Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_05756 LG1 85849427 85851228 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   polyprenol biosynthetic process, protein glycosylation, protein glycosylation, polyprenol biosynthetic process, protein glycosylation, polyprenol biosynthetic process, protein glycosylation, protein glycosylation, polyprenol biosynthetic process
Cellular Component   is active in   endoplasmic reticulum
Cellular Component   located in   endoplasmic reticulum
Molecular Function   enables   protein binding, polyprenyltransferase activity
Pathway   B 09109 Metabolism of terpenoids and polyketides   C 00900 Terpenoid backbone biosynthesis [PATH:ko00900]
SNP Position Effect Amino acid change
A/T 85849427 initiator_codon_variant p.Met1?
T/A 85849443 missense_variant p.Ile6Lys
C/T 85849518 missense_variant p.Thr31Met
C/T 85849523 synonymous_variant p.Leu33Leu
G/T 85849534 missense_variant p.Glu36Asp
A/G 85849547 missense_variant p.Thr41Ala
C/T 85849622 missense_variant p.Arg66Cys
G/A 85849634 missense_variant p.Val70Met
G/A 85849703 missense_variant p.Ala93Thr
G/A 85849722 missense_variant p.Arg99Lys
T/C 85849729 synonymous_variant p.Asp101Asp
C/G 85849730 missense_variant p.Gln102Glu
T/G 85849802 missense_variant p.Ser126Ala
T/C 85849804 synonymous_variant p.Ser126Ser
A/G 85849806 missense_variant p.Tyr127Cys
G/T 85849810 missense_variant p.Arg128Ser
T/C 85849827 missense_variant p.Val134Ala
A/G 85849846 synonymous_variant p.Leu140Leu
T/A 85849848 missense_variant p.Phe141Tyr
C/G 85849926 missense_variant p.Thr167Ser
T/G 85849955 missense_variant p.Phe177Val
C/T 85849974 missense_variant p.Ala183Val
T/A 85850069 upstream_gene_variant
A/G 85850073 upstream_gene_variant
A/G 85850083 upstream_gene_variant
A/T 85850133 upstream_gene_variant
A/G 85850208 upstream_gene_variant
G/T 85850217 upstream_gene_variant
A/T 85850222 upstream_gene_variant
A/T 85850228 upstream_gene_variant
C/G 85850247 upstream_gene_variant
T/G 85850267 upstream_gene_variant
G/T 85850511 upstream_gene_variant
T/G 85850519 upstream_gene_variant
A/T 85850589 upstream_gene_variant
T/C 85850600 upstream_gene_variant
T/G 85850634 upstream_gene_variant
C/G 85850648 upstream_gene_variant
G/C 85850651 upstream_gene_variant
G/A 85850663 upstream_gene_variant
G/T 85850686 upstream_gene_variant
G/A 85850690 upstream_gene_variant
C/T 85850700 upstream_gene_variant
T/C 85850766 synonymous_variant p.Cys222Cys
T/G 85850770 missense_variant p.Ser224Ala
C/T 85850826 upstream_gene_variant
G/A 85850829 upstream_gene_variant
A/T 85850857 upstream_gene_variant
A/G 85850906 upstream_gene_variant
G/T 85850930 upstream_gene_variant
