Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_05762 LG1 85907984 85910800 PREDICTED: TMV resistance protein N-like isoform X1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   signal transduction, response to lipid, response to alcohol
Cellular Component   located in   chloroplast
Molecular Function   enables   ADP binding, ADP binding
SNP Position Effect Amino acid change
C/G 85908023 5_prime_UTR_variant
T/G 85908041 5_prime_UTR_premature_start_codon_gain_variant
G/T 85908071 5_prime_UTR_variant
G/A 85908119 missense_variant p.Asp8Asn
A/C 85908137 missense_variant p.Asn14His
C/T 85908313 synonymous_variant p.Val72Val
G/A 85908314 missense_variant p.Val73Ile
G/A 85908324 missense_variant p.Arg76Lys
C/T 85908387 missense_variant p.Thr97Ile
A/G 85908629 intron_variant
T/C 85908658 intron_variant
T/A 85908750 intron_variant
T/C 85908809 synonymous_variant p.Ser165Ser
C/T 85908863 synonymous_variant p.Tyr183Tyr
A/G 85908906 missense_variant p.Thr198Ala
G/C 85908928 missense_variant p.Arg205Pro
C/A 85909176 missense_variant p.Leu288Met
G/A 85909254 missense_variant p.Val314Ile
G/A 85909286 missense_variant p.Met324Ile
A/C 85909509 missense_variant p.Thr399Pro
T/C 85909595 synonymous_variant p.Asp427Asp
C/T 85909604 synonymous_variant p.His430His
T/C 85909631 synonymous_variant p.Asp439Asp
T/C 85909975 upstream_gene_variant
C/G 85909988 missense_variant p.Thr528Ser
T/C 85910133 synonymous_variant p.Asp576Asp
T/A 85910198 missense_variant p.Met598Lys
A/G 85910215 missense_variant p.Ile604Val
C/T 85910348 missense_variant p.Pro648Leu
A/C 85910398 missense_variant p.Thr665Pro
C/T 85910547 synonymous_variant p.Asp714Asp
T/A 85910639 missense_variant p.Leu745His
C/A 85910717 3_prime_UTR_variant
T/C 85910749 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_05762.1
