Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06025 LG1 89497499 89500858 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 89497588 synonymous_variant p.Asp30Asp
C/T 89497590 missense_variant p.Thr31Ile
C/A 89497600 synonymous_variant p.Thr34Thr
A/T 89497630 synonymous_variant p.Pro44Pro
G/C 89497690 missense_variant p.Leu64Phe
G/T 89497714 missense_variant&splice_region_variant p.Lys72Asn
T/G 89497728 intron_variant
A/T 89497770 intron_variant
A/G 89497807 intron_variant
G/T 89497829 intron_variant
T/G 89497865 intron_variant
G/A 89497870 intron_variant
T/C 89497878 intron_variant
G/A,* 89497899 intron_variant
C/T,* 89497902 intron_variant
A/G 89497903 intron_variant
C/T,* 89497905 intron_variant
A/C,* 89497907 intron_variant
C/T,* 89497910 intron_variant
C/T,* 89497912 intron_variant
A/T 89497917 intron_variant
C/T 89497923 intron_variant
A/T 89497946 intron_variant
T/C 89497955 intron_variant
T/C 89497967 intron_variant
C/T 89497969 intron_variant
C/T,* 89497974 intron_variant
C/T 89497978 intron_variant
T/A,* 89497980 intron_variant
G/C 89497991 intron_variant
G/C 89497995 intron_variant
A/C 89498026 intron_variant
T/C 89498047 intron_variant
T/C 89498054 intron_variant
A/G 89498107 intron_variant
T/A 89498111 intron_variant
T/G 89498112 intron_variant
T/A 89498137 intron_variant
T/C 89498158 intron_variant
T/C 89498199 intron_variant
G/A 89498211 intron_variant
T/A 89498216 intron_variant
G/T 89498219 intron_variant
C/A 89498360 intron_variant
G/A 89498364 intron_variant
A/G 89498403 intron_variant
A/G 89498526 intron_variant
G/C 89498704 missense_variant p.Ser104Thr
T/C 89498705 synonymous_variant p.Ser104Ser
G/C 89498749 missense_variant p.Ser119Thr
C/A 89499009 missense_variant p.Gln206Lys
A/G 89499123 intron_variant
G/A 89499163 intron_variant
A/G 89499352 missense_variant p.Asn244Asp
A/G 89499353 missense_variant p.Asn244Ser
T/G 89499409 missense_variant p.Tyr263Asp
A/G 89499410 missense_variant p.Tyr263Cys
A/T 89499528 synonymous_variant p.Leu302Leu
G/A 89499538 missense_variant p.Gly306Ser
G/C 89499539 missense_variant p.Gly306Ala
A/G 89499556 missense_variant p.Ile312Val
A/G 89499597 synonymous_variant p.Leu325Leu
