Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_05864 LG1 87007854 87009128 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   signal transduction
Cellular Component   located in   plasma membrane
Molecular Function   enables   protein binding
SNP Position Effect Amino acid change
G/A 87008091 synonymous_variant p.Tyr346Tyr
G/A 87008101 missense_variant p.Pro343Leu
C/A 87008110 missense_variant p.Gly340Val
G/A 87008115 synonymous_variant p.Phe338Phe
G/A 87008134 missense_variant p.Ser332Leu
C/T 87008142 synonymous_variant p.Ser329Ser
G/C 87008147 missense_variant p.Leu328Val
C/T 87008148 synonymous_variant p.Arg327Arg
C/T 87008162 missense_variant p.Ala323Thr
C/T 87008175 synonymous_variant p.Leu318Leu
C/T 87008182 missense_variant p.Gly316Glu
C/T 87008222 missense_variant p.Gly303Arg
C/T 87008267 missense_variant p.Glu288Lys
T/A 87008269 missense_variant p.Asn287Ile
C/T 87008295 synonymous_variant p.Ser278Ser
G/A 87008307 synonymous_variant p.Phe274Phe
G/A 87008326 missense_variant p.Ala268Val
G/A 87008423 missense_variant p.Arg236Trp
G/T 87008458 missense_variant p.Ser224Tyr
A/G 87008460 synonymous_variant p.Pro223Pro
C/A 87008806 missense_variant p.Trp108Leu
A/G 87008807 missense_variant p.Trp108Arg
C/G 87008930 missense_variant p.Asp67His
G/A 87008955 synonymous_variant p.Ser58Ser
G/A 87008956 missense_variant p.Ser58Phe
T/A 87008963 missense_variant p.Ile56Phe
C/A 87008965 missense_variant p.Cys55Phe
A/G 87008966 missense_variant p.Cys55Arg
G/T 87008976 synonymous_variant p.Thr51Thr
T/C 87008978 missense_variant p.Thr51Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_05864.1
MLSLTLTSSHFHLFLTLSLFLTSFVTDSATHWSDTQLLKELKNNLSPVSITPGSCIFSWDFSYDPCDNLFTDKFTCGFRCDAVVSGTTRLTELTLDPAGYSGTLSATWNLPYLQTLDVSNNFFSGPIPDSFSNLTRLTRLGLSKNSLTGTIPSSLSSLSNLQELYLDNNNLQGPIPVTFNRLTNLKRLEMQSNKLNGVLPSLSSLNNLYYLDLSFNLFTGRFPSSLPESLVQISMRNNSLSGALEPESLRNLNYLEVVDLTANRLSGAVPFALFELPSLQQVALSFNEFSHLEAPYALEMQSGVIAVDLSNNELGGFLPLFPALMPRLSSLSLENNKFVGMIPTQYALKTVFPEAGIAPFERLLLGGNYLFGAIPSPLMALQPGSAMVRLVDNCLYRCPISFFFCQGGQQKSFEECKRFSRFIP*


CDS Sequence:
>Vu_05864.1
