTTCGACGGGTCTAGTTACTTCGCAATGCAAACGCAATAA


Promoter Sequence:
>Vu_06201::LG1:91944403-91946403(-)
GATTGTTTGTGATAATCAATCAACATTACATATACGCAAAATCCATTTTTCATTAAAGAACAAAACATATTTTAAATTTGATTGTCATTTTGTTCAAAATGAAGTAACATCTAACATAATTTGTCCCTTATATATTCCTACCAAAGTATAACTAGCAAACATTTGTACAATGGTATTGAGAAAAAAACAATTTAAATATCTTCTATGTAAATTAGACATTCAAGATTTTATGCTCCAAAAATTGAAAGGATATTGAGAAATTATCACCATAACTAGTTATTCTATTTTATTATTGATTAGGAGATATTCTTATGATAATTTTTCAAACATAAATTTATGGATGTTTTTAGTGACTTTAATTTTATTTCATTTTTGGTAACTGAGTATTGTAACATATATTTATGCTATATATTTATGTTGATGAATAAAGGATATGAGTTTTTTTTTTTTTTTGGTAAAACTTATCAATAGTAAAACAAATTTAAAGAAAAACAACATTGAAATCTTCAAAATAAAATAAAAACTAAATTAAAATAAAAAGATTAAGAAGTCACATTAACTAAACATCTTTCGTAAAAAAAAGTTTACAGACGTTGAATTGATTGCACATTGAATGTTGAGAGACTTGAACTATAATCTACCTTGCTTTTTCTCTGATACGAAAATCCAAACCAGTGTTAAATTGGTAAGTATTTCGACGTAATTACTAACTAGTGGACATTAGGTCACCAACCATAACGAAATATATGCGCTGATATATATATATATATATAATACAATTCTAATTTATAATTAAATATTAAGCAATTTGCCTGCTGGCTAGATCTTCATCATCAATCTAATTTCATCTTCTTTTTTCCCTATAATAAATGATAAAAATTTAACTCTATCAGTCTCTTTTCCGTTACTCTTTTATAGTTTCCTTTGAGTGAAAGATTTCTGAAGCTCAGAACTGAACTTTAACCCTAATTAGCATGAGAGACGACTCTCCTAGGCCTCTATATTTTTGAAGCACAATGATAGTTCGATAATCACATTAATCCATTAAATTTTTAACAGTTTCATAAACTTAATTTTTATATGGATACGTAAAGTCGTAATATTTTCAAAAGCTCGTTAAATTTAGATGGTTTCATCACTTTTCTACGTACTCGTGGTCCCACCCTTACATATTACACATGATTTTACGATCATCATCATCATCAACCATTTGTTAACATCGACAATAGTTATTTTGATAAAATAATAATACACGAGAAACCTATGTACATTATTTGAATGGAATATAAATAAATTAGTTATGTTATTTGTTTGCACCTATTTAACAACTTTATATAATATTTTTCTCTTCGTATCCATCGCTTTATATTATATATATGTATGTGTTATGTCTTTCCATTTTTTTTTATAAAAAAAACTGTACAGACAATTTTTTTTTTTAAATAGATTCTGAAGAACGAAAGACATGGTTAAAAGACCAGCTCCGCTGTGTGTGGTTTCCAATTCTTCCACAAGTTTATGCTGCTTCAATTTTTAATTAATATTTTTAAGGACTCAAGTCTTCGGTTCTCTTCTTCACTTCAACTATACCTTTAAATAAAATATTACCAGCCATATTAGTTGACACTAGTGTACAAGGGTTTACCCCCTACCACTCTTTCAATATTAATTATTTCGCTAATAGAAAAAAGTAATTCACCAATAAATACAATTAAAATTGATCATCGTAAGATTTCCAATTTACATTTAACGTGTTATTTCCATTAAAGTAAATGATAATATTAAAAATACATAAAATGAGGAAAGGAAATTGAATTCCTTTACCAAAAGTTGGAAGTTTTCTGTCCTTCTTGCTCGAGGCAATTACTCTCTCTTTCGCTCTACCTTCCTCCTTTATATAAACATAATCATTATCATCATTCTTATAAACCTGCAATAAACATTGGCTTTACTTGAAACTGTGGTGAGTTAAACAGCAGAGAGAAGCATAGAAGGAAAAC


Gene Sequence:
>Vu_06201(-)
ATGGGGAGAGCTCCTTGCTGTGACAAAGCCAACGTGAAGAGAGGTCCATGGTCGCCTGAAGAAGACGCCAAACTCAAATCTTACATCGAAGAGCACGGCACCGGTGGCAACTGGATAGCCTTGCCCCAGAAAATAGGTACCTCCATATGAATTTTCATCAATCATCAATACAAATCAAACATATATATATATCCACTTTTATTTTTTATTTTTTCTTTATTACACTTGTAATAAACTTGGTTCTTAATTTAACAGTCTTTCCAAACCCCAAATTTCTTTATGTTGGAGTGTTGATTTTTTTCTGCGTGTATAGGTATGAAAAGGTGCGGCAAAAGTTGTCGTCTCAGATGGCTGAACTATCTTCGCCCAAACATCAAACACGGGGGTTTCTCAGAAGAAGAAGACAACATAATTTGCAGCCTCTATGTTAACATTGGAAGCAGGTAAATTCATTATTCATCTCCACGTAGTCAAATACCAACTCCTCTACCCATTTTTTTATGCCAAAATTCGACATTCTTTACAAGAATCTGAGAGCACAATAACTGAGGATCAAACTCACAGAGACTATAATACCATATCATGAACTGAGTGACGCGTTTTGATATATGCAGGTGGTCAATTATAGCAGCGCAGTTACCAGGGCGCACGGATAATGACATAAAGAACTATTGGAACACCAAGCTGAAGAAGAAGCTACTGGGGAAGCAAAGGAAGGAGCATCACGCTGAAGCTCGAAGAGTTGGTGGCCCAAAGCAAGAGATCAAAAGAGAGAGTGAAGATTTGATGTTACCTGTGGGAGTTATTAGCCGAACTCCTCATTGGCCACACGAACAGAATTCTTGGCCCATTCCAGTGGCAAATGCTTACTGTGATCTCAACAACCAAACATCACCGATCGTACACATCCCTGACACCACAGTCACTGCCACCGTGAACTCACAATACTCATCATTTGACATTTCCTTAACACAAGACCAGCTATATCCCTCCACAGTGAACACGATCACAACGGACACGTGTCACACATCAAATGTGTTTCAAGGGTTTGGGAACTTCTCCAGTGATTTGGCCTGCGTGGACCCGCAGCATATAGATGGATCATCAGAACGGCTTTTTTATGGAATGGAATCAATGGAAATCGGCAATGGCAGCACAAACACGACTTCAACAGAAAGCACTAGTTGGGGAGATATAAGCTCTTTGGTTTACCCGCCTTTGGTTTCTCACTACGAATCTTGCCAACAGAGAATACTGCCTCAAGAAGTTACTTTCGACGGGTCTAGTTACTTCGCAATGCAAACGCAATAA