Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_05910 LG1 87783679 87784092 PREDICTED: ethylene-responsive transcription factor ERF024-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   defense response to fungus, regulation of transcription, DNA-templated, defense response to fungus, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, defense response to fungus
Cellular Component   located in   nucleus
Molecular Function   enables   DNA-binding transcription factor activity
SNP Position Effect Amino acid change
T/C 87783694 missense_variant p.Cys6Arg
C/A 87783707 missense_variant p.Pro10Gln
G/A 87783714 synonymous_variant p.Lys12Lys
T/A 87783728 missense_variant p.Leu17His
C/G 87783798 synonymous_variant p.Ser40Ser
G/A 87783800 missense_variant p.Ser41Asn
C/T 87783804 synonymous_variant p.Asn42Asn
T/C 87783812 missense_variant p.Ile45Thr
G/T 87783815 missense_variant p.Cys46Phe
T/C 87783818 missense_variant p.Val47Ala
C/G 87783832 missense_variant p.Arg52Gly
C/T,* 87783843 synonymous_variant p.Asn55Asn
A/G,* 87783853 missense_variant p.Arg59Gly
G/A,* 87783854 missense_variant p.Arg59Lys
G/A,* 87783855 synonymous_variant p.Arg59Arg
C/T,* 87783856 missense_variant p.Arg60Cys
C/A 87783862 missense_variant p.Arg62Ser
G/C 87783863 missense_variant p.Arg62Pro
G/A 87783877 missense_variant p.Val67Met
T/C 87783883 missense_variant p.Cys69Arg
G/A 87783884 missense_variant p.Cys69Tyr
T/C 87783914 missense_variant p.Ile79Thr
G/A 87783917 missense_variant p.Arg80His
A/T 87783937 missense_variant p.Met87Leu
T/G 87783938 missense_variant p.Met87Arg
G/C 87783939 missense_variant p.Met87Ile
C/A 87783962 missense_variant p.Thr95Asn
T/C 87783974 missense_variant p.Val99Ala
C/T,A 87783990 missense_variant p.Asp104Glu
G/A,T 87783999 synonymous_variant p.Ala107Ala
G/T,* 87784003 missense_variant p.Ala109Ser
C/A 87784006 missense_variant p.Leu110Ile
G/A 87784018 missense_variant p.Asp114Asn
T/C 87784022 missense_variant p.Val115Ala
G/A 87784024 missense_variant p.Glu116Lys
C/T 87784029 synonymous_variant p.Leu117Leu
G/A 87784039 missense_variant p.Asp121Asn
T/C 87784073 missense_variant p.Phe132Ser
T/C 87784076 missense_variant p.Val133Ala
T/C 87784090 stop_lost&splice_region_variant p.Ter138Glnext*?

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_05910.1
MAHLNCQLPPSKFFHLLTSNIPYNTPISPTIFLHITTMRSSNGTICVASSTRASNGNGRRHRVYYGVRCRSSGKWVSEIREPRKPNMIWLGTFATPEMVVIAYDVAALALKGKDVELNFPDSASSFPVPASFVACDI*


CDS Sequence:
>Vu_05910.1
ATGGCTCACCTCAACTGTCAACTGCCACCATCCAAGTTCTTCCACCTTCTCACCTCAAATATCCCTTACAACACACCAATTTCTCCAACCATTTTCCTTCACATCACCACTATGCGTTCCAGCAACGGTACCATATGTGTTGCATCAAGCACCCGAGCCTCTAACGGTAACGGAAGGCGCCACCGTGTGTACTACGGAGTGAGGTGTAGGAGCAGTGGAAAATGGGTTTCTGAAATCCGTGAGCCCAGAAAACCTAACATGATTTGGTTAGGGACATTTGCCACCCCTGAAATGGTGGTTATTGCCTATGACGTGGCAGCGCTTGCTCTTAAGGGGAAGGATGTCGAACTCAACTTCCCTGACTCCGCCTCTTCTTTTCCCGTTCCTGCTTCATTCGTTGCTTGTGACATTTAG


