Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06104 LG1 90685708 90687080 PREDICTED: transcription factor MYB44-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
G/A 90685731 5_prime_UTR_variant
G/T 90685735 5_prime_UTR_variant
G/T 90685843 missense_variant p.Asp21Tyr
C/G 90686048 missense_variant p.Thr89Ser
T/C 90686064 synonymous_variant p.Leu94Leu
T/A 90686085 synonymous_variant p.Ala101Ala
C/T 90686088 synonymous_variant p.Ile102Ile
G/A 90686121 synonymous_variant p.Lys113Lys
G/A 90686178 synonymous_variant p.Pro132Pro
C/G 90686193 synonymous_variant p.Arg137Arg
C/T 90686444 missense_variant p.Pro221Leu
G/T 90686517 synonymous_variant p.Ala245Ala
G/A 90686846 3_prime_UTR_variant
A/G,* 90686894 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06104.1
MMAVSRKDMDRIKGPWSPEEDEALQKLVERHGPRNWSLISRSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASIMIAEDPAAAAAGFSPQPLKRSFSAGAALPPGSPSGSDVSETSAPGVVSPSHVFRPVAVRPVVETASSCDDGPTTSLSLSLPGVESSETSNRAGAMQANPFTMAPVTTVASPAAEVGMGALNLSAEFMAVMHEMIKKEVRSYMEQQSAMCFQGVDGFRNVSVKRIGISRVDS*


CDS Sequence:
>Vu_06104.1
ATGATGGCCGTAAGCCGAAAGGACATGGACCGGATCAAGGGTCCATGGAGCCCCGAAGAGGATGAGGCCCTGCAGAAGCTGGTGGAGAGGCACGGGCCCAGAAACTGGTCGCTCATAAGCAGGTCAATCCCGGGCCGCTCTGGAAAATCCTGCAGGCTCCGATGGTGCAACCAGCTGTCGCCCCAGGTTGAGCACCGGGCTTTCACGCCCGAGGAAGACGACACAATAATCCGCGCTCATGCCCGTTTCGGCAACAAGTGGGCCACCATAGCCCGCCTTCTTTCGGGTCGCACCGATAACGCTATCAAAAACCACTGGAACTCAACCTTAAAGCGCAAGTGCGCCTCCATCATGATCGCCGAAGATCCCGCCGCCGCCGCTGCCGGTTTCAGTCCGCAGCCTCTCAAGCGCTCCTTCAGCGCCGGCGCTGCCCTGCCCCCGGGAAGCCCCTCGGGATCCGATGTGAGCGAGACCAGCGCCCCTGGTGTAGTCTCCCCATCGCACGTGTTCCGGCCCGTGGCGGTTCGACCCGTGGTCGAAACGGCGTCGTCGTGCGACGACGGTCCCACCACCTCGCTGTCGCTGTCTCTTCCCGGCGTGGAGTCATCGGAAACCTCGAATCGGGCAGGCGCGATGCAAGCTAATCCCTTCACTATGGCGCCGGTGACGACCGTAGCGAGTCCGGCGGCGGAGGTTGGAATGGGAGCGTTGAATTTGAGTGCGGAGTTTATGGCGGTGATGCATGAGATGATAAAGAAGGAGGTTCGGAGTTACATGGAGCAGCAGAGTGCGATGTGTTTTCAGGGTGTGGACGGTTTTAGGAACGTGTCGGTGAAGCGAATTGGGATTAGCAGGGTTGATTCCTAA


