Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_05852 LG1 86860191 86863649 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 86860300 missense_variant p.Arg947Ser
G/A 86860515 stop_gained p.Gln876*
G/A 86861154 stop_gained p.Arg663*
C/T 86861322 missense_variant p.Gly607Ser
T/C 86861355 missense_variant p.Arg596Gly
T/A 86861442 missense_variant p.Thr567Ser
G/A 86861481 missense_variant p.Leu554Phe
C/T 86861955 missense_variant p.Gly396Ser
C/T 86861956 stop_gained p.Trp395*
G/A 86861975 missense_variant p.Ser389Leu
C/A 86862221 missense_variant p.Gly307Val
C/G 86862291 missense_variant p.Ala284Pro
A/G 86862417 missense_variant p.Ser242Pro
C/T 86862807 missense_variant p.Glu112Lys
G/T 86862845 missense_variant p.Pro99His
G/T 86862999 intron_variant
C/T 86863015 intron_variant
G/T 86863033 intron_variant
C/T 86863034 intron_variant
G/T 86863203 intron_variant
G/A 86863326 intron_variant
T/C,G 86863327 intron_variant
C/G 86863339 intron_variant
A/G 86863371 synonymous_variant p.Val93Val
G/C 86863395 synonymous_variant p.Gly85Gly
G/A 86863398 synonymous_variant p.Arg84Arg
G/A 86863407 synonymous_variant p.Cys81Cys
T/C 86863491 synonymous_variant p.Gln53Gln
G/T 86863559 missense_variant p.Leu31Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_05852.1
MEDGETKDVGIGNQTLTPYSLLPFTTMTKFLILLLLCARFLSCAHCASVTEIQALTSFKLNLHDPLGALNGWDPSTPLAPCDWRGVSCKNDRVTELRNALAGVLPAAIAALPNLQVLSLAQNNFTGAVPASVFCNVSLKAPSLRIVQLGFNRFTDFAWPQAATCFSILEVLDIQQNGVRGMFPLWLTNVTTLSVLDISGNALFGEVPTEIGNLWKLDELKMANNSFSGEIPPALVKCRSLRVLDFEGNRFSSEVPSFIGNLTALKVLSLGVNHFSGSVPVSFGGLVSLETMSLRGNRLNGSMPEEVMGLKNLTVLDLSGNQFSGHVSGEIGNLSKLMVLNLSGNGFYGEIPSTLGNLFRLTTLDLSKQNLSGKLPYEISGLPSLQVIALQENKLSGVIPEGFSSLTSLKYVNLSSNEFSGYVPKSYGFLRSLAVLSLSNNRIMGVIPPEIGNCPDIEILELRSNYFGGPIPADLSGLAHLKVLDLGKNNLTGALPEDISKCSELTVVLADHNELSGAIPGSLAKLSHLTVLDLSANQLSGEIPSNLNTIPGLVYFNVSGNKLEGEIPPMLGSKFNDSSVFASNQNLCGKPLDRKCEETDNRERNRSMVLIVIIAVGACLLALCCCFYISSLLRWRRRIKAAVSGEKKKSPRTSSGTSQGRSSTDTNGPKLVMFNAKITLAETIEATRQFDEENVLSRTRHGLVFKACYNDGMVLSIRKLPDGSLDENMFRKEAESLGRIRHRNLTVLRGYFAGPSDVRLLVYDYMPNGNLATLLQEASHLDGHVLNWPMRHLIALGIARGIAFLHQSSFIHGDIKPQNVLFDADFEAHLSDFGLDKLTVTNPVEASTSSTASVGTLGYVSPEAVLTGEPTKECDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQNGQIAELLEPGLFELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMADIVFMLEGCRVGPDIPSSAETTQPSPV*