G/C 85851012 upstream_gene_variant
C/T 85851065 synonymous_variant p.Asp234Asp
T/G 85851139 missense_variant p.Ile259Ser
C/G 85851202 missense_variant p.Ser280Cys
A/G 85851210 missense_variant p.Ser283Gly

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_05756.1
MELMRIKIEELLEQESLINEYGVRLHFIGDTKLLTEPVRATVEKATRVTAHNNQRVLLICVAYTSRHEIVHAVQECCKEKLNEVQALKEEKVANGAFSRIDQGLKGNDFDLLSQDSCKEYRNAIKSYRTEVESVARNDGLFENNIENHIGNDTEAETTLYNGLVELTEERKDIQDEFPFIKLADIEKNMYMAVAPDPDILIRSSGEARLSHLYVKSDVWGFGVVHLEMPDRREETLPHSTVCISSFLDQHPKLLEPLGTSYDYFCSNFMTHIGFPINEVNLFLVHLGM*


CDS Sequence:
>Vu_05756.1
ATGGAACTGATGCGGATAAAGATAGAGGAGTTGCTTGAACAAGAAAGTCTCATTAATGAGTATGGTGTTAGATTACATTTCATTGGAGACACGAAACTACTGACAGAGCCTGTCAGGGCTACTGTGGAAAAGGCAACGAGAGTTACTGCCCACAACAACCAGAGAGTTCTTTTGATTTGTGTAGCGTATACTTCTCGTCACGAGATTGTGCATGCTGTTCAAGAATGTTGCAAGGAAAAATTGAATGAAGTTCAAGCGTTAAAAGAAGAGAAAGTTGCAAATGGTGCGTTTTCAAGAATTGATCAGGGCCTGAAAGGAAATGATTTTGATTTGCTTTCTCAAGATTCATGTAAAGAATATCGAAATGCAATCAAATCTTATAGGACCGAAGTAGAAAGTGTTGCAAGGAATGATGGTTTATTTGAGAATAATATCGAGAATCATATCGGTAACGACACTGAAGCTGAAACGACATTATACAATGGGCTGGTTGAATTGACTGAAGAGAGAAAGGATATACAAGATGAGTTTCCTTTTATAAAACTGGCGGATATTGAGAAGAACATGTACATGGCAGTTGCACCTGACCCAGACATCTTGATCCGATCTTCTGGAGAAGCTCGCCTCAGCCACTTGTATGTGAAGAGTGATGTGTGGGGGTTTGGTGTTGTTCATCTTGAAATGCCTGACAGGCGTGAGGAGACTTTACCACACTCCACTGTTTGCATATCTTCATTTCTTGATCAACATCCAAAGTTGCTTGAGCCTTTGGGAACATCATATGATTATTTCTGCAGTAACTTTATGACGCATATTGGTTTTCCTATCAATGAGGTCAATCTATTCTTAGTGCACCTTGGTATGTGA


Promoter Sequence:
>Vu_05756::LG1:85847427-85849427(+)
TGATTGCTTTGAAAAAAAAAATTGTTAGGGAAATGATCAAATCAGAAGAACCAACAAATTGTTGGACTTGAGGAGAGAGGTTGTTTTATGATGTAGTTAATGAAGTACCATTTTACTCTTGGTCCATCATGATGTTTGTCCTAGCTTCCTAAGTGATTCTTTCTTTCTTTCATAAGGGCTTGGATCCTCCAAACTTGGGTATATGGTTCATATGCATTAACTCCTTAGGTTAGGAGTTCTACCTTTTGCCACTGTCTGTCTACCACAACCAAATTTTCAGCCTCTTTTGGACTCTTGGACTAAAATAAGAAAAATAAATTTCACCTGTTTGATAATCATCGACAATTAAATATATCGGTGGAATAGATTCTGTGTTGTTGCTATCATTTTTGGTATAAGCAATTTCCGTTATTTCGTAACTAGTATTGTGTCTCTGAGGAAGAAAGAGAAACTAATTGTTTTTCTGATTTTTGTTTTTGACAAATATAACAGGTACTACTGCATCTTGGTGCCATTGACTCTCCCTATAATTGTTGTTGCTGTGTACTTTCATTGGCTCAGCATGAAGTTGTTCAAGCATGCTTAGCATAACCTTCTCAGATTTTGAAGGCAGAAATAAATGTCTTTCTACTGAAAGGGACCGAGGGAAACTCTTGCTGCTATCGCTCGGGAACACTCCTCCTTCACCGATCGGTCCTTTTTGCTTTCGCCTAACTTCCTGGCTCTTCCTCTCTCAATGTCAAAGTGGGGTGACCTGCAAAAAACACTCCGACGCTCAATTCAGAATTTATCTTCGCAAGTTTAGTGAAAATTAGTCAAATAAGAGAGTTTACCTTCTCAATCGATTGTTATTTATATGGTTTCAGAGAATATTATCTATTAATTTACCTCATAATGACGATCAATGCTCACCTTAATTGCTCGACAACGGTCGTTACCTCATTAATTATGCTCATTAATTATGCATTCATTGACATTCAAAAGGTTGTCTCCAGCCAACGGCTGAAGAGTTCGCGAGTGCAACCCTGGCGTCCGACCGGGAATTATCAGCTTCCATAACTCTTACATACCCGATCGATTTTATTCATACTCCAATCGCCCTTGGACGATCGGTCTAACCTACTCAATAGCGACTAAGCATATCCGGTCGATCGATTCTACTCGGTAGTAACAAAATGTATGCTGTTGGAGCAACAATCACCTATATCAATTGCTGCCTTGTTAGATTCTGTGGAACTTGCACTCCTCTCATCACCTAAAAAGAGCATAATGATTAAGATGTTAAATGTGATTATGTGTGAGTTAACATGCGGAATCGTTCCTATTTAATCAAAGGCCTCGGTTTTAAATCCTGAATATTGTGCTAAATATTTGCCCAAGTTCTATTTTCCAGAGCGATCTTAAAAGTTGAATGCACAGTACAAATGCATTTAAACATTGAATATGTAAACATATATATAAAGGGTGCTTATGTATTGTCTACTACAAAACAAGTTTACGTGCCAGTTAACTAGGTTCATGGGTGTGGGAACATAAACTTATTTACGCGTTGACTTGTGATTATTGATTATTTCCACGTATATTCTTTTTAAATTATATTTTCGTTTTTGATATTATTGATAGGAAAATTTGATCATTTTAAAGAATATTTTAAATCCTAGATTTTTCTCTTTCTTCGTTGCTGCAACCAACTTATAGGAGTCCCAACTCATAGTTCCATTCGCTTTTAGAGTAGTGATACTTAAATCATCAATTAAATATGATGTCATTTGTTGTTCGGGAAGTTATTTTAATATGCAGTTGCATTTAGGCAACCAATTTATTTGATGCCTGAATTATGCCATTTATGTTTATATATATAAAATAAAATTTTGACTCTGTTTTTAATGCTCTCACGTGCCTCCTTAGATACTGCTATGAATTAGGAGTGAAGTATGTAACTGTCTATGCATTCAGCATTGATAACTTTAAAAGGAAGTCTACAGAAGTTCAATCCTTGA


Gene Sequence:
>Vu_05756(+)
ATGGAACTGATGCGGATAAAGATAGAGGAGTTGCTTGAACAAGAAAGTCTCATTAATGAGTATGGTGTTAGATTACATTTCATTGGAGACACGAAACTACTGACAGAGCCTGTCAGGGCTACTGTGGAAAAGGCAACGAGAGTTACTGCCCACAACAACCAGAGAGTTCTTTTGATTTGTGTAGCGTATACTTCTCGTCACGAGATTGTGCATGCTGTTCAAGAATGTTGCAAGGAAAAATTGAATGAAGTTCAAGCGTTAAAAGAAGAGAAAGTTGCAAATGGTGCGTTTTCAAGAATTGATCAGGGCCTGAAAGGAAATGATTTTGATTTGCTTTCTCAAGATTCATGTAAAGAATATCGAAATGCAATCAAATCTTATAGGACCGAAGTAGAAAGTGTTGCAAGGAATGATGGTTTATTTGAGAATAATATCGAGAATCATATCGGTAACGACACTGAAGCTGAAACGACATTATACAATGGGCTGGTTGAATTGACTGAAGAGAGAAAGGATATACAAGATGAGTTTCCTTTTATAAAACTGGCGGATATTGAGAAGAACATGTACATGGCAGTTGCACCTGACCCAGACATCTTGATCCGATCTTCTGGAGAAGCTCGCCTCAGTAATTTTCTACTTTGGCAGACTACTACATGTCCTTTGTATGCTCCGACTACACTCTGGCCTGAAATTGGTCTAAGGCACTTTATCTGGGCAGTATTGAACTTTCATAGACACTATTTTTATTTGGAAAAGAAAAAGAAACAGTTTTAAGTGTATTCTTGTTGGCCAAAATTCAGAATATGTCGCAACAGGTCAATAATATCTGCAGCCATTTGGCAATTGGAGCGGCTTTAACTGTATGTTTTTTTTACTGTATTAATGAGTGATAGGCGTAATATGAGATGAGATTATTTACATGCAATGCTATGTAATAAGGAAATGGAAGCAATATATGGCAAATAATGAACAATGCCGAATTAATTTCGGAATTCTTTCTTTTTTATCTCCGACTTAAACTTATAATTACTAAAATATCACTAGATTTGTTGTTTCAGAGATTTATACAGAAAATAAAAAAGAAAGGACTTGTGTCGTCTTCACTGTTCCTGTAGTGAAAAATAAGGGGCGTACTAACTTTCTTTTGTAATTTTGAATAAAACAAAAAATTATAACAAAGTCTACTTAAACAATCAATGCTCTATGGAAGATGAAGTTCGGGTAGGGAGTCTAGAAATAAAAATCTAGTGTATAATGCTTGTACATTTGCCTGTGAACTGTATAAATATTTGAACAGGCCACTTGTATGTGAAGAGTGATGTGTGGGGGTTTGGTGTTGTTCATCTTGAAATGCCTGACAGGCGTGAGGGTACTTGACATGTTGATTGGACCAAGCCTTGTTTCTCTTCCAAAGGAAAGTTGAAACCATAATGGATGGTAAGATAGAGGGTCAATATTCGCTAAAGAAAGCAATACAAGCAGCACAACTTACTCTAAAATGCTAGTACATTACCCTAAACAATGTACTGCAATTTAATTTAATGCCACTAGATTTTTAATGTTATTATAATTTGTTTGAAAAGGGGTTATCCCTTTTTGTGATGATATTAATTAAGTTGTGTTATTTTGTAGAGACTTTACCACACTCCACTGTTTGCATATCTTCATTTCTTGATCAACATCCAAAGTTGCTTGAGCCTTTGGGAACATCATATGATTATTTCTGCAGTAACTTTATGACGCATATTGGTTTTCCTATCAATGAGGTCAATCTATTCTTAGTGCACCTTGGTATGTGA