MATSTCCDVSEIRNDVFISFTGIDVRRGLLSHLKRELHRKHIDAYVDERLDKGGEISSSLLRAIEGSKILLVVFSRHYASSHWCLEELAKMIECMETNKQIVLPVFFNIDPSHVRHQYGDYGYALAEHEEEFKENMLKVQSWRSALKKAGRLSGFHYPTNYENESDLVDEIVEDISVKLSELYPSESNGLVGIDQNVTQVQSLLRVESNEVLFVGIWGMGGIGKTTIARAIFDKCSLQYDGCCFFNVREELERHGFSNLRERLIYELLEGEGLHTNKARFFSSALRMLGRKKVMVVLDDVNTSEELRYLVTKPVCFGAGSRVIMTSRDQDVLTSGGLDQIHEVKEMKPLDSLKLFCLIAFNESQPKMGYEKLTEEVLKIAQGNPLALKVLGAEFHSRSTINTWKCALSKFKKYPNEKIQSVLRFSYDGLHEVEKKAFLDIAFFFQEDTKAYVIEQLDAWGLHGASGVEVLQRKALITVSNENIIQMHDLIRQMGCEIVRQECITHPGRRTRLRDKEEVYNVLRYKLGTDKVEGMQVDVFRIKDLSLKVGTFKKMPCLRFLKFYLPDDNLFLPPNPDGTLWYEKRHFPLLLSAWCKDLMRVACEIQIKCVDYVYFDGYSHSSLTSTLRNRGREIRSSTSISLTELTGSPGDLECSDMLDQQFKILTDGLLCLRSTYYLKLSKSTGQDSGKPKLHVLFDSLRFYERISVGKLKNSDIEGNRMLFLYFAGFNFLFRPFLLRRPWFHFLFSFRFAFFCTLFLYLLWKMIL*


CDS Sequence:
>Vu_05762.1
ATGGCAACCTCAACTTGTTGTGATGTTAGTGAAATAAGAAATGATGTGTTCATCAGCTTCACAGGCATAGATGTCCGCAGAGGTCTTCTTAGCCATTTGAAAAGAGAATTACATCGCAAACATATTGATGCCTATGTGGACGAGAGACTTGATAAAGGGGGTGAAATATCATCCTCACTTCTCAGAGCAATTGAAGGCTCAAAAATTTTATTGGTCGTATTCTCCAGACACTATGCTTCATCACATTGGTGCCTGGAAGAGCTTGCCAAAATGATTGAATGCATGGAAACAAATAAACAGATTGTCCTACCTGTTTTCTTCAATATAGATCCATCACACGTGCGACACCAATATGGAGATTATGGATATGCTTTAGCTGAACATGAAGAAGAGTTCAAGGAAAACATGCTCAAGGTACAAAGTTGGAGATCAGCTTTGAAAAAAGCTGGTCGTTTATCCGGATTTCATTATCCAACAAATTATGAGAATGAATCTGATCTTGTCGATGAAATTGTGGAAGACATTTCAGTAAAATTGAGCGAGTTATACCCAAGTGAATCAAATGGTCTTGTTGGAATTGATCAAAACGTTACACAGGTTCAGTCGTTACTGCGAGTAGAATCAAATGAAGTTCTTTTTGTTGGAATTTGGGGCATGGGTGGCATAGGTAAGACAACCATTGCTCGTGCTATATTTGATAAATGTTCTCTTCAGTATGATGGCTGCTGTTTCTTCAATGTAAGAGAAGAATTGGAACGGCATGGATTCAGCAATTTACGAGAGAGGCTCATTTATGAACTACTTGAAGGAGAAGGTCTCCATACAAACAAAGCAAGATTCTTCAGTTCTGCTCTAAGAATGCTGGGTCGGAAAAAAGTTATGGTAGTGCTTGATGATGTAAATACTTCTGAAGAATTAAGGTATCTGGTCACAAAACCAGTTTGCTTCGGTGCAGGGAGTAGGGTGATAATGACAAGTAGAGATCAGGACGTGCTTACAAGTGGAGGACTTGATCAAATTCATGAGGTCAAGGAAATGAAACCTCTTGATTCTCTCAAGCTCTTCTGCTTGATTGCCTTCAATGAAAGCCAACCCAAAATGGGATATGAAAAACTAACTGAAGAGGTGCTTAAAATCGCCCAGGGTAATCCCTTAGCCTTAAAAGTTTTAGGTGCAGAATTCCATTCCAGAAGTACTATAAACACATGGAAGTGTGCATTAAGCAAATTCAAGAAGTATCCCAATGAGAAAATTCAAAGTGTGTTAAGATTCAGTTATGATGGACTGCACGAAGTAGAGAAAAAGGCCTTCCTAGATATTGCATTCTTTTTCCAAGAAGACACCAAAGCCTATGTTATAGAGCAACTAGATGCATGGGGACTTCATGGAGCTAGTGGAGTGGAGGTTCTCCAACGGAAAGCTCTTATAACAGTTTCAAATGAGAATATAATACAAATGCATGACCTGATACGACAAATGGGTTGCGAAATAGTTCGTCAAGAATGTATTACACATCCAGGAAGACGCACCCGATTGAGGGATAAAGAGGAAGTATACAATGTATTGAGGTATAAGCTGGGAACCGATAAGGTGGAGGGCATGCAAGTAGATGTGTTTCGAATTAAAGATTTGTCGCTGAAAGTAGGAACTTTTAAAAAGATGCCTTGTCTGAGATTTCTGAAATTTTATCTCCCCGATGATAATCTTTTCCTGCCGCCAAACCCGGATGGAACGTTATGGTATGAAAAACGTCACTTCCCATTGCTTTTATCTGCATGGTGCAAAGACCTCATGAGAGTTGCATGTGAGATTCAGATAAAATGTGTTGACTACGTTTATTTTGATGGTTACTCACATTCTTCCCTAACATCGACGCTAAGAAACCGTGGAAGGGAAATACGATCGTCGACCTCGATATCATTGACCGAACTAACTGGTTCCCCCGGGGATCTTGAATGCTCAGATATGCTTGATCAACAATTTAAGATTCTGACTGATGGGCTACTTTGTCTGAGATCAACTTATTATCTTAAGCTTTCTAAGAGCACGGGGCAAGACAGTGGAAAACCCAAGTTGCACGTTCTGTTTGACAGCTTAAGGTTTTATGAACGAATATCTGTGGGCAAGTTGAAGAACTCCGACATCGAGGGTAATCGGATGTTGTTTCTTTATTTTGCAGGTTTTAACTTTCTATTTCGTCCCTTTCTTCTTAGGAGACCTTGGTTTCATTTCCTCTTTTCTTTTCGTTTTGCATTCTTCTGCACTTTATTTTTGTATCTTTTATGGAAAATGATCCTTTGA


Promoter Sequence:
>Vu_05762::LG1:85905984-85907984(+)
TCATTTTAATTTTTTTTAAATATTTACACAGTGCAACCTCTTCAAACATGTCATGTATTCATCAAACTGCACAACTCACTCAGGTTTGGCTACAGTGACATTTGCACAATTATGTTTTTAACGTCATGAGCGAAAAGGACCGCATTGAACATTTTTTAACGAAATATGAGATCTTACTGAACTCTTTTAAAAGGTAAGATCACTTTGAACCAAACCTAAAAGTAGAGACCAAATAATATATTAAACCTATAAAATATTACATAAGAGAAATATTAAGTTTAAAAATATTTCAAATGTCTCTTTACTTTCTTTTCCTAAATTCTAATGATATTTGTTTTTTTATACACTGATTAATAAAAATGATAATACACCACTATAATAAAATCATACCGAGAACAAAACATTGAACTAATAATTGTTAGACTGAAATCTTTTATTTTAAATTTCAATCTATGGTGAATGGTGATAAACATTATTAATGATAATAATGACATTAAATTATTATATATTAATAATAAATGAAATATTATCATACAATTATGATGATAAAATTACATTTATAATAAAGAATTAAAAAATAAAATAATTATGTAAGAAATCATCAAAGTATTCTTGATAAAAATAAACAAACAAATAAAGTATTATATATAAGTAAAAATATAATATGTGTTTTGAAAATAATTTGGTTCGCACAAAAGAAAAAAAATGTATATTTAAGGAAATGATATAACATGGAAAATATATTGGAGATTTGATAAAACTTTCTAGATTTAGAACTAATTGAACCATTAAGAGATAATGAAAATTATGTTAACGAATGTAAAATTTCTTAAATAAAACAAAAGTTGAAGATTAAAAAGAATAAAAAAGATTAATGTTTTTTTCTATTATTAATAGATGAAAGGTTATGAAATTAATAATTCCAAATCAAATATTTTCACGTGAAGAAAATAATAAATACATATCACTAAAAATAATAAATTGTAAGATGTATTTGATTCATTGAAATTAATGATACACTGTTCAACATAATCGCACAAAAAAATTGCAATCAAAATTGTGATAGTAGGTAAAGATATAAGTAAATTGTGTAAATTCAGAATAAGCTAAACAATTAGAAGAAAAAAATAAATAAATAAAAAAAGAGAATTACGAGATAAAATAATAAGATTTCGATAATATCCACCAAAATATGTTTATTTGTCATTTCTATTATATAGAAGATAAATAATGTATCACCTAGGTTTTAATAAAAAATGCTCACTAAACAACACGTTAAAAAAAAATGTCAGACTTTTATTAACCAATTTAGAATATATATTTTCTAAATTGATTATGAGTATAACCAATATAGAATTCATCAACTCTATTGAGTGTTCTTAATAATTCAACATTAGTTTTATTCTTAAATAATGTAGAATAAATAATGTAGAATGTGCGGGTATTCTGTATAAATGTAATCATAAACCAATGCAGAAAGTACATTAGTTCATAATTAAAATTTAAAAAATTGATTTCAGTGACGACTCTTCCTATTTCAATTTTAGAATTGACTATAAAAACTAATATAAAATAATTTTATCGTAGTATCTAGTTCATTTTCCTTGTCAAGAATTGAAGAATATGTGTTATATCTCATACTAGTTTTCATTCATCGTATATAATGATCAGTCTTTAACAAATTACTGTCAAATTTGGAGTGCGTTTTCATTTTACAAGTATTTAATAAATTTTATACCAAATTATAATATTTATTGTAAAATACAAAATTCTTTTTGAATTCGTATATTATGGATTTTAAGATTTTTCCTTATGCATGTATTTGGTACAATTTATTTGAAGTGAGTGGATAAAACTTGGAACATATTCACATAACAGGAAATGCCGAATAACTTTTCGCGTAAAAATCTTTAGCGAATCCAATTCTGATGTACTCGTTACTTTACTTTTCCTCAGTTCAGTTCATAATGAAATAACATAAAATTACCACAAACAAGTCG


Gene Sequence:
>Vu_05762(+)
GCCTCATTGAAGCATAGAAAATAAAGCTTTCAATATTTGCTCCTTAGTTATTTGATTTTTGTGGGAAGGACAGATTTGATTCATTAAGAAAAATATTGGTCTTGATTATGCGAAATGGCAACCTCAACTTGTTGTGATGTTAGTGAAATAAGAAATGATGTGTTCATCAGCTTCACAGGCATAGATGTCCGCAGAGGTCTTCTTAGCCATTTGAAAAGAGAATTACATCGCAAACATATTGATGCCTATGTGGACGAGAGACTTGATAAAGGGGGTGAAATATCATCCTCACTTCTCAGAGCAATTGAAGGCTCAAAAATTTTATTGGTCGTATTCTCCAGACACTATGCTTCATCACATTGGTGCCTGGAAGAGCTTGCCAAAATGATTGAATGCATGGAAACAAATAAACAGATTGTCCTACCTGTTTTCTTCAATATAGATCCATCACACGTGCGACACCAATATGGAGATTATGGATATGCTTTAGCTGAACATGAAGAAGAGTTCAAGGAAAACATGCTCAAGGTACAAAGTTGGAGATCAGCTTTGAAAAAAGCTGGTCGTTTATCCGGATTTCATTATCCAACAAATTATGAGTAAGTTCCTTTTCTTTTTCTTTCTTTTTCCTTTTGTCTTTTACATACACTGATGTATCTTTTCTTTTTCACCATTTACTCTTATACAAGAAAAGTTTGTGTGCAAAGTGATTAACAATTTAGTTGATGGATTCAGAAACAAAGAAATAGTGTTGAAAAAGAAAAGTTGTATGAATTACATTTATTATATATCTGCTTACTTTCTTCTAAATGCTAGGAATGAATCTGATCTTGTCGATGAAATTGTGGAAGACATTTCAGTAAAATTGAGCGAGTTATACCCAAGTGAATCAAATGGTCTTGTTGGAATTGATCAAAACGTTACACAGGTTCAGTCGTTACTGCGAGTAGAATCAAATGAAGTTCTTTTTGTTGGAATTTGGGGCATGGGTGGCATAGGTAAGACAACCATTGCTCGTGCTATATTTGATAAATGTTCTCTTCAGTATGATGGCTGCTGTTTCTTCAATGTAAGAGAAGAATTGGAACGGCATGGATTCAGCAATTTACGAGAGAGGCTCATTTATGAACTACTTGAAGGAGAAGGTCTCCATACAAACAAAGCAAGATTCTTCAGTTCTGCTCTAAGAATGCTGGGTCGGAAAAAAGTTATGGTAGTGCTTGATGATGTAAATACTTCTGAAGAATTAAGGTATCTGGTCACAAAACCAGTTTGCTTCGGTGCAGGGAGTAGGGTGATAATGACAAGTAGAGATCAGGACGTGCTTACAAGTGGAGGACTTGATCAAATTCATGAGGTCAAGGAAATGAAACCTCTTGATTCTCTCAAGCTCTTCTGCTTGATTGCCTTCAATGAAAGCCAACCCAAAATGGGATATGAAAAACTAACTGAAGAGGTGCTTAAAATCGCCCAGGGTAATCCCTTAGCCTTAAAAGTTTTAGGTGCAGAATTCCATTCCAGAAGTACTATAAACACATGGAAGTGTGCATTAAGCAAATTCAAGAAGTATCCCAATGAGAAAATTCAAAGTGTGTTAAGATTCAGTTATGATGGACTGCACGAAGTAGAGAAAAAGGCCTTCCTAGATATTGCATTCTTTTTCCAAGAAGACACCAAAGCCTATGTTATAGAGCAACTAGATGCATGGGGACTTCATGGAGCTAGTGGAGTGGAGGTTCTCCAACGGAAAGCTCTTATAACAGTTTCAAATGAGAATATAATACAAATGCATGACCTGATACGACAAATGGGTTGCGAAATAGTTCGTCAAGAATGTATTACACATCCAGGAAGACGCACCCGATTGAGGGATAAAGAGGAAGTATACAATGTATTGAGGTATAAGCTGGTAAGAGACATAAACTATATTACTTCACAAGTGTGTTTCAAATTTCAACCAGTGTGAAATTATGACTCAGTGTTATGCTGATTTTTTTCAGGGAACCGATAAGGTGGAGGGCATGCAAGTAGATGTGTTTCGAATTAAAGATTTGTCGCTGAAAGTAGGAACTTTTAAAAAGATGCCTTGTCTGAGATTTCTGAAATTTTATCTCCCCGATGATAATCTTTTCCTGCCGCCAAACCCGGATGGAACGTTATGGTATGAAAAACGTCACTTCCCATTGCTTTTATCTGCATGGTGCAAAGACCTCATGAGAGTTGCATGTGAGATTCAGATAAAATGTGTTGACTACGTTTATTTTGATGGTTACTCACATTCTTCCCTAACATCGACGCTAAGAAACCGTGGAAGGGAAATACGATCGTCGACCTCGATATCATTGACCGAACTAACTGGTTCCCCCGGGGATCTTGAATGCTCAGATATGCTTGATCAACAATTTAAGATTCTGACTGATGGGCTACTTTGTCTGAGATCAACTTATTATCTTAAGCTTTCTAAGAGCACGGGGCAAGACAGTGGAAAACCCAAGTTGCACGTTCTGTTTGACAGCTTAAGGTTTTATGAACGAATATCTGTGGGCAAGTTGAAGAACTCCGACATCGAGGGTAATCGGATGTTGTTTCTTTATTTTGCAGGTTTTAACTTTCTATTTCGTCCCTTTCTTCTTAGGAGACCTTGGTTTCATTTCCTCTTTTCTTTTCGTTTTGCATTCTTCTGCACTTTATTTTTGTATCTTTTATGGAAAATGATCCTTTGACACCCCATACCTCCCTCTTGTCAACTGCTGGATGGGCAAAAATTTGTGACTGCAATTAAATTTTAACTTTTATTTAAACTCTATTGGGGATTCG