Promoter Sequence:
>Vu_06104::LG1:90683708-90685708(+)
ATTATTTTCCTCACCCTTTCCCTCACTCAATACAGCTGCCAAATGCCATTTCAAAATTATGCTTACTGTAGTAATTATTCACATCACTTTCATTTTGCTGTCCACTACTCACTCACCTAAATATCCTTTTACATTTTTATTTATTCCTGTAATAACAGTTGGAACATTTCAGAGACAACAAACACATTTATTTCATATTCTATTAATCCTCAGTTTTTAGATCAAACACTAACAACAGACATGTTGTTAATCAGGCTTATAAATAATCAGGTGATTACTGAAAACATTTATTTATGTTGTATAAATTAAAGAGTTATTTATAAGAGTTATGTCAGAATGTCTAGACGGTATCCAGATTTAGAAGGACATTATAATATGGTATTGGTATAGATACGAGAATTAAAAAAGGAGAGGGGTATAGTGTAATGAAGAGAAATGTAACATTTTGATAAAGATAAAGAAGGTGGAAAATAATAAATATTATAGTGCATGGAGACAGGAGCAGTGGGTAGGAGGTACAAGTAACAGAAAGGGGTTGGATACGGATCTGTTGGATCATATCTTTGGCATTTGAATAGTGAGTACCATACCCCCATCCTACCCGACAACTTTCTCTCTCGCCCTTTCCCTATACCTTGCTTTAATTATACATCCCCTAATCCCCACTTTCTGCTTATTAATTCATTATTAACATATTTAATACTATCATTTTTTTTTCATCTAACTGACATATTAATTTTAAATAATTCCGGTTTTGTAAGAGGTACATAATAATAATAGTATATATTAAGAATTATTATTGACGAGGAAGATGAGAGGAAGCGACCGACAGGTGTATGTGGAGGAACACGATAGAGGCAGGTAAAGAATACAGGCTGGACTGACAGGAAAGCAGTAATGATTCGCGTTCCGATTCGGCGATTGATCTTGTCGTTTTCTGCCACCTCAGCATACTATGGACCCTTCCCCTATTTTTTTCCTACGAAAAGGACCAAACTTGAAAAAAAAAATATCCCACACGAAATGCTCTACAGCCTGGAATAGTCCTCAGTCAAACTCAAGCAAGCAAGGAACCTCAGCCATCATCACCCAACCGTTATCATCGTTATCTCTCTTTTTTTTCCTCTTTTCCGTTTCTCCTTCTTCTTTTTTAATTTTTTTCATTTTATTATTATTTTAACTTTCAGATTTATGGTTCTCGGCGTTTTCTTTGTCCACATTAATTTAACTTCCACAACTGTTCTATTCTATTCGTGTCCACATCCACCTAGCTCCCAGACACCTCAAACACGTTTCTTTTTTTCTAAACTCACCTCTCATTTCTTTAATGTCTTTCTGCTACTTTCGTTTCATGATTTATGTTTAAACTTTACATTAAATATTAACACATTAACTGTAACCACAGTTTAATTCGATTAAAAAAAAGCTGTCGAAAACGCTAAAAGAAACTAATATTTAAAAATTCATCCAAATTCTATTCTTCTTTAATGACATAAAACTGGTACAGGAAAAAAAGAAGTCAAAAGTGAGTTTCAAGATTGGAGGCTATTATTGAGTGGAGCGTCGTCTGTGCAGTGGACGCGCTGTTTTGCATGAAGAGAATAGTTAAAAATTACTAGAGCCAAAAACAAAATATTTTTAATTTTTAATTTATTTATGGTTACATTATTTATTCATTAATTTTACTGATGGAGAAGATGTACAGGATCCATAATATATTTATATAACTTTTTTCAGTTAAATTAATAAAAAGGGGAATTTGAAAGGATAAATGAGTAGGGGGAGAAGAGATGACTTGTGTAAAGGGAACAATCTAAGAATGGACGCGTGTCCAATTACAGCTGTATCCCAACTCCAGAGGCAACCGCTTCCCAGGAAAAACCGGTACCATGAACAATACAACCGACGCTGAAACCCGTAAAAGTGGAACCCCCTAAACCGGTTGCCCCACACCCCATCTCTTACAGATATAAGAAAGCGCAAGCATGCTCTAACGACCC


Gene Sequence:
>Vu_06104(+)
CAATGCTCCACCACAATAACTCAGCCAGAGAAACCCTTCTTCATTCCCTTCATCAAGCCACAACACAGTGATATCATGATGGCCGTAAGCCGAAAGGACATGGACCGGATCAAGGGTCCATGGAGCCCCGAAGAGGATGAGGCCCTGCAGAAGCTGGTGGAGAGGCACGGGCCCAGAAACTGGTCGCTCATAAGCAGGTCAATCCCGGGCCGCTCTGGAAAATCCTGCAGGCTCCGATGGTGCAACCAGCTGTCGCCCCAGGTTGAGCACCGGGCTTTCACGCCCGAGGAAGACGACACAATAATCCGCGCTCATGCCCGTTTCGGCAACAAGTGGGCCACCATAGCCCGCCTTCTTTCGGGTCGCACCGATAACGCTATCAAAAACCACTGGAACTCAACCTTAAAGCGCAAGTGCGCCTCCATCATGATCGCCGAAGATCCCGCCGCCGCCGCTGCCGGTTTCAGTCCGCAGCCTCTCAAGCGCTCCTTCAGCGCCGGCGCTGCCCTGCCCCCGGGAAGCCCCTCGGGATCCGATGTGAGCGAGACCAGCGCCCCTGGTGTAGTCTCCCCATCGCACGTGTTCCGGCCCGTGGCGGTTCGACCCGTGGTCGAAACGGCGTCGTCGTGCGACGACGGTCCCACCACCTCGCTGTCGCTGTCTCTTCCCGGCGTGGAGTCATCGGAAACCTCGAATCGGGCAGGCGCGATGCAAGCTAATCCCTTCACTATGGCGCCGGTGACGACCGTAGCGAGTCCGGCGGCGGAGGTTGGAATGGGAGCGTTGAATTTGAGTGCGGAGTTTATGGCGGTGATGCATGAGATGATAAAGAAGGAGGTTCGGAGTTACATGGAGCAGCAGAGTGCGATGTGTTTTCAGGGTGTGGACGGTTTTAGGAACGTGTCGGTGAAGCGAATTGGGATTAGCAGGGTTGATTCCTAATTATGACGTAATTAGTGTTGAGAAAAGGAGGTTTATGAGTTATGATGAAGGATAAAAAGGAAGCTGTTTTCCTTTTTATTTTAGGGAATAATATTGGTTAGTGTACAGTTGGAAGAGAGGAGAGAAGACAAAAGTAGCATGGAACGATGAAAATTGAAATTTCATGGCAAATCTGAAATTTCTTTCAACCTCTTGTGCTTCAGGTTTTCTTTAGAAAAAGATAAAAACAAGCGCTAGAGAGAGAAGGGTAGGATTTTTAAATCAATGGAATATCCTCAAATTTTCAATATTAAGTTCAATTTATTTTGTTATTTGCTTAAGCATAATGTAAATATTTATTTTGGTTGAAACCCAAAATTAGCAAATAGCGTTTCACGCTCACCAACTAGAACAGAAAGGAAACCGGTACTTTCAAAGTAGTTTTTGTCTGT