Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06073 LG1 90142497 90145741 PREDICTED: transcription factor SPATULA-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 90142666 downstream_gene_variant
G/A 90142750 synonymous_variant p.Asn280Asn
T/C 90143020 synonymous_variant p.Gln219Gln
A/C 90143089 synonymous_variant p.Ser196Ser
G/C 90143261 downstream_gene_variant
A/C 90143436 downstream_gene_variant
G/A 90143651 downstream_gene_variant
C/G 90143831 downstream_gene_variant
C/T 90143922 downstream_gene_variant
G/A 90143934 downstream_gene_variant
G/A 90143936 downstream_gene_variant
A/G 90143937 downstream_gene_variant
G/A 90144021 downstream_gene_variant
C/A 90144199 downstream_gene_variant
G/A 90144369 downstream_gene_variant
T/A 90144373 downstream_gene_variant
G/A 90144605 synonymous_variant p.Asp151Asp
C/T 90144646 downstream_gene_variant
A/C 90144655 downstream_gene_variant
T/A 90144943 downstream_gene_variant
C/T 90145330 missense_variant p.Val97Ile
A/T 90145363 downstream_gene_variant
A/T 90145367 downstream_gene_variant
A/G 90145464 splice_region_variant&intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06073.1
MSSSSSSTHHQISLPLPHTLLPSSFTTPQGNPPRNPIPISMLRFCTSKTAQHNALRDGISPYNPSSATQVFSSSLPLNTHNETDDYDCDSEECEALVEEVPIPPKCFRSGSSSKRSRAAEVHNLSEKRRRSRINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMFFPEALQPQQLSQIRMDSSEENRSMPYSSNMPNKQIVADQPSMSTPSYIFNSETSFRLESHISDNIRSFQHTGFSEICREDILQHQHLNANNSDTNPLVSSQGALATASVSFDMQKSAVKDSSSLGNCIPGSDQSRLVLRNNEPTLF*


CDS Sequence:
>Vu_06073.1
ATGTCTTCTTCCTCCTCTTCCACACACCACCAAATCTCGCTTCCCCTTCCTCACACTCTTCTACCTTCTTCCTTCACAACCCCACAGGGTAACCCCCCACGCAATCCCATCCCCATCTCCATGCTTCGCTTCTGCACCTCCAAAACTGCACAACATAATGCACTACGAGATGGGATCTCGCCCTACAACCCTTCTTCTGCTACCCAAGTCTTTTCTTCCTCGCTGCCTCTCAATACTCACAATGAAACCGATGACTACGACTGCGACAGTGAGGAGTGTGAAGCGTTGGTAGAAGAAGTTCCAATTCCACCCAAGTGCTTTCGTTCTGGGAGTTCATCCAAAAGAAGCAGAGCGGCGGAAGTTCATAACTTGTCTGAAAAGAGGAGGAGGAGTAGGATCAATGAAAAATTGAAGGCTTTGCAAAATCTAATTCCAAATTCCAACAAGACTGACAAGGCTTCGATGCTTGATGAAGCTATTGAATACCTCAAACAGCTTCAGCTCCAAGTACAGATGCTGTCAATGAGAAATGGGTTGAGTTTGCATCCTATGTTCTTTCCAGAAGCATTGCAACCCCAGCAATTGTCTCAGATAAGAATGGATTCAAGTGAAGAAAACAGATCTATGCCCTATTCATCCAATATGCCTAACAAACAAATTGTGGCAGATCAGCCATCCATGTCCACCCCATCATATATATTCAACTCAGAAACTTCTTTTAGACTGGAATCTCATATTTCTGACAATATAAGATCATTTCAACACACAGGTTTTTCTGAGATATGCAGAGAAGACATATTGCAGCACCAACATTTAAATGCAAACAATTCAGATACCAACCCATTAGTTTCTTCTCAAGGCGCATTGGCTACAGCATCAGTTTCCTTTGATATGCAAAAATCTGCAGTTAAAGACAGCAGCTCTTTAGGAAACTGCATCCCTGGAAGTGATCAATCTAGACTGGTGTTGAGAAATAATGAGCCAACATTATTCTAA


Promoter Sequence:
>Vu_06073::LG1:90145741-90147741(-)
TACATTGCCTCCTCAAATCTATCAAGCAAACATCGTTTCATTGACCATCTCTGAAACTCCTATTCCTTCCAGATTGGTCTTTTTTCATTTATTTTCCGAGAATAATAAATTTTGAAAAGTTCCTACAAGTTATGTTTGGTATTTTTTTTAAGTCTAGTCTGAAATAAAGTATTTGGCTTGATTTATTGCACTAAAAAGTATTAATTGAGGCAGATAGAGCACCCTGAACTATTCGAGACATCGCGATTCACGGGCCTGAGTCTTGAAACGATAACTCAATACATGGAGCGTCAAACTTTCTTGGCTGTTGATGGAGATGATTCAGAACAAAATAAAGAAAGATGTCCCGTTTGTCTGGTCAGTCATATACATTTTCATTCATTCTTCATAACTCCTTTCGTATGGAATTTGTGTTCGTGTTCACATGTTGTATTAATTTTTCTATTACAACGTTTATAGGAAGAATTTTGCAACGGAGAGGATATTGGGAAGCTGCATTCTTGCGTGCACAAGTTTCACTTTGATTGCATCAAAACTTGGCTCAACCACAGGAACCGTTGCCCCGTCTGCAGAAGAACTGGGTTGGAAACGTCTAATGAGCAAAATGTAGGAGGTAAAGCAGCAGATGCAGCTGTGGTTCACGATGAAGGTGACAGTCAATAGTTCCTCACTGTAACTTCTAAAGACTGTGATTTCAACTTTCGTTTTCCTCCATGGAACAAACTTATGGATGCAGAGACCGCGTACTTCATTCTTGTCGACAAATGAACTTAAACTCATGCAAGACTACTTTTTCTTTTCTTTTAAATGGATGTTTTTATGGTACTTGGACTTAGGATGATATTGGCAAAGTCATTCCAAGCTCCAACGGATAATTATTTGGTTGTTGCTTTGCAGTTTGCAATAGTTTGATCTGCACCAAAGGTATCGACTAGTTTTTTTTTCCCTGTGGAAGCGTATAACTTTGATAATAGTCGTAGAAACTGGCTTTGGTTGATTCTGGTAATAACTATGAACTGTTTTCTATTAGATCTTTAGACACGTGCACCTCTTTTTTCTCACAAAAGTTAACACTGTTTTTTCAGTTTATGGTAGTTTAGAGGCGGTGACAAAACAGTTAAAAATGGGGGATAGGAATTGGTTTAGGCATTTGGTAATAATCCCTCTTTTGTGAGATTTTTTTACGTTATATTTTTCGAAAATAATTTTTTATGGGTATTGGAAAAAAAAGATATTTACTTGCCAATAGCTACATGCCAACCCCAGTTTTTAAAGAATTGTGTGAAGAAATGTGATGGGATAGTAAGTTCAAATCCAGTTAATTGGGCTTTACATAGGTACGGGCTACCAAAGCCCAATAATTATAGTGGCTTCCTTGTTTTATTTTGAATCAGCCCACTAAGGCCTTCATCGTGTTGTGTGCTACATAATTAGTACTGCCACGCCAATTTGTGAGATTTATATTTCAATCTATTAAATGCATGAGCTATATATAACACCCTCCTCCACTGCTATTCAGACCCTCAAGATGTCGTATTATTTATGTTAACGAAAAGGACCCAAAGAAATAACAGATAACTACTTGTAATTCCTTTTACATACTTTGGTAATTTAATAGAATAAAAGCAATTGTTGTGTATGAGTATGTGGAGGGGGAAGTGATGGAGTTGGAGATAATCGCTGTTATGGCGCGTGGCACTGTGGGTAGTGTGAGCGAACCATACTTTGGATCCGAAACAGTTCACAATTCCCCATGTCATACGTCACATCCTTCCTTTGTAAAACCTTTGGTTCTTTTCTTTTCCATCGGTTTCTCAAACCAGCCACCTCCATTATCCGCTTTACATTAACAAACACAAACGTAAACATTTGCCTCTGCAACCAACACCCAATCACCAACGATCCAAAAAGAAAAGTGCTAACGCTCCTTTGACCTTTTCGCTCCTACCTTAAACCAAAACAATTCCACATTGTTCTACAAAACAAAAAGGGATAATACC


Gene Sequence:
>Vu_06073(-)
ATGTCTTCTTCCTCCTCTTCCACACACCACCAAATCTCGCTTCCCCTTCCTCACACTCTTCTACCTTCTTCCTTCACAACCCCACAGGGTAACCCCCCACGCAATCCCATCCCCATCTCCATGCTTCGCTTCTGCACCTCCAAAACTGCACAACATAATGCACTACGAGATGGGATCTCGCCCTACAACCCTTCTTCTGCTACCCAAGTCTTTTCTTCCTCGCTGCCTCTCAATACTCACAATGAAACCGATGACTACGACTGCGACAGTGAGGTGTTGCTTCCACTTTCTCATATTTCTCCTTGTTCGATATTCTTTATATTATTTTTATTATTATCATTATTGTAGTCTTGCGGTGTGCTGTATGTTCTTATTATATGAACATTCTCAATGTAGGAGTGTGAAGCGTTGGTAGAAGAAGTTCCAATTCCACCCAAGTGCTTTCGTTCTGGGAGTTCATCCAAAAGAAGCAGAGCGGCGGAAGTTCATAACTTGTCTGAAAAGGTTTGAATTTTCTTCTCGTAATTACGTCGAAAAGTGGGGCAGCTGCACTACACCTGCATTGCACCCCCTAAGATAAGAAACCTCTTCACGTATTTTATTAAAGATAGTTTGAAATCAAACTTACAGAAAATTTATAAGTTGTATCCCAAGGTGGCAGGCAACCTGCCTGATCTGATGCCCGGCCAAGGTTTTATGAATATATATTTCATTAATTTAGTCTCCGAAATTGTCAAGGTTACAACAGTTTTGTCCTGACAATTTTGTAAAGAAGTCACTTCCCAAATGTCACAAAGGAAGGACTAATTTGTCATGAATTTGCTACATTCGGGTAAATGCAACTTCACCTCTGATAAAATCATCTGGTTCCGCTACTGTATGGTGGTTGGCTATTTTGTGTGTTTGGGTTTGGGTTTTTATTCATGGCCGAGTAATTTTCATTTCTGGCTTTTGTGTCTGGTGCGGGGTTTGTTGAGAGCAGAGGAGGAGGAGTAGGATCAATGAAAAATTGAAGGCTTTGCAAAATCTAATTCCAAATTCCAACAAGGTACACTGGTTTCTTCTACAATGTTTGATTAGCGTGCTTCACGATTCGTTGTTCTTTGACTGTGGAGGATTGTTGTGTGGCAGACTGACAAGGCTTCGATGCTTGATGAAGCTATTGAATACCTCAAACAGCTTCAGCTCCAAGTACAGGTCTGTTTCTCTTTCCGTGTCTTTCATTATTATTCCAATTCCTTTTCGGGGCGTAATTTATTCTTGAACATTCTTTCTTAGATTGCAATTACATGAAGTTACAAATCATGAGTAATGATATCTTAGTTATTTGTTTTTATAAGAAACGTTGGATACTTCTGTGATCATGTCATGTCACTAGATATGATTGCAAGGTCTAATATCCACACTAATTTAAACCTTTGAATTTTGAGGTATGTCTGCAATAACAACTGGCATAAATTATAAGAACTTTTGGAAAGGACTTTTATGGAATCTTGCTGAAGATACCTTTAATAACATCCTTAAAAGAACATAAGAAATTGTGATGCATTTAGTTACTCGAACACATACCAAAATTGACGCTTCACTATAAATTAACTTGATTATAACTAATATTCAGTTAAAATAAGCTTTTAATCTCTATCATATCCCCAAATTTTTTAAAAAAAATATATGTGTATGTATGTATATTGTGTGTGTGTCCCAATTTGAATTTAGGATACGATACATCATGATCCATTGACAAAATTTATAAAATATTTGATATAAATATAGAATACTTATAAGTAAAGAGACATTGATGTTTTCTCTATTAATTTATGGCTACAATATCAAATTTACAAAAAAGAATAAAACATTTGTGATCATAACAAAACAATTTTAACTTTTGTTTATATCGCAATCAATCTTGAGTAACTATAATTTCACTAATGTTCTTCAATTTTTGTCTCTATTTTTTATGCAATAATACCCGTAATCTTTTTCAGACAAAAGTAGATGGTTTAGATACTATTTGAAAGTATCTTATATCATATCCTAGAAAAAATTAGAAGGAAAAAGATTGGATACCTTTTGGACACGTAAGAAGTATTCCAAAAGTACCAAGAAGTATTGGAAAAAGAATAAAAATATATTGAATATTTTTTAGATATATATTTGGAAGTAACCGAGGAGTATCAGTGTCTGACACTGGTACGATAGGTATACTTTTCCATTTTTGAAGTATCCGAGTTTAATAAATAAAAAACTACAGCAATTTACAAAGTGATGATCATAGTTATGCTTGTTATGTTTTGTTGTGCAACATTGCCATAATATATGCTCTGCAGAGTGATCAGAGTATTGAAGAATCATAAAATATAGTGTATTTAGTACAAGTTGATACTTTTGTGAATAACATTATACTATGTTGCGATGCACACATCATGCATCAGGAAATACTCGAATTATATTCTTGATATGGATCTCCTCTTTTACCAAAACCCACTGTTATGTGCTGACAATTAAATTTTGAGCATGTTAAAGGGAAAGGAGAAATACTGCTCAGCTTGTTTCTAATATGGTTTTATGGTAATAGCAGATGCTGTCAATGAGAAATGGGTTGAGTTTGCATCCTATGTTCTTTCCAGAAGCATTGCAACCCCAGCAATTGTCTCAGATAAGAATGGATTCAAGTGAAGAAAACAGATCTATGCCCTATTCATCCAATATGCCTAACAAACAAATTGTGGCAGATCAGCCATCCATGTCCACCCCATCATATATATTCAACTCAGAAACTTCTTTTAGACTGGAATCTCATATTTCTGACAATATAAGATCATTTCAACACACAGGTTTTTCTGAGGTTAGCTCACTTTTTAGTTACATATGCCCAGTTAAAAGTATAACGGTATTCATTTTTAAATTTTTTCCCTTTTAATTTATAAAACAGATATGCAGAGAAGACATATTGCAGCACCAACATTTAAATGCAAACAATTCAGATACCAACCCATTAGTTTCTTCTCAAGGTCTCATTTTTCTTTCCAGAGAAATTATCGTAGCTCTTTCATTGGGAAATAACAATCTCGTACTGATTGAACTGTTCCCTCCTTAAAATTGAATCAGGCGCATTGGCTACAGCATCAGTTTCCTTTGATATGCAAAAATCTGCAGTTAAAGACAGCAGCTCTTTAGGAAACTGCATCCCTGGAAGTGATCAATCTAGACTGGTGTTGAGAAATAATGAGCCAACATTATTCTAA