Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_05931 LG1 88060755 88066351 PREDICTED: G-box-binding factor 1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, cytoplasm, nucleus, cytoplasm
Molecular Function   enables   transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, protein binding, protein binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, sequence-specific DNA binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, sequence-specific DNA binding
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
A/T 88060850 3_prime_UTR_variant
T/A 88060915 3_prime_UTR_variant
A/T 88060925 3_prime_UTR_variant
A/T 88060985 3_prime_UTR_variant
G/C 88061553 intron_variant
C/T 88061652 missense_variant p.Arg257His
A/T 88061905 intron_variant
A/T 88062085 intron_variant
T/A 88062208 intron_variant
A/G 88062242 intron_variant
T/A 88062311 intron_variant
G/A 88062522 missense_variant p.Pro204Ser
A/C 88062583 intron_variant
C/T 88062680 missense_variant p.Gly178Glu
C/T 88062953 synonymous_variant p.Ser156Ser
C/A 88063155 stop_gained p.Gly124*
A/G 88063261 intron_variant
C/T 88064239 intron_variant
T/C 88064445 intron_variant
A/G 88064447 intron_variant
A/G 88064476 intron_variant
G/A 88064654 intron_variant
C/G 88064662 intron_variant
T/C 88064670 intron_variant
T/A 88064694 intron_variant
T/A 88065245 intron_variant
G/A 88065247 intron_variant
A/G 88065266 intron_variant
T/A 88065361 intron_variant
A/T 88065395 intron_variant
C/A 88065399 intron_variant
G/C 88065591 intron_variant
T/G 88065790 intron_variant
G/A 88065791 intron_variant
A/C 88065801 intron_variant
A/G 88065806 intron_variant
C/T 88065872 intron_variant
C/T 88065912 intron_variant
G/A 88065948 intron_variant
C/T 88065949 intron_variant
A/T 88066151 5_prime_UTR_variant
C/T 88066156 5_prime_UTR_variant
G/A 88066213 5_prime_UTR_variant
T/A 88066214 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_05931.1
MGAGEESTTKPSKSSSSVQETPTVPSYPDWSSSMQAYYSPGATPPPFFASTVASPTPHPFLWGSQHPLMPPYGTPVPYPALYPPGSIYPHPSMAVTPSVIQQSTEIEGKGADGKDRDSSKKLKGTSANTGSKAGESGKAGSGSGNDGMSQSGESGSEGSSNASDENTNQQESATNKKGSFDLMLVDGANAQNNSAGAISQSSVPGKPVVSMPATNLNIGMDLWNPSSGGAEAAKMRHNQSGAPGVVALGEQWIQDERELKRQKRKQSNRESARRSRLRKQAECEDLQKRVETLGSENRKLREELQRLSEECEKLTSENNSIKEELERMCGPEAVADLG*