Promoter Sequence:
>Vu_05910::LG1:87781679-87783679(+)
ATTGACACAACTCACCATAACTGGGGACAAAAGAAGCTATTAAGCCTAATTATTTTATTAAATAGAATAAAACTAATTTATATATAATTATATAATAAATTTTTAGAAAAATTAAATAATATTTATATATTAATTTAAAAATATAATAAATTAATAAAAAGAAAAGAAAAAAAACTCAACAGATGTGGTACATCCGTTGAAGAATTTTTTCTTCAGTAGATGTTGACGTCCGTTGAAGAAAAGAGGTGGGGGTGTAAGATATTTTAAATATAAAAGATAGTTTTAAAATTTAAAAAAACGTGGTGGTATAGGGAACAATGTGGGGTGGTGTAGAGAGTAACCCTCCGCTCCTTTTCTCTAAGGTTATATTTTTGGGCTGGCTGTTTGCTGTTGGGCCTCTTTCTCTTTCAGAGTCCTGGGTTTCTATATAAATCCATTCTTACCTTTTATATCACTTGTAAAAACACTTCCATAAAAATAGGAAATATATATATGTATAACTTTCCCCCCAGTGGTACCTTCTTCTTCCTTATGTCAATTCATACCATAGATATGATATGATACTAAAGCGGGTTAATTCCGCTCTGCCACTTAGCTCCAATTATTCTTGATTTTTTTTTCTTTCTTTTTCTTCTCTTTTGTAGCTTGATTCTCTTTCCTTTTGGAATTCCTCCTTTTATCTCTGTTTTTCTTTCATGGAATTGAGCAATATGGATAGATCATGAATTCCATCAAACCCATTTTACTTGCATCCAGGTGAGAATCCAGGCTGAACAATGTTGTTCTAAACATGACTTCCCTCTATGGACAAAACAGAAGAACAAGTACATCACTAATTTACTGCTATTGAGAATGAAACATGTCAAAACTAGCAATGGGTAATATTGTTTTTGTTCTAACAAAACCTACAACTATAGTAATAAGTGCAAGTTTAGGTAATCTCAGACTTTTTTATAACCACTTTAGTTACTGAAAAATTGTAATTATTTTATGGGTCTCAGTCTATTGTCACGTTTGGCTTAAACCAAAAAATAAAGGAGATTATGTCAAATTTCCTTTAAAAGTTTGTGTTGTTTAATCGATCGGTTAAGATATTCATTATGCTTTACTAAGCATTGTTGTTGCTTTGTAGTGATTTCATAAGTGAATCTTAGCTTTCTATTTTACGTACAATAAAACAATTATTGTATTATTAATTATTTTGTTAAATCTTAAGCTGTTTTGTAGGACAATTTAAAAAAAAAAAAACTCATCGTACTAATATGTATAGTCAAAGTCTCTTAATCAATTTTTATGAAACTTCAGTATAAGCAAATTTTGTTTGTTTATGGGAACACACTTGTTATGAATTTATCCTTATCATTTTTATATCGTGTGCTTGTTCTCAAAATTTTCTGAAAATGATGAATGAGATTTTTGGAATCTAAATGAATTAAACACAGAAATGATGTTTCTTAATGGGATTACAGGACTCTCTTTTAGAAAAAAAAAAAAAAAAGACTCATCTGATAATAATAAAAGATATTACTGTCCCTACATTAATTATATAAATGAGCAAGTAGAAGTAATGTTTTGTTTATTTGGGGGAGAAGATTTGTGGGAGAGTGAGTAAATGGATTTGAGGGTGAATTAATTGTTGTTTATTTCAATGGATTTGGAGGTAAATGAGAATGAATTTCGAAGTAAAGTTTATGAGAATTTGTGTAGGATTTGATTGATATGACAGATAAACAAAATTTGTTTAATGGGTAAAAAATGAAGATTACAAAAATGTTCTTAGTTATTAAAATAATATAAAATGATAATTGTTAATGTTATATTTAATTATAAAAATATTTATAAAGATTAAAAAATTAACATTAATTATTAAAATTAATTGTGCAAAATTTTTATTATAGTAAAATGAATTTTGTAATATTTTTAATTGTAATATTGTAACAGTTATTTTTAATTGTAATATTATATCATTCTCCAGCCATCGCAATTCTAACCCCAATAAA


Gene Sequence:
>Vu_05910(+)
ATGGCTCACCTCAACTGTCAACTGCCACCATCCAAGTTCTTCCACCTTCTCACCTCAAATATCCCTTACAACACACCAATTTCTCCAACCATTTTCCTTCACATCACCACTATGCGTTCCAGCAACGGTACCATATGTGTTGCATCAAGCACCCGAGCCTCTAACGGTAACGGAAGGCGCCACCGTGTGTACTACGGAGTGAGGTGTAGGAGCAGTGGAAAATGGGTTTCTGAAATCCGTGAGCCCAGAAAACCTAACATGATTTGGTTAGGGACATTTGCCACCCCTGAAATGGTGGTTATTGCCTATGACGTGGCAGCGCTTGCTCTTAAGGGGAAGGATGTCGAACTCAACTTCCCTGACTCCGCCTCTTCTTTTCCCGTTCCTGCTTCATTCGTTGCTTGTGACATTTAG