Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06102 LG1 90641781 90644760 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g37250
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of flower development, phosphorylation, negative regulation of cellular process, regulation of multicellular organismal process, protein phosphorylation, regulation of reproductive process, negative regulation of cellular macromolecule biosynthetic process, unidimensional cell growth, flower development, negative regulation of cellular macromolecule biosynthetic process, protein phosphorylation, regulation of flower development, regulation of flower development, phototropism, regulation of flower development, regulation of developmental process, negative regulation of cellular macromolecule biosynthetic process, phototropism, unidimensional cell growth, unidimensional cell growth, response to light intensity, regulation of flower development, developmental growth, protein phosphorylation, phosphorylation
Cellular Component   located in   extracellular region
Molecular Function   enables   protein binding, protein binding, protein binding, protein binding, protein serine/threonine kinase activity, protein binding, protein serine/threonine kinase activity, protein binding, protein serine/threonine kinase activity, kinase activity, protein binding
SNP Position Effect Amino acid change
T/A 90642064 5_prime_UTR_variant
A/T 90642203 missense_variant p.Asn19Tyr
C/G,* 90642505 synonymous_variant p.Leu119Leu
C/G 90642578 missense_variant p.Pro144Ala
T/C 90642866 missense_variant p.Ser240Pro
T/A 90643040 missense_variant p.Ser298Thr
A/G 90643225 synonymous_variant p.Lys359Lys
A/G 90643354 synonymous_variant p.Ser402Ser
T/A 90643369 missense_variant p.Ser407Arg
G/T 90643448 stop_gained p.Gly434*
C/T 90643723 synonymous_variant p.Cys525Cys
G/A 90643750 splice_region_variant&intron_variant
G/A 90643766 downstream_gene_variant
T/C 90643773 downstream_gene_variant
T/C 90644142 synonymous_variant p.Phe609Phe
G/C 90644211 synonymous_variant p.Pro632Pro
G/T 90644217 synonymous_variant p.Pro634Pro
