Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06027 LG1 89508699 89511726 PREDICTED: probable disease resistance protein At5g66900
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 89508758 synonymous_variant p.Phe20Phe
A/T 89508982 upstream_gene_variant
T/C 89509303 missense_variant p.Leu168Pro
A/G 89509305 missense_variant p.Lys169Glu
G/C 89509424 upstream_gene_variant
C/G 89509428 upstream_gene_variant
T/C 89509441 upstream_gene_variant
G/A 89509462 upstream_gene_variant
G/T 89509463 upstream_gene_variant
C/T 89509467 upstream_gene_variant
C/T,* 89509478 upstream_gene_variant
T/G 89509512 upstream_gene_variant
T/G 89509528 upstream_gene_variant
G/A 89509539 upstream_gene_variant
A/G 89509541 upstream_gene_variant
C/T 89509554 upstream_gene_variant
A/G 89509560 upstream_gene_variant
T/C 89509565 upstream_gene_variant
G/A 89509574 upstream_gene_variant
T/C 89509584 upstream_gene_variant
T/C 89509594 upstream_gene_variant
T/G 89509611 upstream_gene_variant
G/C 89509621 upstream_gene_variant
T/C 89509624 upstream_gene_variant
C/T 89509628 upstream_gene_variant
G/A 89509707 upstream_gene_variant
C/T 89509752 upstream_gene_variant
C/A 89509767 upstream_gene_variant
T/C 89509786 upstream_gene_variant
C/T 89509792 upstream_gene_variant
G/T 89509794 upstream_gene_variant
A/T 89509815 upstream_gene_variant
C/A 89509851 upstream_gene_variant
C/T 89509861 upstream_gene_variant
T/A 89509891 upstream_gene_variant
G/T 89509932 upstream_gene_variant
G/T 89509954 missense_variant p.Arg204Ile
G/T 89510042 synonymous_variant p.Gly233Gly
G/A 89510274 missense_variant p.Asp311Asn
C/T 89510625 synonymous_variant p.Asp362Asp
C/G 89510639 stop_gained p.Ser367*
G/C 89510667 missense_variant p.Leu376Phe
T/C 89510713 synonymous_variant p.Leu392Leu
G/A 89510716 missense_variant p.Asp393Asn
G/A 89510742 synonymous_variant p.Lys401Lys
C/G 89510752 missense_variant p.Pro405Ala
C/A 89510875 upstream_gene_variant
C/A 89511015 missense_variant p.Pro451Thr
G/A 89511073 stop_retained_variant p.Ter470Ter
A/G 89511075 missense_variant p.Thr471Ala