CDS Sequence:
>Vu_05852.1
ATGGAAGATGGGGAAACTAAGGATGTTGGCATAGGTAACCAAACACTCACACCTTACTCTCTTCTTCCCTTCACTACCATGACTAAATTTCTCATCCTGCTGTTATTGTGCGCACGCTTCTTATCATGCGCCCACTGCGCCTCTGTCACCGAGATCCAAGCCTTGACGTCGTTCAAGCTCAACCTTCACGACCCTCTCGGCGCGCTTAACGGCTGGGACCCATCAACACCGTTAGCTCCTTGCGACTGGCGCGGCGTTTCTTGCAAGAACGACCGAGTTACCGAGTTACGGAACGCCCTCGCCGGCGTGTTACCGGCTGCGATTGCGGCCCTCCCGAACCTCCAGGTGTTGTCGCTCGCGCAGAACAACTTCACCGGCGCCGTTCCGGCTTCCGTTTTCTGCAACGTGTCGCTCAAAGCGCCGTCACTTCGCATCGTTCAGTTAGGGTTTAACCGTTTCACGGATTTCGCGTGGCCTCAAGCCGCCACGTGTTTCAGTATTCTTGAGGTTTTGGATATTCAGCAAAATGGCGTGCGCGGCATGTTTCCGCTGTGGCTAACCAACGTGACGACGTTGTCGGTTCTCGACATTTCCGGTAACGCACTTTTCGGCGAGGTTCCGACGGAAATTGGAAATCTCTGGAAATTGGATGAGCTGAAGATGGCCAATAATTCGTTCTCAGGCGAGATTCCGCCGGCATTAGTAAAATGTAGGTCCCTTCGCGTTCTTGATTTTGAAGGAAACCGGTTTTCCTCTGAGGTTCCTTCGTTTATAGGAAATCTGACAGCGCTGAAGGTTCTATCTCTTGGTGTGAACCATTTCTCTGGTTCTGTTCCGGTGAGTTTTGGGGGGCTTGTTTCTCTTGAAACTATGAGTTTAAGAGGTAATAGATTGAATGGTTCAATGCCAGAGGAAGTGATGGGGTTGAAGAATTTGACAGTGTTGGACCTCAGTGGAAACCAGTTTTCGGGTCATGTTTCTGGTGAAATTGGGAATCTGAGTAAATTAATGGTTCTGAATCTGAGTGGTAATGGCTTCTATGGAGAGATTCCTTCTACTTTGGGGAATCTTTTCAGGCTCACAACACTTGATTTGAGCAAACAAAATCTCTCCGGTAAATTGCCATATGAAATTTCGGGGCTTCCCAGCTTGCAGGTCATTGCTCTTCAAGAGAACAAGTTGTCTGGGGTGATACCTGAAGGGTTTAGCAGTTTGACCAGTTTGAAATACGTGAACCTAAGCTCTAACGAGTTTTCTGGGTATGTTCCTAAGAGCTATGGCTTTCTCCGATCTTTGGCTGTTCTTTCATTGTCTAATAACCGCATCATGGGAGTGATTCCCCCGGAAATTGGAAACTGCCCTGACATTGAAATTCTCGAGCTTAGATCAAATTACTTCGGGGGTCCCATTCCCGCGGATCTCTCTGGCCTAGCTCATTTGAAAGTCCTTGATTTAGGTAAGAACAACTTAACTGGGGCTTTGCCTGAGGATATCTCCAAATGCTCAGAGTTAACCGTTGTGTTAGCAGATCACAACGAACTTTCGGGTGCTATACCAGGGTCATTGGCCAAGTTATCACACCTAACTGTCCTGGATCTCTCTGCCAACCAATTGAGTGGCGAAATCCCCAGTAATCTAAACACCATCCCCGGTTTGGTGTACTTCAATGTCTCAGGCAACAAATTAGAAGGTGAGATTCCACCAATGTTGGGTTCTAAATTCAACGACTCCTCTGTATTTGCAAGCAACCAGAACTTGTGCGGGAAGCCATTGGATAGAAAGTGCGAAGAGACAGACAATAGGGAGAGAAATAGGTCGATGGTGTTAATCGTTATCATCGCGGTTGGAGCTTGCTTATTGGCATTGTGTTGCTGCTTCTACATCTCCAGCCTTCTGAGATGGCGCAGAAGGATCAAAGCCGCAGTGTCAGGGGAGAAGAAAAAGAGTCCAAGAACAAGTTCGGGAACAAGTCAAGGTCGAAGCAGCACCGACACGAACGGACCAAAACTCGTTATGTTCAACGCCAAAATCACACTCGCCGAAACAATCGAAGCAACAAGGCAATTCGACGAAGAAAACGTGCTGAGCAGAACAAGACACGGTTTAGTATTCAAGGCCTGCTACAACGACGGAATGGTCCTTTCCATTCGCAAGCTCCCAGACGGGTCACTAGACGAAAACATGTTCAGAAAAGAAGCCGAGTCGTTAGGAAGAATCAGGCACCGAAACCTAACAGTTCTCAGAGGCTACTTTGCAGGCCCATCGGATGTTAGACTCTTGGTCTACGATTACATGCCCAATGGGAACCTCGCAACGTTGCTCCAAGAAGCATCACACCTAGATGGTCACGTTCTGAATTGGCCAATGCGACACCTCATTGCATTAGGAATAGCCCGTGGCATAGCGTTTCTACACCAATCCTCATTTATCCACGGTGACATCAAACCCCAAAACGTGCTCTTTGATGCAGACTTCGAAGCCCATTTATCAGATTTCGGGTTGGACAAGTTAACAGTTACCAACCCAGTCGAAGCCTCAACTTCAAGCACAGCTTCAGTTGGCACGTTGGGTTACGTGTCCCCGGAGGCTGTACTAACAGGGGAACCCACGAAAGAGTGTGACGTGTACAGCTTCGGCATCGTTTTGTTGGAACTTCTCACCGGGAAGAGACCGGTGATGTTCACGCAGGATGAGGATATAGTGAAGTGGGTGAAGAAACAGTTACAGAACGGTCAAATTGCGGAGCTACTAGAGCCTGGTTTGTTTGAACTTGACCCAGAGTCTTCGGAATGGGAAGAGTTCTTGCTGGGTGTGAAAGTTGGTCTGCTTTGCACAGCCCCAGACCCTCTTGATCGACCAACCATGGCTGACATCGTGTTCATGCTCGAAGGTTGTCGTGTTGGACCCGATATTCCATCCTCCGCTGAAACCACACAACCTTCTCCGGTGTAA


Promoter Sequence:
>Vu_05852::LG1:86863649-86865649(-)
ACAACATCATCAAGAAACCTCAGCTTCGTAAAATTCAATTATCGTCGCCTTGTTCTTTATTTTGGCGCAAGCATTTGTCACCATGTTATTCCCATTCAAGACCAGAAGTGGATCAGATCCAAACCTCAATTCCAACATCAAATTATACAAACTGAGTTGAAACATCTGGGACAGATTGCTTGTTTCCATATACGACCAAGAGAATTTTCTTAGGAACCATCAAACATTATTAAAATTGACACGAAAGAATATATATAGATTCATTATGAGTAATCTACGGGTATTAAAATCATGTACGACCAAGAGAATTTTTTTTTATAAAATCATACGAATTTGATACAACTAATTCAAGTTTGATTTTTTTAAAAGGTATTCTACTTTAGTAATTTCATAATAAAATTACACCGTAATGATTAAAAAAAAGCAAGAAAAATGTTTGAAAAATTTAAGAAACACTTGAAAAGATAAAATAAAAGGAAAAATGGAGACCAGAGGCAATGCATGTTTTAGGAAGGAAGGTGATGTGAAAGAATAGGTGGTAATTAGATGCACTGATTAAAAGCCTCGACAACAAAACAGAAGGGAAAGTTAAACATGCAAAGATAAGATAGACAGACACATAGCTCAATGATTCTCCTATCACATCCTTCACAAACATTTAACTACGCCAATTCATTTAAAACCTACCACATTAGCCCAAGCACCCACATATATATCTAACTAAATTAAATCCAATCAGAGATCCTTCTCAATTATTTCTCCATTACCCTAGTTTTTGCAGCTGTGATCCATTTCATATATTTATATTTTCAAATTAATTCTATTCAAATTTTTTCCAACCAATAATTTCCAATTCCTTCGCATATTAATCTTCACACTTCTTCTGCTACTTATATAATTTACAATGAAAATAAATATTAATTTAGGCACACCTTTTTCGATTATATGAAGTGTCTTTTAATCCTAAATTTTGAAACGAACAATACTTTAATTGATATAGAAATTAACTGAGAATATAATAATACATTAGTGAATTAAAAATTATAAATAATTATTAAATTTAAATTCACTGAAATTTTTTAAAATTGGCTTGATGTCATTGAAAGAAATATTAATAAAGGGAAACGTTAGATTAGATACTATTCATAATGAATTTGGATGCAATAATTATGATATTTTTGCATAAATTGGAAAACAAGCGCCGAAAAATTTAAAATGAAAAAGAAAAAGGGCTTAAAATAATTTTTGGTCCATATCGGGTGGGTGGCCGCTGTTTCTTTTGTTTGCTGTAGATATTTAAAAGCTTAAAAGCAGAACGAAGAGAGTAAAATGAAGAATACAATAATTTACTATAAATAAGTAGATAGGAACAAAAATAGTAAGATAAATTGAAATAACGTAGGTAGAGAAAGTAATAAATATAAATTGAAGACATAAAAGAAAAACAGAGTAATAGAAACTTAAGCTTATTATGAGGGACAGTAAGTTTGCCCCAAATAACACACTACACATACCTCTTCCCTTCTGCCGGTCTATTTCATGTCCTACCGAAGGACGCTCTTCCCTTCATTACTTCCTTTTTTGCTTTATTTCGGTACTGCATACACAAAACAACACCTACATGCACCAATACACCAATACACCAATACACCTACATATCATAGTTCATTTTTTTTTAATAATTTTGAAATAAAAAAATATATTATTTTATTTAAGATATGATAAAGTAGAAAAGATTGAGGTACCACGGGAGAACTGCATTAAATATGTGTGTACAGGAGATTAAAGACAGAGAGTGATAAGAGAGAGAATATGTATGGTCCATCTGTGTTCAGCTACCCACCCCATCGAACAAATTCGAGTGGAATAACAGGTTCGATATGTGAAGTGCAAAACAGATAAATATGGATATTTTTGAAATTAGTATATATAAATATTCCAAGAGAAACATAAACCTATGGAGTGTTATGGTGGAAGAGGTTTGAAGGTGATGGAAGGTG


Gene Sequence:
>Vu_05852(-)
ATGGAAGATGGGGAAACTAAGGATGTTGGCATAGGTAACCAAACACTCACACCTTACTCTCTTCTTCCCTTCACTACCATGACTAAATTTCTCATCCTGCTGTTATTGTGCGCACGCTTCTTATCATGCGCCCACTGCGCCTCTGTCACCGAGATCCAAGCCTTGACGTCGTTCAAGCTCAACCTTCACGACCCTCTCGGCGCGCTTAACGGCTGGGACCCATCAACACCGTTAGCTCCTTGCGACTGGCGCGGCGTTTCTTGCAAGAACGACCGAGTTACCGAGTTACGTCTGCCTCGCCTTCAACTCAGTGGCCTACTTGACGACCGCATTTCAGACCTACGCATGCTTCGAAGGCTGAGCCTTCGCTCTAACTCCTTCAACGGCACAATTCCCCCATCCCTCTCCAAATGCACGCTCCTACGCGCCTTGTTCCTACAGTATAACGACCTCTCCGGCCAACTCCCGCCGGAGATCGGAAACCTCGCCGCTCTCCAGATTCTCAACGTTGCCGGCAACAACCTCTCTGGTGAAATACCCGCCGAGCTTCCCCTCCATCTCAAGTACGTTGACCTCTCCGCCAACGCCTTCTCCGGCCTGATTCCGACCACCATCGCCGGTCTTTCCGAGCTTCGGCTTATCAACCTCTCCTACAACAAGTTCTCGGGCCAGATTCCTGCGCGCATTGGAGAGCTTCAGAATCTGCAATACCTTTGGCTCGATCACAATGTTCTCGGCGGAACCTTACCTTCGTCTCTAGCGAATTGTTCCTCGCTCGTGCATTTGAGCGTGGAAGGGAACGCCCTCGCCGGCGTGTTACCGGCTGCGATTGCGGCCCTCCCGAACCTCCAGGTGTTGTCGCTCGCGCAGAACAACTTCACCGGCGCCGTTCCGGCTTCCGTTTTCTGCAACGTGTCGCTCAAAGCGCCGTCACTTCGCATCGTTCAGTTAGGGTTTAACCGTTTCACGGATTTCGCGTGGCCTCAAGCCGCCACGTGTTTCAGTATTCTTGAGGTTTTGGATATTCAGCAAAATGGCGTGCGCGGCATGTTTCCGCTGTGGCTAACCAACGTGACGACGTTGTCGGTTCTCGACATTTCCGGTAACGCACTTTTCGGCGAGGTTCCGACGGAAATTGGAAATCTCTGGAAATTGGATGAGCTGAAGATGGCCAATAATTCGTTCTCAGGCGAGATTCCGCCGGCATTAGTAAAATGTAGGTCCCTTCGCGTTCTTGATTTTGAAGGAAACCGGTTTTCCTCTGAGGTTCCTTCGTTTATAGGAAATCTGACAGCGCTGAAGGTTCTATCTCTTGGTGTGAACCATTTCTCTGGTTCTGTTCCGGTGAGTTTTGGGGGGCTTGTTTCTCTTGAAACTATGAGTTTAAGAGGTAATAGATTGAATGGTTCAATGCCAGAGGAAGTGATGGGGTTGAAGAATTTGACAGTGTTGGACCTCAGTGGAAACCAGTTTTCGGGTCATGTTTCTGGTGAAATTGGGAATCTGAGTAAATTAATGGTTCTGAATCTGAGTGGTAATGGCTTCTATGGAGAGATTCCTTCTACTTTGGGGAATCTTTTCAGGCTCACAACACTTGATTTGAGCAAACAAAATCTCTCCGGTAAATTGCCATATGAAATTTCGGGGCTTCCCAGCTTGCAGGTCATTGCTCTTCAAGAGAACAAGTTGTCTGGGGTGATACCTGAAGGGTTTAGCAGTTTGACCAGTTTGAAATACGTGAACCTAAGCTCTAACGAGTTTTCTGGGTATGTTCCTAAGAGCTATGGCTTTCTCCGATCTTTGGCTGTTCTTTCATTGTCTAATAACCGCATCATGGGAGTGATTCCCCCGGAAATTGGAAACTGCCCTGACATTGAAATTCTCGAGCTTAGATCAAATTACTTCGGGGGTCCCATTCCCGCGGATCTCTCTGGCCTAGCTCATTTGAAAGTCCTTGATTTAGGTAAGAACAACTTAACTGGGGCTTTGCCTGAGGATATCTCCAAATGCTCAGAGTTAACCGTTGTGTTAGCAGATCACAACGAACTTTCGGGTGCTATACCAGGGTCATTGGCCAAGTTATCACACCTAACTGTCCTGGATCTCTCTGCCAACCAATTGAGTGGCGAAATCCCCAGTAATCTAAACACCATCCCCGGTTTGGTGTACTTCAATGTCTCAGGCAACAAATTAGAAGGTGAGATTCCACCAATGTTGGGTTCTAAATTCAACGACTCCTCTGTATTTGCAAGCAACCAGAACTTGTGCGGGAAGCCATTGGATAGAAAGTGCGAAGAGACAGACAATAGGGAGAGAAATAGGTCGATGGTGTTAATCGTTATCATCGCGGTTGGAGCTTGCTTATTGGCATTGTGTTGCTGCTTCTACATCTCCAGCCTTCTGAGATGGCGCAGAAGGATCAAAGCCGCAGTGTCAGGGGAGAAGAAAAAGAGTCCAAGAACAAGTTCGGGAACAAGTCAAGGTCGAAGCAGCACCGACACGAACGGACCAAAACTCGTTATGTTCAACGCCAAAATCACACTCGCCGAAACAATCGAAGCAACAAGGCAATTCGACGAAGAAAACGTGCTGAGCAGAACAAGACACGGTTTAGTATTCAAGGCCTGCTACAACGACGGAATGGTCCTTTCCATTCGCAAGCTCCCAGACGGGTCACTAGACGAAAACATGTTCAGAAAAGAAGCCGAGTCGTTAGGAAGAATCAGGCACCGAAACCTAACAGTTCTCAGAGGCTACTTTGCAGGCCCATCGGATGTTAGACTCTTGGTCTACGATTACATGCCCAATGGGAACCTCGCAACGTTGCTCCAAGAAGCATCACACCTAGATGGTCACGTTCTGAATTGGCCAATGCGACACCTCATTGCATTAGGAATAGCCCGTGGCATAGCGTTTCTACACCAATCCTCATTTATCCACGGTGACATCAAACCCCAAAACGTGCTCTTTGATGCAGACTTCGAAGCCCATTTATCAGATTTCGGGTTGGACAAGTTAACAGTTACCAACCCAGTCGAAGCCTCAACTTCAAGCACAGCTTCAGTTGGCACGTTGGGTTACGTGTCCCCGGAGGCTGTACTAACAGGGGAACCCACGAAAGAGTGTGACGTGTACAGCTTCGGCATCGTTTTGTTGGAACTTCTCACCGGGAAGAGACCGGTGATGTTCACGCAGGATGAGGATATAGTGAAGTGGGTGAAGAAACAGTTACAGAACGGTCAAATTGCGGAGCTACTAGAGCCTGGTTTGTTTGAACTTGACCCAGAGTCTTCGGAATGGGAAGAGTTCTTGCTGGGTGTGAAAGTTGGTCTGCTTTGCACAGCCCCAGACCCTCTTGATCGACCAACCATGGCTGACATCGTGTTCATGCTCGAAGGTTGTCGTGTTGGACCCGATATTCCATCCTCCGCTGAAACCACACAACCTTCTCCGGTGTAA