G/T 90644268 synonymous_variant p.Leu651Leu
G/A 90644467 missense_variant p.Ala718Thr
A/T 90644471 missense_variant p.Tyr719Phe
C/T 90644586 synonymous_variant p.Tyr757Tyr
G/T 90644617 3_prime_UTR_variant
A/G 90644618 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06102.1
MTLFCQPLIISLLLLLAVNHSSGLTRDGVLLLSFKYAVLNDPLYVLANWNYTDQTPCSWNGVSCSTVPATNGTEYRVTSLSLPNSQLLGSIPSDLGSIEHLQVLDLSNNSLNGSLPSSLSQASELRFLNLSNNLITGEVPQSIPQLQNLQCLNLSDNALAGKLPHDLSDMHNLTLASFKNNYLSGFLPSGLRTLQVLDLSSNLFNGTLPADFGGDAMRYINISYNRFFGEIPMEFAANISGNATVDLSFNNLTGQVPDSAVFLNQNWKSFSGNVNLCGEQTKNVCPVPSSSSSKPNISAPISPPAIAAIPRTFDSSAAPRGKKGSGLKRGTIIGIVVGDVIGIAILGMIFAQVYRLKKKKEVVKKEAVVRSGSGSESESSWESRRFMRWSCLSKRAEDEECSETRSSCDSEVEGQKPKGPQQEEKTGTLVIVDGERQLELETLLKASVYILGATGSSIMYKAVLEDGMSLAVRRIGESGVERFKDFQNQVRLIAKLVHPNLVRIRGFYWGHDEKLIIYDFVPNGCLANVRYRKAGTSPTHLPWEIRLKIAKGVARGLTYLHEKKHVHGNLKPSNILLGNDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRDSFQDITYGPSPSPSPSPSSMMGLSPYHAPESLRNLKPHPKWDVYSFGVMFLELLTGKIVVLDDTGQGPGVLTEDKNRALRMVDMAIRADMEGREEALLAYFKLGYSCVSSVPLKRPSMKEVLQVLEKISSSSSSSSYYYSV*


CDS Sequence:
>Vu_06102.1
ATGACTCTCTTCTGTCAACCTCTCATAATTTCGCTGCTTCTTCTCCTCGCTGTTAACCACTCTTCTGGCCTCACTAGAGACGGCGTTCTGTTGCTTTCTTTCAAGTACGCTGTGCTCAACGACCCTCTTTACGTCCTCGCTAACTGGAACTACACTGACCAGACACCGTGTTCCTGGAACGGCGTTTCTTGTTCCACCGTACCAGCCACGAACGGTACCGAGTACCGCGTCACATCGTTGTCGCTTCCCAATTCTCAGCTTTTGGGTTCAATTCCCTCCGATCTGGGTTCCATTGAACATCTTCAAGTCCTAGACCTTTCCAACAACTCCCTCAACGGCTCTCTTCCTTCTTCTCTCTCCCAAGCCTCCGAGCTTAGGTTCCTCAATCTCTCTAACAATTTAATAACAGGGGAGGTTCCCCAGTCCATTCCCCAGCTTCAGAATCTCCAATGCCTAAACCTCTCCGACAATGCTTTGGCGGGAAAACTGCCTCACGATTTGTCCGACATGCACAACCTAACTCTGGCTTCCTTCAAGAACAACTACTTGTCAGGTTTTCTTCCCAGCGGGTTGAGAACGTTGCAGGTTTTGGATCTGTCTTCAAACCTGTTCAACGGGACTCTTCCCGCGGATTTCGGCGGAGACGCCATGCGTTACATAAACATCTCCTACAACAGATTTTTCGGCGAAATCCCGATGGAGTTCGCAGCAAACATTTCCGGAAACGCCACCGTCGACCTTTCGTTCAACAACCTCACCGGCCAAGTTCCCGACTCCGCTGTGTTTTTGAATCAGAACTGGAAATCTTTCTCCGGTAACGTCAACCTGTGTGGAGAACAAACGAAGAATGTGTGCCCTGTTCCTTCTTCGTCGTCCTCTAAACCGAATATTTCTGCTCCTATATCTCCTCCTGCAATCGCGGCAATCCCGCGGACGTTTGATTCTTCGGCGGCGCCTAGGGGGAAAAAAGGGAGTGGTCTGAAGCGAGGAACGATTATAGGAATCGTTGTGGGAGACGTAATTGGGATAGCGATCCTTGGCATGATATTCGCGCAGGTGTACCGGTTGAAGAAAAAAAAGGAGGTGGTGAAGAAGGAGGCGGTTGTGAGGAGTGGAAGTGGTAGTGAGAGTGAGAGTTCGTGGGAGTCTAGAAGGTTTATGAGGTGGTCGTGTTTGAGTAAGAGAGCGGAAGATGAAGAGTGTTCAGAGACAAGAAGCAGTTGTGATAGCGAGGTGGAGGGGCAGAAGCCAAAGGGTCCTCAACAGGAGGAGAAAACGGGGACTCTTGTGATTGTGGACGGAGAACGACAGCTTGAACTGGAAACGCTCCTGAAGGCTTCTGTGTACATATTGGGTGCGACGGGGTCCAGCATAATGTACAAGGCTGTCTTGGAAGATGGTATGTCCTTGGCGGTTCGGAGAATCGGGGAGAGCGGTGTGGAGCGGTTCAAGGACTTCCAGAACCAGGTTCGACTTATTGCTAAACTGGTGCACCCTAATCTGGTTCGCATTCGAGGCTTCTACTGGGGACACGATGAGAAACTCATCATCTATGATTTCGTTCCAAACGGTTGCCTTGCCAATGTTCGTTACAGGAAGGCGGGCACCTCGCCGACTCATTTACCGTGGGAAATCAGGCTGAAGATAGCGAAAGGGGTGGCACGTGGACTGACTTATCTCCACGAGAAGAAACACGTGCATGGAAACTTGAAGCCTAGCAATATTCTGCTGGGCAATGACATGGAGCCCAAGATTGGAGACTTTGGGCTTGAGAGGATAGTCACCGGTGACACCAGTTATAAGGCTGGCGGATCGGCGCGTATTTTTGGGAGCAAGAGATCCACGGCCTCCCGGGACAGTTTTCAGGACATTACCTATGGGCCAAGCCCGAGCCCGAGCCCGAGCCCTAGTTCCATGATGGGCTTATCTCCTTATCATGCTCCCGAGTCGCTGAGGAACCTGAAGCCTCACCCCAAGTGGGACGTGTACTCTTTTGGGGTCATGTTTCTTGAGCTTCTAACGGGGAAGATTGTGGTTTTGGATGATACGGGCCAAGGGCCTGGGGTTTTGACGGAGGATAAGAACCGGGCCTTGCGTATGGTTGATATGGCTATCAGGGCCGACATGGAGGGGAGAGAGGAGGCCCTGTTGGCCTACTTCAAGCTAGGGTATAGTTGTGTGTCTAGCGTTCCACTTAAAAGGCCTTCAATGAAAGAGGTGCTACAAGTTCTTGAAAAGATCTCATCCTCCTCTTCTTCCTCCTCATATTACTATAGCGTCTAA


Promoter Sequence:
>Vu_06102::LG1:90639781-90641781(+)
TGATCCGTTCATTGGGGGAAGCGAAGATGTAAATAAAAGGCTTGTGAACTGCATTCTTTTTGCTCCATGTTGATGAAGAAAAGGTAAAAACAAACATTATGTTGCCAGGCGCCACTAATCAGTAAAGTGTTATATTCCTCAATGAATAGTCAAATTTCCTTTTGGCCCTTAATCATTGAACACCAACTTAAAGGCATAGGGAGCACAATCTTTTCACAAAGTTTTAGATCACCTAAAGATGTCTCCAATGAAAATTATGCATTTTTTCATTCTCTTTTTAAAGTTTTTCTTTTTCCTCTTAGCATGGAGTTGGTAGATTACTAAAAATGTTCACTAATCTTTGCTTGAATCTTGGATGGGGTTGGTTGAGCATAAGCATAGATGCACACGTTACTTTCATAGTTTAGTGGAGTATGATGGGTGTGCTTGTTTGATCTAATTACCATGAGCGTTGGTTTGTTGCATCTTATTAGATCATCTATCGAGCGTCCATTCTGAGCTTTCTTGAAGCAATTGTTTTTTGGTGATCTGCCATGACCCCAACCTTCTCCATTCTTGCATCTTTTCTTCTATACGGAAAGAGAACGTGTATTAAAGAAAAGCAAAACGTATATGCTTTAAGTGCCCTTTTAACCTTTTATCCTTATAGCAAAGAATAAAAGGCTTGATCTTAATGAAAAATAATTAAAGGAGCGTTTACTATTAATAGGCCCAGAAAGTAAAAGTCACACAAACTTTAGTCTACATCATGTTTGTGAAATTTCCACCATTTAAAGCAGGTACAAGACCTTTTGAATCTCGTGTTTGATTAATTTTTAAAAGGGCAATTAAATGTCTACTTTGGTACCTTTTTGGATTTTTAAATTAGAGGTCAGTAAAGCTGACAACAAATGTTAAAAATGCAGGAGCCAAGCTAATAAAGAACAAGATTACAGTTTAGGTGATAATGCGTTCCCATGTGTGATCTGAAACCCGATCAATCATCCATGTTTGGTTCCTTATAATGTCTGAAACGAATAAGCTGTTCTGTACTAGGCTGCAATGCAAGCCCAAAATTGTGACCTAAAATTCAGATTGGTGCTACCTTGCAATTGCAAATAATCTAATCGCGAATCTACAGTATCTGCCATTGTTTCACAAAAGATGTATACAGACAGAAAGGGGTCCGTTTGATTTTTTGTCCACCGTCAAAATGAGGATGCCTCTTCCTTAGACTTCTTGTACTATATAGAATATTATTTTATTATGATCTAGTGCCAGTAGAATTATCTGCGAGCAATCTTCATCAAGGTCATGGATTATTATGGTTCATGGACAACTGTGAGAAAAAAAACAAGACTGTTCCCACGGTCATTTGATGTGGTACTATGTATTTACTGTCCCCCTAGATAATTAATGGGGCCATATCTTCTCGTTCTCGCGGTAATGAAATTCAATGCGAATGGTCCTTCATACATGCCATCACGCACGCCTATATTTTTCGTGACTGCCACTCAAATTTAAAACTGGGGACATTGAATTGAGATCAAAGATCAAAATTTTCCCAATTTTTTTCGCTTGAATTAATTAATCTAATAACGACGACGACGTTGCGACGGATGGTAGGATTATGTTTTTGGGACCTTCAATAATGGCACGAAACATAGCTATATGTTTTTCCGATAGATAAATTATTACATTGAAGAAAGATACTGTTGTTATTTCTGTTTCTCTTTTTAAAAACATTTTCCATTGGTTCTCGGTCTTTTTTGGCGAAGGTGAAAATGATGGTATCCAGTGGGAAAAGATAGACTTGGTTTGCCGTAGAATTGAATTGTTTTGATTTCTCCCATTCCTTAACCAAAACAGCAATAAAGAAGAAAAAACAAATGACAGCTTGTCCATTTAGGTAGAATAAAGTAGCCAGTTATTTTAATTGGTAAAGCTTTAATTAAGAGTAATATTAAATAGTGAACAGACGAAGACGTAATTATATTGACACAGGAATTGGATCATTGGAG


Gene Sequence:
>Vu_06102(+)
GGGCTTGTGAAGTCAATCAGGCAGAAAAAGGTTTGCATTAACTAAATTTCCAACTTCACCTGCATGTCTAGTAGTAGTAGAAAAAGATGCTATGCACAAGCATCGCTTTACATGTAGTACTAGGAAGAGAGAGAAGAGAAGTGATTAAGCAATAAACTATTTGGAGTTCAACCATAAATCGTAGCAAGCAGCGTAGGAGCATATTTGTAAGAGGTTCCGTCTTTGGTGAGCTGTGTATGTCCTTCAACCATTTTTTTTTTATATTCCATCCATCCACATGGCCTTCCGTCCCATCGCAATAAATCACCGTTACACCTTTCCCTCCTCTTTCTCCCTCCGTCAGCAATGTGGGATTACTCTGTAAAATCATGACTCTCTTCTGTCAACCTCTCATAATTTCGCTGCTTCTTCTCCTCGCTGTTAACCACTCTTCTGGCCTCACTAGAGACGGCGTTCTGTTGCTTTCTTTCAAGTACGCTGTGCTCAACGACCCTCTTTACGTCCTCGCTAACTGGAACTACACTGACCAGACACCGTGTTCCTGGAACGGCGTTTCTTGTTCCACCGTACCAGCCACGAACGGTACCGAGTACCGCGTCACATCGTTGTCGCTTCCCAATTCTCAGCTTTTGGGTTCAATTCCCTCCGATCTGGGTTCCATTGAACATCTTCAAGTCCTAGACCTTTCCAACAACTCCCTCAACGGCTCTCTTCCTTCTTCTCTCTCCCAAGCCTCCGAGCTTAGGTTCCTCAATCTCTCTAACAATTTAATAACAGGGGAGGTTCCCCAGTCCATTCCCCAGCTTCAGAATCTCCAATGCCTAAACCTCTCCGACAATGCTTTGGCGGGAAAACTGCCTCACGATTTGTCCGACATGCACAACCTAACTCTGGCTTCCTTCAAGAACAACTACTTGTCAGGTTTTCTTCCCAGCGGGTTGAGAACGTTGCAGGTTTTGGATCTGTCTTCAAACCTGTTCAACGGGACTCTTCCCGCGGATTTCGGCGGAGACGCCATGCGTTACATAAACATCTCCTACAACAGATTTTTCGGCGAAATCCCGATGGAGTTCGCAGCAAACATTTCCGGAAACGCCACCGTCGACCTTTCGTTCAACAACCTCACCGGCCAAGTTCCCGACTCCGCTGTGTTTTTGAATCAGAACTGGAAATCTTTCTCCGGTAACGTCAACCTGTGTGGAGAACAAACGAAGAATGTGTGCCCTGTTCCTTCTTCGTCGTCCTCTAAACCGAATATTTCTGCTCCTATATCTCCTCCTGCAATCGCGGCAATCCCGCGGACGTTTGATTCTTCGGCGGCGCCTAGGGGGAAAAAAGGGAGTGGTCTGAAGCGAGGAACGATTATAGGAATCGTTGTGGGAGACGTAATTGGGATAGCGATCCTTGGCATGATATTCGCGCAGGTGTACCGGTTGAAGAAAAAAAAGGAGGTGGTGAAGAAGGAGGCGGTTGTGAGGAGTGGAAGTGGTAGTGAGAGTGAGAGTTCGTGGGAGTCTAGAAGGTTTATGAGGTGGTCGTGTTTGAGTAAGAGAGCGGAAGATGAAGAGTGTTCAGAGACAAGAAGCAGTTGTGATAGCGAGGTGGAGGGGCAGAAGCCAAAGGGTCCTCAACAGGAGGAGAAAACGGGGACTCTTGTGATTGTGGACGGAGAACGACAGCTTGAACTGGAAACGCTCCTGAAGGCTTCTGTGTACATATTGGGTGCGACGGGGTCCAGCATAATGTACAAGGCTGTCTTGGAAGATGGTATGTCCTTGGCGGTTCGGAGAATCGGGGAGAGCGGTGTGGAGCGGTTCAAGGACTTCCAGAACCAGGTTCGACTTATTGCTAAACTGGTGCACCCTAATCTGGTTCGCATTCGAGGCTTCTACTGGGGACACGATGAGAAACTCATCATCTATGATTTCGTTCCAAACGGTTGCCTTGCCAATGTTCGTTACAGTAAGTCGTTTCCATTTTCCTCTGATGCTTTGCTCGCTGTTTTACATCAAAATAATTTCTTTCTTGGTTTCTATGTTTTTCTCAATGCATTTGGTGCACCAACTTTGGTCAATGTTACGTTATTTATGATAAAAGTAAAAAATTGTGTGCTTGGAATGTATAATCAGGGAAGGCGGGCACCTCGCCGACTCATTTACCGTGGGAAATCAGGCTGAAGATAGCGAAAGGGGTGGCACGTGGACTGACTTATCTCCACGAGAAGAAACACGTGCATGGAAACTTGAAGCCTAGCAATATTCTGCTGGGCAATGACATGGAGCCCAAGATTGGAGACTTTGGGCTTGAGAGGATAGTCACCGGTGACACCAGTTATAAGGCTGGCGGATCGGCGCGTATTTTTGGGAGCAAGAGATCCACGGCCTCCCGGGACAGTTTTCAGGACATTACCTATGGGCCAAGCCCGAGCCCGAGCCCGAGCCCTAGTTCCATGATGGGCTTATCTCCTTATCATGCTCCCGAGTCGCTGAGGAACCTGAAGCCTCACCCCAAGTGGGACGTGTACTCTTTTGGGGTCATGTTTCTTGAGCTTCTAACGGGGAAGATTGTGGTTTTGGATGATACGGGCCAAGGGCCTGGGGTTTTGACGGAGGATAAGAACCGGGCCTTGCGTATGGTTGATATGGCTATCAGGGCCGACATGGAGGGGAGAGAGGAGGCCCTGTTGGCCTACTTCAAGCTAGGGTATAGTTGTGTGTCTAGCGTTCCACTTAAAAGGCCTTCAATGAAAGAGGTGCTACAAGTTCTTGAAAAGATCTCATCCTCCTCTTCTTCCTCCTCATATTACTATAGCGTCTAAATCATGATTTGTCACAGGGATTTTTGTAGAAAGAAAACAAATAATGTACTTATCATTGACTAATAGGTTTTTGTATTTGATTCAATGTTGCGTGTTCTAATTGTGCTCTCTGTTAATTCATTTGCTAATTTTCAAGAAATATATTCTATCTTAATTTCTTTT