A/G 89499815 synonymous_variant p.Ser370Ser
C/T 89500062 synonymous_variant p.Val426Val
A/C 89500114 missense_variant p.Thr444Pro
A/C 89500232 missense_variant p.Gln483Pro
T/A 89500236 synonymous_variant p.Pro484Pro
A/G 89500239 synonymous_variant p.Glu485Glu
T/G 89500245 missense_variant p.Asn487Lys
C/T 89500294 missense_variant p.Pro504Ser
T/A 89500305 synonymous_variant p.Thr507Thr
C/T 89500308 synonymous_variant p.Ile508Ile
A/T 89500630 missense_variant p.Thr616Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06025.1
MEERRKGVGFGRMKGPFGVPEKPEFCVGLDTPLTKVKIDLLNRPKSIILVTGFGGSGKTTLATLLCWDQHIKSKFRENIFFVTFSKTPKLKIMVEKLFEHLGYEVPKFQNDEEGINQLGVLLRKLKGSPTLMILDDVWPDSEDLVEKFKFHLSDYKLLVTSRVAFPRFGTPCVLKPLLHQDAMTFFGHCARLDSNGLNIPDEDTIHKIVKGCMGLPLAIKVIGRSLSHGPNELWQKMVLELSLGNSILLDCNTELLTYLPKILYVLEDNTVIKECFMDLGLFPEDQRIPVTALIDIWAELYGLDNDGIEAMAIINKLESMNLANVLITRKNTSDTDNYYYNNHFIVLHDLLRELAIYESTLEPIEERKRLIIRTNENESEGGLDDKQQGFVTRILSNCFKYCCKHKPQQITARTLSISIDENVSSYWSHMHPTQAKVLILNLRVKQYSFPESMQKMRKLKALIITNYNSHPSELTNIELLGSLSNLKRIRLERIGVLSSFVTLKSLRKLSIYMSQAFQNGILLTSDAFPNLVDLNIDYCKDMVVLPSGLCDIIPLKKLSVTNCHKLLALPQEIGQLVNLELLRLSSCTDLEALPDCIGRLQNLRHLDISNCISLSNLPEDVGKLCNLRNLSMINCERCELPYSVANLVNLKTVSCDEETATSWEGFKAMLPNLLIEVSQVDVNLNWLPSVSS*


CDS Sequence:
>Vu_06025.1
ATGGAAGAGAGGAGAAAAGGAGTTGGGTTTGGAAGGATGAAGGGTCCCTTTGGTGTTCCTGAAAAGCCAGAATTCTGTGTTGGGTTGGATACTCCATTGACCAAGGTGAAGATCGACCTTCTCAATCGACCAAAGTCCATTATTCTGGTCACTGGTTTTGGAGGATCTGGGAAAACCACTCTCGCTACTTTGCTCTGTTGGGATCAACATATCAAGAGTAAATTCAGGGAAAATATATTTTTTGTGACCTTTTCGAAAACGCCTAAGTTGAAGATCATGGTGGAAAAACTATTTGAACACCTTGGATATGAAGTACCTAAGTTTCAAAACGATGAAGAGGGAATTAATCAATTGGGAGTTTTACTAAGGAAATTGAAGGGAAGCCCAACGTTGATGATTCTGGATGATGTTTGGCCTGACTCAGAAGATCTGGTGGAGAAATTTAAATTCCATTTATCAGATTATAAACTTTTGGTTACTTCAAGGGTTGCATTCCCAAGATTTGGCACCCCATGTGTCTTAAAACCACTCCTTCATCAAGATGCAATGACCTTTTTCGGTCACTGTGCTCGCTTGGACAGCAACGGTTTAAATATTCCAGACGAAGATACAATCCACAAGATTGTGAAAGGTTGCATGGGTTTACCACTTGCCATTAAAGTGATTGGTAGGTCACTGAGTCATGGACCAAATGAGTTATGGCAAAAGATGGTGTTAGAATTGTCACTTGGTAATTCCATATTACTTGATTGTAACACTGAATTGTTAACCTACCTTCCTAAGATATTATATGTACTCGAAGATAATACAGTCATCAAAGAGTGCTTCATGGACCTAGGGTTATTTCCTGAAGATCAAAGAATTCCTGTTACTGCTCTCATTGACATCTGGGCAGAGTTGTATGGACTAGACAATGACGGCATAGAAGCAATGGCCATTATCAACAAATTAGAATCCATGAATCTTGCTAATGTCTTAATAACACGGAAGAATACAAGTGACACAGACAACTATTACTACAATAACCACTTCATCGTCCTTCATGATCTTCTGAGAGAGTTGGCAATTTATGAAAGCACCCTGGAACCAATTGAAGAGAGAAAAAGACTGATCATTCGCACAAACGAAAATGAAAGTGAAGGGGGGCTTGATGATAAGCAACAAGGCTTTGTGACTCGCATATTATCAAATTGTTTTAAATATTGTTGTAAACACAAACCCCAACAGATCACTGCTCGCACATTGTCCATATCAATTGATGAAAATGTTTCTTCATATTGGTCACACATGCATCCAACCCAAGCAAAGGTTCTAATTTTGAATCTTCGAGTTAAACAGTACTCCTTTCCAGAATCCATGCAGAAAATGAGAAAACTGAAAGCTCTGATAATCACAAATTACAATTCCCATCCATCTGAGCTGACCAATATTGAGCTACTTGGCTCTTTATCCAACCTGAAAAGAATTAGATTAGAGAGGATTGGTGTTCTTTCATCATTTGTCACACTGAAGAGCCTTAGAAAACTATCCATATACATGAGCCAAGCTTTTCAAAATGGCATCCTCCTAACTTCAGATGCATTTCCAAACCTAGTGGATTTGAACATTGACTATTGCAAAGATATGGTGGTGTTGCCAAGTGGTTTGTGTGATATTATCCCACTGAAGAAACTCAGTGTCACTAATTGCCACAAGCTCTTAGCACTACCTCAGGAGATTGGACAGTTGGTAAATTTGGAACTGCTAAGGCTCAGTTCTTGTACCGATCTGGAAGCGTTACCAGATTGTATTGGAAGGCTTCAAAATCTAAGGCATCTTGACATCTCAAACTGCATAAGCCTTTCAAATTTACCAGAAGACGTTGGAAAATTGTGTAATCTGAGAAATCTGAGCATGATAAATTGTGAAAGGTGTGAATTGCCATACTCAGTGGCGAATCTTGTGAATTTGAAGACAGTGAGTTGCGATGAAGAGACAGCTACTTCATGGGAAGGGTTCAAAGCTATGCTTCCGAATCTACTGATAGAGGTGTCTCAAGTTGATGTAAACTTAAACTGGCTTCCTTCAGTTAGCTCCTAA


Promoter Sequence:
>Vu_06025::LG1:89495499-89497499(+)
GAGGAGGAGGAGAGAAGAATTCAAATTCATCAATCGCGATTCCAAAGGTATATGCATAACTTATACGTAAGTGGGTAGCCAAAAATACCATAACTATCATGCACCTATATATACTTGAAACTCTTATTTGTTTTCTACACATATTATTAAATAAAACAATTTCAACACAAGTAAATTCAGTTTTCAAGTAAAACCGTGTGTGTGTGTGTATATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTGAAAATTAAATTAAAATATTAGCATTATTTTCGTATTATAATTTTGAAACTCCAATTTTACTAGTAAACATATTTGCTAATTTCTTAAGTGTCGTGACTCGTGTATGGTGCTTTTCCACCGTACTTTTCTACACGTTTCTTATTTTTTTATGCTAATATTTAGATTTAATCTATTTTTAACTTAAATTTCAAAAGTTTAAAGCATTAGTCTATTATAATAACTTGACAGGTACAATATGTTTATCCTGATCATCACATTTTATTTATATGATTTTTTAAAATGTAATCTATTTTATGTAGTATAATCTTAATTATTGGAAATAATTTTCTTACTATTGTATTTTTACCCTTTCTCACACAGTTCAATAGTATTAATCTTCTGGTCTTGTGTTTTTTTTTTTAAATAATTAAAATAATCCCGACGTACACGCAACTTATTTTATAGTACACTTAATTTTGACGAATAATAATTAACACTTACGCATATATCATTACAACCTTAAGTTATATTTTACAAATTTTGTAATAATAAACTAACTTCTAAAACATATAAATTTTTCTTATATTATTTCTTTAAAACATATTGTTAACAAGTTAATATCTTAAAATTTAATAAATTTGTTCCTAAATCAATCACTTACAAGATTTAAAATGATCACCGTATCCTTCTCGTGGAACACTAAAATGGTAACAAAATGGCTTATCAAGATCTATATAATTTTCTCTAATCAATGTGTCTTTTTAAAAAATAAATATTTTTGTATGTTTTTGTTAAGTATAATCAAATATAAATCAATTTCACATTATTTAATGAAAAGACTTCTAAAATATTTTTCATTGAATTCTTTCAAAAATTTTAAATTTCTTAATTTGTATTCAAGTTTAATAAAAGTATAAAAATTGGTTTTTAAATGTGATTAATACAAATCAAATAATAAATGTCAAATTTCTTAATTAGTATGGATTATTATTTTTATATTTTTACTTACATTGGAGACAAAGTGTTTTTCTGTTCAAATAGGAAAATAATTATTTGACACACCTAAATTTTTTACATTCATTTGACATTACCTTTATTTACTTTTTACTCTCTTTTAGAAAAATATAAAACTTTATACTTTTCTGACAATTTTATCCTTGTACCCTCTGTCAAATGAATGTAAAAGTGTATCACTCATTCAAATAAGATGATCGTATGAATCTTTTGTGTTGGAAGTCTCATATCGATTAGAGATAAGGTCAATTCATAGTTTATAAGTGGGTACAAACCTTACAAACTAATTTTATGGAGTTGAGTTAAAGTCCACTTCTAATATTTTGTGTATCCATTAATAAAACTTTTGTACAAAAAAGTTAATTTACATATTTAGTCCTTTAGTTTTTATATATCATGTTTACATTTTTTAATCCTTACAAGTTTATTGGATGAATTCAAATTAAAAGAGATTAAAAATAACATATAAATAAACAGTAAAGAGAAAAAGAGTAAAAAGGGTTGTTTAAAGATTGATATGAATAATTTATTACGAGAAATGAAAAGAATTTGTTTTTGAATTTGAAAAAGTAGATGAGTAAATAACAAATAAAAACCAACGTGTGAAAGTAAAAGAGATTAAAAAAATGGAAATGAATTAAATGGTTTTACATACATGCAGGCAGCAGCACTTAGAAAGGCGGTTGGTTATTAAGTATTGA


Gene Sequence:
>Vu_06025(+)
ATGGAAGAGAGGAGAAAAGGAGTTGGGTTTGGAAGGATGAAGGGTCCCTTTGGTGTTCCTGAAAAGCCAGAATTCTGTGTTGGGTTGGATACTCCATTGACCAAGGTGAAGATCGACCTTCTCAATCGACCAAAGTCCATTATTCTGGTCACTGGTTTTGGAGGATCTGGGAAAACCACTCTCGCTACTTTGCTCTGTTGGGATCAACATATCAAGAGTAAGTCATATCTCTTTTTTGCTTCTCTATCTCATAAATCAATTAAGAGAGTGAAAAGGAGAGAAAGTATGAGATATAATAAACTATAAAAAGAAACTTGAACGGTTATCTCAGGCCACTCTTGAGTTTATCGAAGAAAATGTTTATTTTGAGAGATATAAATACTGAACTAATTATATAAGAGATCAACAAAACTCTCTAAAAAAACCTTTAAAATAATAAATTAATAAATTTTTTATTTTTATATAATATTCTACTCTTTCATTTTTTATCAAGTTAGACTTACTTGGATTCTAACTATAAATACTTTAATCAAATAAGTTTTACTATATGTACTATAAAAGTTTAAGGAATTATGTGAAAAGTAGATACAACTCACGTTTATTTAAGTATACTTGACTCGTTTTCTGCTACAAGAAGTTTGTTGTTAATTGTTTTTAGGTCAAATCTACTTCAACTAACGGCTTGAATATGCAATCGATTTTTATTAAGACAGCTTATATGTATCTTTAAATCAACCTTTTTCAGATGCAAGTTATTGACTAAAGAAGCAATATATATCCTGACCTGTATGTAGTCAAGTCTTTGTTTAGTGCTAATATATATATATTTTTAATTTAATATACAATATTTTGTATAAATAGCATGGTACTATATTTATGATAGATTGTGTATTTTAAATTGTCTATTATAAAGTATACCTTAACTTTTATATTTTTATTTTATAAGAGGAACGGACTCGATTTTGTTTCATTTATTTTGGATCTTAATGGATAAAATATAAATTGAAATGAATGACTGGATCAAAAGATTTTCTGTCTCTCCATCCGTATATGAATAAATAAGGAAACATATGAAATGCTCTGAACTCAGGGTTATTTTGATTTCACAAGGTAAATTCAGGGAAAATATATTTTTTGTGACCTTTTCGAAAACGCCTAAGTTGAAGATCATGGTGGAAAAACTATTTGAACACCTTGGATATGAAGTACCTAAGTTTCAAAACGATGAAGAGGGAATTAATCAATTGGGAGTTTTACTAAGGAAATTGAAGGGAAGCCCAACGTTGATGATTCTGGATGATGTTTGGCCTGACTCAGAAGATCTGGTGGAGAAATTTAAATTCCATTTATCAGATTATAAACTTTTGGTTACTTCAAGGGTTGCATTCCCAAGATTTGGCACCCCATGTGTCTTAAAACCACTCCTTCATCAAGATGCAATGACCTTTTTCGGTCACTGTGCTCGCTTGGACAGCAACGGTTTAAATATTCCAGACGAAGATACAATCCACAAGGTGCTTCTTCTTAATCATACTTCATGTTCTTCTGCATAATGCAGTCAAAAACAAATTTTAGGACGTTTTTTTATAACTTTATTAGTGTTTTATTTGAAATTTACTTTTTAAACTTTTCAAGATATAAAATTACTTACTAAATTATTGTATGGTAATAATTTTGTTTGATCTATTTAAAGTAAAAATATCATTGTAGTGTTATTTTACCTTTACTTGCACTGGTTGCAGATTGTGAAAGGTTGCATGGGTTTACCACTTGCCATTAAAGTGATTGGTAGGTCACTGAGTCATGGACCAAATGAGTTATGGCAAAAGATGGTGTTAGAATTGTCACTTGGTAATTCCATATTACTTGATTGTAACACTGAATTGTTAACCTACCTTCCTAAGATATTATATGTACTCGAAGATAATACAGTCATCAAAGAGTGCTTCATGGACCTAGGGTTATTTCCTGAAGATCAAAGAATTCCTGTTACTGCTCTCATTGACATCTGGGCAGAGTTGTATGGACTAGACAATGACGGCATAGAAGCAATGGCCATTATCAACAAATTAGAATCCATGAATCTTGCTAATGTCTTAATAACACGGTGAAATGAATGTTTTCTTCTGTTTTGAGGACAAATATTACATTGCAAGTAATCTAAGAATTCATTTCTGCTATTTTAACAGGAAGAATACAAGTGACACAGACAACTATTACTACAATAACCACTTCATCGTCCTTCATGATCTTCTGAGAGAGTTGGCAATTTATGAAAGCACCCTGGAACCAATTGAAGAGAGAAAAAGACTGATCATTCGCACAAACGAAAATGAAAGTGAAGGGGGGCTTGATGATAAGCAACAAGGCTTTGTGACTCGCATATTATCAAATTGTTTTAAATATTGTTGTAAACACAAACCCCAACAGATCACTGCTCGCACATTGTCCATATCAATTGGTTAGTTATCCCTTTGGAATTTTAGTTGCAAAAGTTCTTTTCTTCAATTGACATCGATCGTATGAGTTGCTTTTGCAGATGAAAATGTTTCTTCATATTGGTCACACATGCATCCAACCCAAGCAAAGGTTCTAATTTTGAATCTTCGAGTTAAACAGTACTCCTTTCCAGAATCCATGCAGAAAATGAGAAAACTGAAAGCTCTGATAATCACAAATTACAATTCCCATCCATCTGAGCTGACCAATATTGAGCTACTTGGCTCTTTATCCAACCTGAAAAGAATTAGATTAGAGAGGATTGGTGTTCTTTCATCATTTGTCACACTGAAGAGCCTTAGAAAACTATCCATATACATGAGCCAAGCTTTTCAAAATGGCATCCTCCTAACTTCAGATGCATTTCCAAACCTAGTGGATTTGAACATTGACTATTGCAAAGATATGGTGGTGTTGCCAAGTGGTTTGTGTGATATTATCCCACTGAAGAAACTCAGTGTCACTAATTGCCACAAGCTCTTAGCACTACCTCAGGAGATTGGACAGTTGGTAAATTTGGAACTGCTAAGGCTCAGTTCTTGTACCGATCTGGAAGCGTTACCAGATTGTATTGGAAGGCTTCAAAATCTAAGGCATCTTGACATCTCAAACTGCATAAGCCTTTCAAATTTACCAGAAGACGTTGGAAAATTGTGTAATCTGAGAAATCTGAGCATGATAAATTGTGAAAGGTGTGAATTGCCATACTCAGTGGCGAATCTTGTGAATTTGAAGACAGTGAGTTGCGATGAAGAGACAGCTACTTCATGGGAAGGGTTCAAAGCTATGCTTCCGAATCTACTGATAGAGGTGTCTCAAGTTGATGTAAACTTAAACTGGCTTCCTTCAGTTAGCTCCTAA