CDS Sequence:
>Vu_05931.1
ATGGGGGCTGGGGAAGAGAGCACAACTAAACCTTCAAAGTCATCTTCATCAGTTCAGGAGACACCAACAGTGCCTTCATATCCTGATTGGTCAAGCTCCATGCAGGCCTATTATTCTCCTGGAGCCACTCCACCCCCCTTTTTTGCCTCAACTGTTGCTTCACCAACTCCCCATCCCTTTTTATGGGGAAGCCAGCATCCCTTGATGCCGCCATATGGGACTCCAGTTCCATATCCAGCTTTATATCCTCCTGGGAGTATCTATCCTCATCCAAGCATGGCAGTGACTCCGAGTGTTATCCAGCAAAGTACGGAGATTGAAGGGAAGGGAGCTGATGGAAAGGATCGAGACTCGTCGAAAAAATTGAAAGGAACTTCTGCAAATACAGGTTCCAAAGCAGGAGAGAGTGGAAAGGCAGGCTCAGGTTCAGGCAATGATGGCATGTCGCAAAGTGGTGAAAGTGGTTCGGAGGGTTCATCAAATGCCAGTGATGAGAATACTAACCAACAGGAATCAGCTACAAACAAGAAGGGAAGCTTTGACTTGATGCTTGTCGATGGAGCCAATGCCCAGAACAATTCTGCGGGTGCCATTTCTCAATCTTCTGTGCCTGGAAAGCCTGTTGTCTCAATGCCAGCTACTAATCTTAATATTGGAATGGACTTATGGAACCCCTCATCTGGTGGTGCAGAAGCTGCAAAAATGAGACATAATCAATCGGGTGCCCCAGGAGTTGTTGCCCTTGGTGAACAATGGATACAAGATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCGAACAGAGAGTCAGCTAGGAGGTCAAGGTTACGCAAGCAGGCTGAGTGCGAAGACTTACAAAAGAGGGTGGAGACACTGGGAAGTGAGAATCGAAAACTCAGAGAAGAGCTTCAGAGACTTTCTGAAGAATGCGAGAAGCTTACATCTGAAAATAATTCAATCAAGGAAGAGTTGGAACGGATGTGTGGGCCAGAAGCAGTTGCTGACCTTGGATGA


Promoter Sequence:
>Vu_05931::LG1:88066351-88068351(-)
TGAGTTTTGTTTTGGGTTTTTCCTCTTGTTATAGTTTTTTTTTCTGATAATGTAATATTCTCTCATTATATTCTAAATAATCCAATATCTTCAAGATATATTTGATTGTTGTGAAAATTTAAGAATATTTAAAATTTTTTGACAAATATTATCTTTTGATATTTACTAATATATTTAAATAAGGTAATTATTTAAAAATATCAAATAAAATATTTAAAGATATATTTTTCACCAAATGCCTTTTAGCATAAACATTTATTAATTATTGAAGCCATTATAGAAAAAATCATCAACGTCCAATTTTTGTTTTCGTTCATTTTTTTCCTAGCTTAGTCAAATTTTTTAATTCTTTTATGTTTTATTTTGCCTCTTCATGTCATGCTTTGCTTGGATTTTTATGGTTTTAATTATTTTTTGTTTTTGGATTGATCTTTAATGGATCATTAAACTTTAATAATTTATTTTCACATTTTTATGGGCTCAATTTAACTGTAATTACACTAATCCATCTCAAACTATTTAAAGAATAAATATACAATTAAACAATTATTTTTAACATGTTTTTATATTTCATGTTTAATAAATTTAATTATAACAAATCTAATTAAAAACCAATTAAAAATCTAATATTAAAAATTAAATAAGAATATAAAGGTTTAGCTATTCATTCCCCTGATAACCCTGTCTCTGTTATTGACATAAATAGTTGTAATAGGCTATTCTGATTAGAAATAATTCAATAGAAGCTCTCCAATTATGGAACATAGGAAAAGTCCTAGGGTTTACATACACAAGAGAGGATGCAGACATAATAAAAGGATAAAACTTATTCGCTTGACATATTCAACAAAAGACTAATATTTTTATAACTACTATTATCAATTGTTAAAAATATTTTTTGTTTAAAAAATATTAAATTACGAAATCACAAGTAAGTATGAATGAAATTTCATCGCTATACTTTTGAAAATTATTATATTTTTCTTGTAACCCTAAGTAGATAGTTAGAGAAAAAAATAATATAAGTACAAAGTTTGATTATATGTAACCTACTAAGATTAATAATATGTAAGGGTAGGGAACTTTGAAAGTTTTTTTATCAACAAGAAACAAACATATTATTAATGGCATGATTCATCTCTATGAAAACCAATTATATTTAAGAAAAATGTTTTTTTAATAATTTTTTTGACAATTTTTTATAACATTTATGTGGTAGTTCGGTCTATTTCTTGTTAACGTAATCTTAAATAAAAAACTAGGGTTACCAAAAACGTTGCATTGAATTCCATGGAATAAGTTATAATAAAAAATATTTTGAGAATAGCAAGTAATTAATTTATTATTTACCAGTAAATGTGATAAATATTAAAAAGATATTATCAAATATCGGTACTCGGAGAACCGTTTAAATCTACTATAATCCCAACAGATAAGAAAAGAGTAAATTACCATTGAGTCCCCGTCTCGAGCATAGGATTAGAGATGGGCCAATCCGTGGAAGAAGGTTGTTTTTTTTAATTGAATTTAAAATTCGAAACGATACACTCTGACGTTTAACAGCAGTGTTAAAGATTTGTGGTTATTTTTTAATTGAATTTAAAATTAAATAATAGACTACGAAGAGCACTGTTACGGATATGTGCGTTTTGAAATTAGGTAGAAAAGAAGGAATGGAAAGGACGGAGAGAGGAAGAATTAAAATGGAAAAAAGAAATTGATATAGTAATAATAAGTCGTATGGAATAAAAAATATTAAAAAAAGTTATCCACAAAAGCACTTAGTTGTCAGATGAGTCATCGCGAAAGTTGCAATGTCTCAAACCTAATCCAGTGAGACGCGGACACCCCACAGCTGTAACCCTATTCTCCGCACGTGTCACGCCAGAAGCCCTAAACCCAATCCAACTCACTCCTCCTCTCTGGTTGGTTTCAGTTTCAATCTAAATTTCAATTTTCAATTTTCAATTTATGTTTTCACATTCCAATTAGTGTCCGCT


Gene Sequence:
>Vu_05931(-)
GGTAGAACCCACGTGCCCACTCCACACCTTCCTCCTTTTCTCTCTCGAGTTTCCAACGCAACAACAGCCACAGGAGTTGTTGAAAATAACAAACATTTACTGTTGTTACCCTTCTACCTTCTCAGACGCACGCCACAACAAACACCTTCTCAGACACAACACAACACTAACAAACGTTTGCAACACCTCGGTTTCGGTTTTCCCATAATACAACTGTAACTACATCAAACCAAAAGCCTAGTGTGAAATTATTGACTTCAAATTTCAAATCCACTTTGTCCCATCCCACCTGGACTTCCACCTCATCGCTCCTCTCAACGCCATGAAAATAGGTCAGGTTCTTTCTCTTCTCTCTAGCCCTTTCTCTAATTTATTATCAATACCAATTGCTCCAAGATCCGTGCTCAAACTTTCTGCTTTTCTTAACTAGTATTCTTCTGTTTATGTGTCCCACAGTCTTTGCCTTTTTACCGGGTTTGGTTTTTCCATTACACAATGCTCTCTTTCTTTATTTTCTTTTTTGTTATTGTTATTTCGGGTTGCTTTGCCGTGTGACCTTTCATAGAATTCCAATTTTCTGTTACGTCTTTTCCTGCTTGTTTCTTGATTCTCATACTTTGTTTCTTTATTTTGTTTTTTCCTTAGTTCTTTAAATATCCTGACGAACCTGAATTGTTTTTGTTTGATGTTATTGCTAGCTAAGGAAAGTAATTTTTGGTGTGTCCGTGTCTGTGGCATTCTCTTAAACAGCAACACGATTCCTGAAAGGAGTTGCTTGGTGCTAATGCTTATGCTTGCTTAGATTTTCAACCAAATCTCTGATTTCAGAAAGATTTAATTTGATATATGGGGTTAAGTTTTGGTTTGGTTTGCGGATCTAGAAAAGAGAGGGAATTATCATGTAGTGTAAAAATATAGCACCATCTCATGAATTAGAGGGAGGGCAGAAAGGGAAATTTTACCTTTGTTTGATTAGGTTTAGTGAAGATAAAAAAAGGACTTGCAAAATAAATAAATTGTATAGTTGAGAAGGATATTTCATGTTTTTTTGTGTTGAGCTGTATTGCTTCCATTTCATCTCTTGTTTGAAAGTAATAGATTGGTCCAGAAAACTAAGGGCATTGTCAAAGCAGATAGATGGAAAATATAGTATAATAAAATTCCCTTTTTAATCTGTGGCATCTGACAAAGTACTCAAGAATTGCAATTGCATATATTTGATTTGAATGAACCTCTTTAAATGACCTAAAACGCAATTGATACACTAAATGACCTAAAACACAATCGTCACTTTGGTAAACCTGACATAATACTCAATAGCATGCAATAGCATAGAAGTGGAGAGGCCTTGAACTGATCTGAGATTCAAGTATCGGCGATTGAAGCTGCACTAGTGGCCAAAACAGTGACTTTTTGTGTGCTATAGAGGGGCTTCCATGATATATAGCCTTCAAATTCCCATTTTGACCCCTTGAATAGTGTTGCGCTTTAGAATTGGTTTTTTTTTTTTTTCATGTGCCGCGTTAGTTTTTCTTCCTTTATATATATCAGTTCATATTGTAACAGTTTTTATGTAATTTGTTATGTTCTTTTTCTAAATTTAACTGTTATCTTTCATTACTATGTTGTTATTGCTTGTAGATTGGTGGTGGTTTTGAGTGTAAACTGACAGTGGGACTTGATATGTGTGACACATACCATTTATAGTTTGTATTATAACATTAAAAATAAAGGTCATCACACATCCTGCTATAGAATTTTCAAAGTTGGCTGCATCATTGTCTGAGATTGATTACCAGGATTCTAAATTCACATAACTGAAATTGCACTTATGAATATACAAACACACATCAATTTTTGCATGACATAATTATGTTATCCTTGTGTCTCTACTGCTTTATGCTTCATTCAAGGTTTGTTTTTTAGTATTTATTCATTGTACTAATTTTCTGATAGTTAATGGTTACAAGAGCATTAGTTTATCCAAGTTATAAATGGCTGGTTGGGGTTTGACTACAGGAGAGAATTGGTGAATTGGTAGAGCCAAACTTCATTAATTGAAAAGTGGGAGTCTGGTTACCCCGTAATGACGATGTAAATTCCATTTGTAAAGGAAATGTGTAATTAAATATTTCTTTGGTGAATGAAGCACACGAAATAATATTTTAAACTCATTTACACTATAATTTTGCAGTAGATTTGATAGTTTCTGCTATTTAGTGTCAGTGGTTTTGCCATCTAATTTATATTTGTTGTATTCAGTGTGTGTTTTCTGACATAGGAATCTATTCAACTTGATCTTATGACCTCCACAGATATCAGCATTTGATCATAGGTCCTTTTTTATTTTTGTGGCTGAGAGGAACTGATTCCAAACTATTCTATATGGGGGCTGGGGAAGAGAGCACAACTAAACCTTCAAAGTCATCTTCATCAGTTCAGGTCTTTCCCCAACTCTCTTCCTGCTCTCTTTTTATTTTGCCTCTTCTTCCTCTTGTGTCTCCTTATCCTTATCTTCTCTGTTTACACTAGCAGGAGACACCAACAGTGCCTTCATATCCTGATTGGTCAAGCTCCATGCAGGTTGGAATATATGTTAAATAGGTTCATCAGCCTTTACTTATGCATGCTGAAGCACTTCAGCAGATAAATTACGTTGATATCTAATGCATTTGCTTTTCACTAGGCCTATTATTCTCCTGGAGCCACTCCACCCCCCTTTTTTGCCTCAACTGTTGCTTCACCAACTCCCCATCCCTTTTTATGGGGAAGCCAGGTAAATCTAGTAAATCATTTGGGATATATTCAATTATACTTTATGGAAGAGAATCTCATTTACAATTTTGTTATTTTTCCAGCATCCCTTGATGCCGCCATATGGGACTCCAGTTCCATATCCAGCTTTATATCCTCCTGGGAGTATCTATCCTCATCCAAGCATGGCAGTGGTAAACCACTTTTTCACACTCTAATCCCTGGAATGCCTCTATGCCTGATCAGAAAAGAATGAATTTTTATCTGTTTGTAGGCAACTATTTTCACTACTTTACTATAGATGGGCATTTTGATTCATAATCTATCTTTTTTTTGTTGGTTTTAATCATATTGCTAGACTCCGAGTGTTATCCAGCAAAGTACGGAGATTGAAGGGAAGGGAGCTGATGGAAAGGATCGAGACTCGTCGAAAAAATTGAAAGGAACTTCTGCAAATACAGGTTCCAAAGCAGGAGAGAGTGGAAAGGCAGGCTCAGGTTCAGGCAATGATGGCATGTCGCAAAGGTTTGGCAAACAACTGAATGAACTAATTAATTGAGATCTTTTCTACTTCTTTCTCTTCAATATACATTTTTAAAATGAATTTCTATTAAAAAAATATGAAACAGTGGTGAAAGTGGTTCGGAGGGTTCATCAAATGCCAGTGATGAGAATACTAACCAACAGGTAAATAACAGATTACCATTAGTAAATGTGCTTTCACTTGTTTTTGTAAATAATAACTGTGCTGAAATATAAACAAGCCCTGTTTTTCTTTTGCAATCACTTGGCTTTGTTATTTTGATGTTCACAGCAAAAGTCTGAATGGTGTAGTTAACACCCTGATTTTTCTCTAAACTGTTTTTGGCTTCTTTTTTCTGATGTTTCTCCACAGGAATCAGCTACAAACAAGAAGGGAAGCTTTGACTTGATGCTTGTCGATGGTATTCATCACCTCCATTCATGATTATCTTTTTTTCCTTCTCAATTGCTGAGATGAGTTATCGTTTCCATTAACTTTTCAGGAGCCAATGCCCAGAACAATTCTGCGGGTGCCATTTCTCAATCTTCTGTGCCTGGAAAGCCTGTTGTCTCAATGCCAGCTACTAATCTTAATATTGGAATGGACTTATGGAACCCCTCATCTGGTGGTGCAGAAGCTGCAAAAATGAGACATAATCAATCGGGTGCCCCAGGAGTTGTTGCCCTTGGTGAACAATGGATACAAGTATGAGTCGTACAGTTGTTTTGCTAATCATGTTTTGCTTTTAGTGGTGAACAAATAAACATTCCTTTACGTATAATAATTATTTGAAAAGCAATTTTTTGTTGATACTGTACATCATGTTCCTAGGTATGGTCACTCAATACTATGAGGATTTTGAAGGAAGGAAAAAAGTCCTTAAAGTTAATAGATTGTGTTGCCTAGATTATCTTTTGTTTGAACTTGATTAGTTGGTTTTAGGCTTAACAACACTTTTGAGTCCTTCTACTGTTGCCAAAATTTGATTTTGGTCATTTTTTATCATGTGTAAATTTGGCCACCTATTAATATAGTGCAATTCTGGTTCATCTAATTATTCAATATCCAATGTTTGTGTTGAAGTTGTACTCTCCTGGGCTACCATGTTAGCACTTTCATGCTGATGTGGTGGCACTCCTGCGTTGTTATGTCAACATCTCTATGAAATATTAGACATCAAGTTGGTAGATGGCCCAAAATTGTAAAATAGTATAGGGATCAATCAAATCTGTGCAAAAAAATTAGGAGGACCAAAGTAGAACCCCAACCCCAACACTACAGTGATAAAAAAGTGTAATTAACTATTGCTTTTATTAGTATAACTACTGTAAGAGTATATCCTCAAACAGAAAAGAAAAACTAAAGTAAGAGTATAATAGTAACATATTTTTAATATCTATGCTTGATTTTGGTAGGATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCGAACAGAGAGTCAGCTAGGAGGTCAAGGTTACGCAAGCAGGTAACTTTCGTCTAATATCTATTTCATGCACCTTTGTTACTGGGGAAGATTAGAAGTATTTTCAATTGCTTCATATTTTGAGGCTAGAAGCTATATTATTTGACTATGCAGGTTCTTTCATACTACCATTTTACAATTTAACAGAGAATAACAACGTGTTATGCATTTTTTTGTACTAACCAGGCTGAGTGCGAAGACTTACAAAAGAGGGTGGAGACACTGGGAAGTGAGAATCGAAAACTCAGAGAAGAGCTTCAGAGACTTTCTGAAGAATGCGAGAAGCTTACATCTGAAAATAATTCAATCAAGGTACCATTCTTCCTTCTCGAGTCCTTTACCTTTTGCAATTTATAGATTTGACATGTCTGAACTCACGACATCAAATTTATCTTTTGAACATAATTGCTTTAAACAGGAAGAGTTGGAACGGATGTGTGGGCCAGAAGCAGTTGCTGACCTTGGATGAACCATCGACACGTTCCTCGGTGTAGTGTTTGATGGTAACGACAAAATTTGATAGTTTCTTAATTAAGACGAATCTGCAGCTGGAATTTTCTTATGAATGGCCCGGTCTCTTAATTGAGAATAGGATATAATGTTTTTCCTTGTTATACTAATTTATATCATTAACCCTCAATTGTAATTGCCCCTATGATTTTACATGTCATTTGTTTGTAATATTTACCAACCAGTACCGTAGAATAGACAAATGTAGGCTACTTGAGCTCTTCTGTTCAGAACATAGTTTTGCAACTGGTGTTGAGAGTCTTGCTTCAACTTTTGAAATCTTCATTACTTCACTTTAGACTCATTTTTTGTTCGATACT