T/C 89511137 synonymous_variant p.Leu491Leu
G/A 89511139 missense_variant p.Cys492Tyr
C/T 89511145 missense_variant p.Thr494Ile
G/A 89511558 missense_variant p.Val632Met
C/G 89511567 missense_variant p.Pro635Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06027.1
MEETAQQMKRPFGIPEKPEFSVGLDVPLKKLKLNVLSEGASVIVLTGLGGSGKTTLATMLCWDEQVIGKFKENILFVTFSKAPQLKIIVERLLERFGYQVPELQSDGDAIDQLVLLLRKINANPMLLVLDDVWSCSEAVVEKLKFQISDYKILVTSRIAFPTFGTSLVLKPLVPEDAITLFRHHAFLKRASSNIPDEDLVQKVVRHCKGLPLAITVIGRSLSHQSIELWQKMVGELSEGHCILDSNTELLSSLQKILDVLEDNPIIKECFMDLALFPEHQRIPVAALVDMWVELYGLDNYGLKAIAIVNRLDSMNLANVTVTRKNLSDTDSYYYNNHFIVLHDILRDLAIYQSNKAQIELRKRLMIGINETKPEVCLGEKQQGIMIRTLSNNFRWCDEQKTQEIPSGTLSISSDETWTSYWSHLRPAQAEVLILNIRTNQYSFPKYLKEMSNLKVLIVMNYGFHPCELFDFELLGTLSVLKRLRLERISIPSFVSLKNLKKLSLYLCDTREAFENSNILISDAFPNLEDLNIEYSKDMVGLPKGLCNITSLNMLSISNCHKLSALPQEIGNLENLKLLRLSSCTDLQVIPNSVGRLSNLRHMDISNCINLPNLPEEFGNLCNLRILYMTSCERCELPSSIINLKNLKEVVCDEETAFQWEAFKPMLPNLKIDVPQLDVNLNWLHAIHS*


CDS Sequence:
>Vu_06027.1
ATGGAAGAGACAGCACAACAAATGAAGCGTCCATTTGGAATTCCTGAAAAGCCAGAATTTAGTGTTGGTTTGGATGTACCATTGAAGAAGTTGAAACTGAATGTTCTGAGTGAAGGTGCGTCCGTAATTGTGTTGACCGGTTTGGGAGGATCGGGGAAAACCACTCTGGCCACAATGCTCTGTTGGGATGAACAAGTCATAGGTAAATTCAAGGAAAATATTTTATTTGTCACCTTCTCAAAAGCGCCCCAGCTGAAAATTATTGTAGAAAGATTATTGGAACGCTTTGGATATCAAGTGCCAGAGCTTCAAAGCGATGGAGATGCAATTGATCAATTGGTACTTTTGCTGAGGAAAATTAATGCAAATCCAATGTTGTTAGTCCTGGATGATGTTTGGTCTTGCTCAGAAGCCGTTGTTGAGAAACTTAAATTTCAGATATCAGATTATAAAATTTTGGTGACTTCAAGGATTGCATTTCCTACATTTGGAACTTCACTCGTCTTAAAACCTCTTGTTCCTGAAGATGCAATAACCCTTTTCCGACACCATGCTTTCTTGAAAAGAGCAAGTTCAAATATTCCTGACGAAGATCTTGTCCAAAAGGTTGTGAGACATTGCAAGGGTTTACCGCTTGCCATTACAGTGATTGGAAGATCACTGAGTCATCAGTCTATTGAGTTGTGGCAAAAGATGGTGGGGGAGTTGTCAGAAGGTCATTGTATACTTGATTCCAACACTGAATTACTTAGTTCCCTCCAAAAGATCTTGGATGTATTGGAAGATAATCCCATCATCAAAGAGTGCTTCATGGACTTAGCTTTATTTCCTGAACACCAAAGAATTCCTGTTGCTGCTCTTGTTGATATGTGGGTTGAGTTGTATGGACTAGATAATTATGGCCTCAAAGCAATTGCCATAGTCAACAGATTGGATTCCATGAATTTAGCAAATGTCACTGTAACAAGGAAAAATTTAAGTGACACGGACAGTTATTACTATAACAACCATTTCATTGTCCTTCATGATATTCTAAGAGACTTGGCAATTTATCAAAGCAACAAGGCTCAAATTGAACTGAGAAAAAGACTGATGATTGGCATCAATGAAACTAAACCTGAAGTGTGTCTTGGAGAGAAGCAGCAAGGCATTATGATCCGCACATTGTCAAATAATTTTAGATGGTGTGATGAACAGAAAACCCAAGAGATTCCTTCCGGAACATTGTCTATATCATCTGATGAAACTTGGACTTCATATTGGTCGCACCTACGACCAGCTCAAGCTGAGGTTCTGATCTTAAACATTCGAACTAATCAGTACTCCTTTCCAAAGTACCTGAAAGAAATGAGCAACCTAAAAGTTCTGATAGTCATGAATTATGGTTTCCATCCGTGTGAATTGTTCGATTTTGAACTACTTGGCACATTATCAGTCCTAAAAAGATTGAGACTAGAGAGGATTTCGATTCCTTCCTTTGTCTCACTGAAGAATCTTAAAAAGTTATCCCTCTACTTGTGTGATACACGCGAGGCTTTCGAAAACAGTAACATTCTAATTTCAGACGCTTTTCCAAATCTAGAGGACTTGAATATTGAGTATAGCAAAGATATGGTTGGACTGCCTAAGGGACTGTGTAATATCACCTCCTTAAATATGCTCAGCATCAGTAACTGCCATAAGCTTTCTGCATTGCCTCAAGAAATTGGAAACTTGGAGAATCTGAAACTTTTGAGACTAAGCTCATGTACCGATTTGCAAGTGATACCAAATTCTGTTGGAAGGCTTTCAAATCTACGGCATATGGACATCTCAAACTGCATAAACCTTCCTAATTTACCAGAGGAATTTGGTAATCTATGTAATCTAAGAATTCTCTACATGACAAGTTGTGAAAGGTGTGAACTCCCATCCTCAATCATCAATCTTAAGAATTTAAAGGAGGTGGTATGCGATGAAGAGACAGCTTTTCAATGGGAAGCTTTCAAACCTATGCTTCCAAATCTGAAGATAGATGTTCCTCAACTTGATGTAAACTTGAATTGGCTTCATGCAATTCACTCCTAA


Promoter Sequence:
>Vu_06027::LG1:89506699-89508699(+)
ACGCACGTCGTGTCCTCGCATGTCTCCTTCTACATCTCCCTCGTCGAAGACACCGCCTCCACCAACTTCAGCACCTTCTCCATCATCGCTGCTCCCAGCTCCGCCTCCGCTAACAGCCTCGACAATGCCCTCATCGCACTGAGATTCACCAGCTTCAGTTTGTTCCGCTTCGATGCCGAAATCGCGATCAAGCTCGCCAGCGCGATCTCGACTAAGGCGCCGCCGACTTCAGCAATTCTGCAACCACGCCTTCCTTCTCGGCTACTAAAATATTCGACTCAGCGTTCGCAACGATGATCCTAAAAGGTGTATTCTTTTTAGTTTGGGGATATTTTAATTCTAGTTTTCTCTATCTGGTTAAGCTTCTCAATTCTTTGGGATGGACTTTCCAAGGTAACCGGATTACCCAACAATGATGATTTACTGGTTAAGATTTGAAGATTCTGGAATGTATTAACCCCTTAAGTTGTATTAATTTAAAAGTTTAAACATTTAGGCCATTTTTGCTTATTGTTTTCAAAAATAGTATTGGATGAACGAAATTGAGGCACTGATTGTGGTAGCTGATTGACTAATCTCAGTCTTTGCGGTATTTGATGGCTAAGAGAAATACAGAAAAGATAAAATACTTTTGAATGATCTGTGTGAAATCATTGCAACTTCGAAAACCTTAATAGGAAGAGGACACCCAAGGAAGAAGACAATGTTTTAAATTTCACCTAATGCATAATTAAATTCTATCTAATGCGATCTCAGTGTGCCATATCATTAAAATTTGCTTGGTCAGCATGCCATGACTCAATAAATTTTACGCCGTCCACTGAAATTAACGGTAAGATTTCAATTAACTCAATTTTACAGAAATAGGACCTAATTGAGATAAAAAAATACGAAAACCTATTTGAGACGATTCTGGATAAAAACGTACAAAATGATTAAAACAAATATAAAAAATACTTCTCATTTCCTATATTATTTTTGGTGTAATTTTTAATTATTAAATTAAAAAGTGATTCTTTTAAATAATCGCGGCGAATCGACGTACTTCGACCCATAACATTTTTGTTTGAATCAGTGGTCAACCGTCAAATATTGAGAGAGAAAGAAACTACGATGAATAGGGCACAAACACGTTCACTCGGTTGGAATAAATTACCACCAAATCACGACGTAGTTACCGAAACAAATTCTGAGACCAACGGAGGTTATTTCATTTCAATCAGTAATTAAACCTTAAATGAGAAACCTATCTTGTCAATATTTACCTCTTTTTCATGACTAAGCTAAAGCAAAGTAATATTATACTATGAATTTCATTCTTGTAAAACAAGAAATGCATTTGAACAAGTTTTTAAAGCCATGATATTAAAAAATACACGTAAAATAATTAAAGTTTTTGCATTTGCTTAAAATGAAAGGTCTTTCGTCTTTTCTTATTACTATATTTCATCTTTATCGTGGAGGCAAAGAAAAAGTAAAACACGCAACTACGTGTTAGATCAAGACAATTGAACGAACACGACATGCACGCTATAAATATGTCTGCCTTACGATTCAAACCAACCTTTCAACTGCAGTTCACCATACACAAGAACTTCTTTCACAAAACATTCCAAAATTTGACTATCCTCGTAGGTTTGCAGCCCCCGTTGACAAACAGAAAAACATATTCATAGAAAGCATATTTCAATTAAGGTATCGTTTACTGTCGCATTTTATTACTACTATAAGTTTTTTTCATATAGGGTTCAAATATTGAGTTTTCCAGTTCTTCCTAACCAGCTCTCTTGTTAATAATATACAACATACTTTTAGCAAATGAATGGAATAAGCTAACACGAAAAAACTATGCCTTTCCCGTGGCATGGGTTTGGAATACAATGTTTTCTCTTATTATAATGAAAAAAAAAAAAACTTATGCGGCAAAGTTGAGTTTCTCTCCTTAATTCTCACTACTTGATCCTTGTTTATAGAAAGGACTCGAAAAGTTGGTTTGTTCA


Gene Sequence:
>Vu_06027(+)
ATGGAAGAGACAGCACAACAAATGAAGCGTCCATTTGGAATTCCTGAAAAGCCAGAATTTAGTGTTGGTTTGGATGTACCATTGAAGAAGTTGAAACTGAATGTTCTGAGTGAAGGTGCGTCCGTAATTGTGTTGACCGGTTTGGGAGGATCGGGGAAAACCACTCTGGCCACAATGCTCTGTTGGGATGAACAAGTCATAGGTAGGTTCATTTTTTATTCTCCACTATAACAAATATATATTCAACCATAATAACTTCTTCTTATACACTTCTTCTTAAATGAGTCTTTGGTTTTATCCAGGTAAATTCAAGGAAAATATTTTATTTGTCACCTTCTCAAAAGCGCCCCAGCTGAAAATTATTGTAGAAAGATTATTGGAACGCTTTGGATATCAAGTGCCAGAGCTTCAAAGCGATGGAGATGCAATTGATCAATTGGTACTTTTGCTGAGGAAAATTAATGCAAATCCAATGTTGTTAGTCCTGGATGATGTTTGGTCTTGCTCAGAAGCCGTTGTTGAGAAACTTAAATTTCAGATATCAGATTATAAAATTTTGGTGACTTCAAGGATTGCATTTCCTACATTTGGAACTTCACTCGTCTTAAAACCTCTTGTTCCTGAAGATGCAATAACCCTTTTCCGACACCATGCTTTCTTGAAAAGAGCAAGTTCAAATATTCCTGACGAAGATCTTGTCCAAAAGGTGCTTCTTCCTTCTTTCTGACTCTTAGTTAGATTTTTCTATTACTTTTGTTCTTTCGGTTTCTTGTTGATAACTGTTCGACTTTTTTCTTTCGACTTTTTTCTGGTTTTTGTGGTCGAACCGTTCTCTTGTGAGCATTCGACTATGTACGTTCGATTTTTTGTTCTTAGTTGTACTGTTTGGTCTTTGTTGTACTCGGCCTATGTTCGGCCTCTAGTGTTTACGGTCGTTCAGTTTTATTTTTGTCGCTTGGATTGGCTATACATTATAGTCTGTCTTTGTTTTCTAAATGATTCAATCTCGAAATATTCAGATCATTTCTCTCTGTGTTTTCTCTTCTTTCTTTTCTGGGTTTTTTGTTTCTCTGTTTCACACTCGAATTCAACACTGACATTATACAAGTAATCCATACTTGTTAAGCTAAAATTACTATATTTTTTTTGAAACAAAAAATAACATATTTTGACACCCAGAAAGTGCAATATGTAATGCTTGGGTGCCGGAGTCATAGGAAACTAAATTTACTTGCCCTGGAAATGCAGGTTGTGAGACATTGCAAGGGTTTACCGCTTGCCATTACAGTGATTGGAAGATCACTGAGTCATCAGTCTATTGAGTTGTGGCAAAAGATGGTGGGGGAGTTGTCAGAAGGTCATTGTATACTTGATTCCAACACTGAATTACTTAGTTCCCTCCAAAAGATCTTGGATGTATTGGAAGATAATCCCATCATCAAAGAGTGCTTCATGGACTTAGCTTTATTTCCTGAACACCAAAGAATTCCTGTTGCTGCTCTTGTTGATATGTGGGTTGAGTTGTATGGACTAGATAATTATGGCCTCAAAGCAATTGCCATAGTCAACAGATTGGATTCCATGAATTTAGCAAATGTCACTGTAACAAGGTACTGCACAATGACTTCTTATATTTCTTCTCCACTGCTTCATCCTAACATACTCTACAGCACATGAGAGGAATATTTAATACCTTATAAATTGTTCCATAGTTACCTTGTTAACTTGAGAAATTAAACTTGCATTATGTAATTTATAGAGAGCATGGATTCTTATAATGTAATTATGTTCTGCTAATTGATCAGGAAAAATTTAAGTGACACGGACAGTTATTACTATAACAACCATTTCATTGTCCTTCATGATATTCTAAGAGACTTGGCAATTTATCAAAGCAACAAGGCTCAAATTGAACTGAGAAAAAGACTGATGATTGGCATCAATGAAACTAAACCTGAAGTGTGTCTTGGAGAGAAGCAGCAAGGCATTATGATCCGCACATTGTCAAATAATTTTAGATGGTGTGATGAACAGAAAACCCAAGAGATTCCTTCCGGAACATTGTCTATATCATCTGGTTAGTAATGCCTTTCACTAAAGTATAGACATTACATTTAGAAAGTAAAGTTGCTAAAGAGAAAGTCACTATGATCTATCATTTGTTTCTGTTTTACTGCTGACACCATGAGTTGCTTTTGCAGATGAAACTTGGACTTCATATTGGTCGCACCTACGACCAGCTCAAGCTGAGGTTCTGATCTTAAACATTCGAACTAATCAGTACTCCTTTCCAAAGTACCTGAAAGAAATGAGCAACCTAAAAGTTCTGATAGTCATGAATTATGGTTTCCATCCGTGTGAATTGTTCGATTTTGAACTACTTGGCACATTATCAGTCCTAAAAAGATTGAGACTAGAGAGGATTTCGATTCCTTCCTTTGTCTCACTGAAGAATCTTAAAAAGTTATCCCTCTACTTGTGTGATACACGCGAGGCTTTCGAAAACAGTAACATTCTAATTTCAGACGCTTTTCCAAATCTAGAGGACTTGAATATTGAGTATAGCAAAGATATGGTTGGACTGCCTAAGGGACTGTGTAATATCACCTCCTTAAATATGCTCAGCATCAGTAACTGCCATAAGCTTTCTGCATTGCCTCAAGAAATTGGAAACTTGGAGAATCTGAAACTTTTGAGACTAAGCTCATGTACCGATTTGCAAGTGATACCAAATTCTGTTGGAAGGCTTTCAAATCTACGGCATATGGACATCTCAAACTGCATAAACCTTCCTAATTTACCAGAGGAATTTGGTAATCTATGTAATCTAAGAATTCTCTACATGACAAGTTGTGAAAGGTGTGAACTCCCATCCTCAATCATCAATCTTAAGAATTTAAAGGAGGTGGTATGCGATGAAGAGACAGCTTTTCAATGGGAAGCTTTCAAACCTATGCTTCCAAATCTGAAGATAGATGTTCCTCAACTTGATGTAAACTTGAATTGGCTTCATGCAATTCACTCCTAA