ATGCTCTCTCTCACGCTCACTTCCTCTCACTTTCACCTTTTTCTCACTCTCTCACTCTTCCTAACATCATTCGTTACCGATTCAGCCACGCATTGGAGCGACACCCAGCTTCTCAAGGAACTAAAGAACAACCTTAGCCCTGTTTCCATTACCCCAGGCTCCTGCATCTTCTCCTGGGACTTCTCCTATGATCCCTGCGACAACCTCTTCACTGACAAGTTCACCTGCGGCTTCAGGTGCGACGCCGTCGTTTCGGGAACCACTCGCCTCACCGAACTCACACTCGATCCCGCTGGTTACTCCGGCACGCTCTCCGCCACCTGGAACCTCCCCTACCTCCAAACTCTCGACGTCTCAAACAACTTCTTCTCAGGCCCAATCCCCGATTCCTTCTCCAACCTCACTCGGTTAACTCGACTCGGTTTATCGAAAAACTCCCTCACCGGAACTATACCCTCTTCCTTATCTTCCCTCTCTAACCTTCAAGAGCTTTACCTCGACAACAACAACCTCCAAGGACCAATCCCCGTCACTTTTAACCGCCTCACCAACCTTAAACGCCTCGAAATGCAGTCCAACAAGCTAAACGGTGTCCTTCCCAGTTTGAGCTCTCTCAACAATCTTTACTACTTGGACCTAAGTTTCAATCTTTTCACCGGACGGTTCCCTTCCTCCCTGCCGGAATCTCTGGTCCAGATTTCAATGCGGAACAACAGCTTAAGTGGCGCGTTGGAACCCGAATCTCTGAGGAACTTGAACTACTTGGAAGTAGTGGATTTGACTGCCAACAGGTTAAGCGGTGCCGTTCCGTTTGCGCTGTTCGAGCTTCCCTCGTTGCAGCAGGTGGCGCTCTCTTTCAACGAGTTCTCGCACCTGGAAGCGCCTTACGCTTTGGAAATGCAAAGCGGAGTTATAGCGGTTGATCTGAGCAACAACGAGCTTGGGGGGTTTCTGCCGTTGTTCCCGGCGTTGATGCCGAGGCTTTCGTCTCTGTCGTTGGAGAACAATAAGTTCGTGGGAATGATTCCGACCCAGTACGCGTTGAAGACAGTTTTCCCCGAGGCTGGGATAGCTCCGTTCGAGAGGCTTCTGTTGGGGGGAAACTACTTGTTTGGAGCTATTCCGAGTCCTCTAATGGCGCTTCAACCGGGTTCTGCCATGGTCAGGCTTGTGGATAATTGCTTGTATAGGTGTCCTATCAGTTTCTTCTTTTGTCAGGGAGGTCAACAAAAGTCATTTGAAGAATGTAAGAGATTTAGCCGCTTCATTCCCTAG


Promoter Sequence:
>Vu_05864::LG1:87009128-87011128(-)
CGTGCCCGACACCTTATTCTGTTTACTGTGACAACAACTCTGCCATTCATATTGCCAAGAATCCCACCTTTCATGAACGAACAAAGCATATTGATATAGACTGTCATGTCACTCGACAAAAGCTTCAAGATGGTCTCATCAAACTTCTGCATGTTTCCTCTACCAGTCAAGTTGCAGATGTTTTCACTAAATCTCTTTATCCTTCTCCTTTCAATATGGTTACTTCCAAGCTAAACATGCATAACATTCATGTTCATCTTGAGGGGGGATGATAGAGTTATTATGGTCGTTCGTCATCATCTGATTGTTGCCGCTCGCCATTCGTCCTTATCTGGTTATTGTCGCTCATCTTATCGCTCGACAGGTACGATCGTCATCGTGCCTGTCGTTCGTTCTGCTCGACAGGGTCGCTCGTCATCGTGACTGTCGCTCTCACTGGTCGACAGGAACGCTCGTCCTCATGACATCGTGCTTGTCGTTCGTTCTGCTCGACAGGGTCACTCGTCATCGTGACTGTCGTTCTCACTGGTCGACAGGAACGCTCGTCCTCGTGACATCGTGCCTGTCGTTCGTTCCGCTCGACAGGGTCGCTCGACATCGTGACTGTCGCTCTCGCTGCTCGACAGGAACGCTCGTCCTTTGCTCTGTCGTTCGTTCTTTTGCTTTGTTGTTTCCGTTTGCTTTCTTTGTATCGATCGTTCCCTTTTAGGACGTTCGGTCTAGGAAGCGTTTTTTTACTTCCTGTATATATACCTTTACCTTGTTGTTTTATTTCAATTTTTTCATTCATTCAATTCATTTTTTCTTCAATACAATTCTTTTCTTCTTTGTTCTCTGGTTCTCTTTCTCCTTTTTTTTTCTGTTATCTTACAATGTTTTGTGTGTGTGTCTATGTGTTTGAGTGTATGTTTGTATCTCTGTTTGTATGTGTGCATGTGTATGTGTTTGTTAGCCTCTACGTGTGTGTTTGTGCGTTGTGTGTGTGTGTTTATGTATGTGTTTGTGTCCTTGTGTTTGTATGTGTACTTATGTATCTATGTTTATGTATGTATTTTTGTGTGTGTAAGTTTATCTATGTGTATTTGTGTGTCTGTGTCGTGTTTGTGTATTTGCATGTGTTTATATTTAGATAACAATTATATAATATTAGGATTGATAGTTTTACACTACAACAATATTTATAAGAGAAGATGTAATTTGAATAACACATTTGAAGTATTTAAATACTTTTACTATAGAATTTAAAAAATAAAAACATTATATTTTGAAACATAATCCCTTTTAGTTTTAATTTTAATGAGTACACAAATTATTCAATATATTTGATTGTTTTACCATTTTTATTAAAAATATACGTATATTGAAATAAGATTATTTCTAATTCAAAGCATTTAACATAATTAGTTTTAATTTTATTTTCCTCTTTTAAATTATATGAATAAAACTCAACTTAGCAAGTTTAAGCTAACTGTTATTATTCAAAACTTATCATCTAAAAATAAACTAACCACGTCTCAAAAAGAAATAAGCACTTAAACATTACTTCTAAGGGTATATAATGTAATATTATTATAAGTAAAATTTATAAACGATAAAATTTTAATTAATTGCACCAGTAAATAATAAATCTGTAAATATAAACGATAAAAATAATAAATCGTTACTTAAATAACTATTTTTTATGTAAAAAAACAAGAAAAAATGAATAAACACCTCGATATTATCCAAATCTGTAGATTTAATAAAAACAAATCCAAGAATCAAACAAAAAACCTACAAAACTTCGAAGTACGAATATAGAAGAAGTACTATTCTTCTCCTCTATTTTATTTTTTTCCTTGTAATAAACAGAACATATGCATTGCAGAAGCTTCTGACACCCAAAAGATCTCTGACACCATTCATTGTAGAAAAAAATAAGGTGAGTTAATGTTGAAAAAAGAAACCATTAATCTGAGCTCTTTCCTCCTTCACCGTCGTCTCCTATCACAAAACTCAAA


Gene Sequence:
>Vu_05864(-)
ATGCTCTCTCTCACGCTCACTTCCTCTCACTTTCACCTTTTTCTCACTCTCTCACTCTTCCTAACATCATTCGTTACCGATTCAGCCACGCATTGGAGCGACACCCAGCTTCTCAAGGAACTAAAGAACAACCTTAGCCCTGTTTCCATTACCCCAGGCTCCTGCATCTTCTCCTGGGACTTCTCCTATGATCCCTGCGACAACCTCTTCACTGACAAGTTCACCTGCGGCTTCAGGTGCGACGCCGTCGTTTCGGGAACCACTCGCCTCACCGAACTCACACTCGATCCCGCTGGTTACTCCGGCACGCTCTCCGCCACCTGGAACCTCCCCTACCTCCAAACTCTCGACGTCTCAAACAACTTCTTCTCAGGCCCAATCCCCGATTCCTTCTCCAACCTCACTCGGTTAACTCGACTCGGTTTATCGAAAAACTCCCTCACCGGAACTATACCCTCTTCCTTATCTTCCCTCTCTAACCTTCAAGAGCTTTACCTCGACAACAACAACCTCCAAGGACCAATCCCCGTCACTTTTAACCGCCTCACCAACCTTAAACGCCTCGAAATGCAGTCCAACAAGCTAAACGGTGTCCTTCCCAGTTTGAGCTCTCTCAACAATCTTTACTACTTGGACCTAAGTTTCAATCTTTTCACCGGACGGTTCCCTTCCTCCCTGCCGGAATCTCTGGTCCAGATTTCAATGCGGAACAACAGCTTAAGTGGCGCGTTGGAACCCGAATCTCTGAGGAACTTGAACTACTTGGAAGTAGTGGATTTGACTGCCAACAGGTTAAGCGGTGCCGTTCCGTTTGCGCTGTTCGAGCTTCCCTCGTTGCAGCAGGTGGCGCTCTCTTTCAACGAGTTCTCGCACCTGGAAGCGCCTTACGCTTTGGAAATGCAAAGCGGAGTTATAGCGGTTGATCTGAGCAACAACGAGCTTGGGGGGTTTCTGCCGTTGTTCCCGGCGTTGATGCCGAGGCTTTCGTCTCTGTCGTTGGAGAACAATAAGTTCGTGGGAATGATTCCGACCCAGTACGCGTTGAAGACAGTTTTCCCCGAGGCTGGGATAGCTCCGTTCGAGAGGCTTCTGTTGGGGGGAAACTACTTGTTTGGAGCTATTCCGAGTCCTCTAATGGCGCTTCAACCGGGTTCTGCCATGGTCAGGCTTGTGGATAATTGCTTGTATAGGTGTCCTATCAGTTTCTTCTTTTGTCAGGGAGGTCAACAAAAGTCATTTGAAGAATGTAAGAGATTTAGCCGCTTCATTCCCTAG