Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_05571 LG1 83494858 83496129 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   secondary metabolic process
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
A/G 83495064 missense_variant p.Leu317Pro
C/T 83495428 missense_variant p.Val196Ile
C/T 83495493 missense_variant p.Arg174Lys
G/C 83495531 missense_variant p.Asn161Lys
G/T 83495666 missense_variant p.Phe116Leu
A/C 83495851 upstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_05571.1
MGRSPSSNESNVKKGPWTPEEDEKLMDYISKHGRGTWRTLPKHAGLNRNGKSCRLRWENYLRPDIKRGKLTEEEEQLIINLHSVLGNKWSKIATSLPGRTDNEIKNYWNTTIRKKLLHMGIDPETHRPRTDFNHLMNLSQLLGMSNLGTSMSPWTNPTGLQPDVTQLAKLQVLQNMLQLMNNSSFISMTNPYLVDSQILNPPTFDTFLHGTNTLQVRDPMFRGPEYPNPTANNISDPFSQTPSDYSQQNIFKSGIEKENETNHQEVRSYTKNINTSQQNQAENLLPPLVASCPRTTTFNKMESNYNEAQKSTESPFSTTFEAWEKFLIEDDEASGSYWKEILDLTSTSASPVS*


CDS Sequence:
>Vu_05571.1
ATGGGTAGGTCACCTAGCAGTAACGAGAGTAATGTTAAGAAAGGGCCATGGACACCGGAAGAAGATGAAAAGCTAATGGATTATATTAGCAAACATGGAAGAGGAACATGGAGAACACTTCCAAAGCATGCTGGTCTAAATAGGAACGGAAAAAGCTGCAGGTTGAGGTGGGAAAATTATCTAAGACCAGATATTAAGAGAGGAAAATTAACTGAAGAGGAGGAGCAATTGATCATCAACCTTCATTCAGTTCTTGGAAACAAGTGGTCAAAGATTGCTACAAGTCTTCCAGGGAGAACTGATAACGAGATCAAGAATTACTGGAACACCACCATAAGAAAAAAGCTTCTCCACATGGGTATTGATCCTGAAACTCACAGGCCAAGAACTGACTTCAATCATCTGATGAATCTTTCCCAGTTGCTTGGCATGTCAAATTTGGGCACATCAATGAGTCCTTGGACCAACCCTACCGGTTTACAACCAGATGTCACTCAATTAGCCAAACTACAAGTGCTACAGAATATGTTACAACTTATGAACAATTCTTCATTCATTAGCATGACTAATCCTTACCTCGTAGACAGTCAAATTCTCAACCCACCGACATTTGATACATTCCTCCATGGAACAAACACCCTCCAAGTGAGAGATCCAATGTTCAGAGGTCCAGAATATCCAAACCCTACTGCTAACAACATATCCGATCCATTCTCTCAAACACCCAGTGACTATTCTCAGCAGAACATCTTCAAATCAGGGATAGAAAAAGAAAATGAAACTAATCATCAAGAAGTTCGTAGTTATACCAAAAACATTAACACTTCACAACAAAATCAAGCAGAAAATTTACTTCCACCGTTAGTTGCTTCGTGTCCTAGGACAACTACCTTCAACAAAATGGAGAGCAACTATAACGAAGCACAAAAGTCCACAGAGTCACCTTTCTCTACGACTTTTGAGGCTTGGGAGAAGTTTCTCATTGAAGATGATGAAGCAAGCGGTTCCTACTGGAAAGAGATTCTAGACTTGACATCCACTTCTGCATCTCCAGTTTCCTGA


Promoter Sequence:
>Vu_05571::LG1:83496129-83498129(-)
TAAATACTTATGACGAAAGAATTTAAAGAAGACATGATGAAGACATTTGAAATGACCGATCTTGGCTTCATAAACTATTTCTTCGGTATAAAGGTGAAACAACAAAAAGAGTGTATATTTATCTCTCAAAAGAAACATATTGAAGCTCTACTCCATTGGTAAACGAGAAGTTTAATATGAATGATTGCAAACATGTCACTACTCCATTAGTGGTAAACGAGAAGCTACAAAAAAAGATGATGGAGCACAAGAGGCAGATGCATCACATTACAGGAGTTTGATTGGAAGTCTCTGTATCTCATAGCCACACTACCAGACATTATGTATGCTACAAAGATTCATGCAAAAGTCAAGTCAAATTCATTATGGAGTAGGAAAAAGAACTTTAAGATATCTACAAGGCATAAAGGAGTTTGGTCTATGGTACAAAACCATGACTAACTCATGGATGATTGGCTACACAAATAGTGATTGGGTAGGATCAATGGACAACATGAAGAGTATGTTCAGATACGCTTTCTTACTAGGATCAAGTATTTTATCTTGGGTATCAAAGAAGCAAGCAACCTTGATATAATCAACAACTGAAGCAAAGTATGTAACAGTTATTGAAACCACAAGTCAAGCAAAATGACTACGAAGAATACTTGAAGAAATGGGTAACAACAAGATAGACTGACTATTAGCTATTGGAACAACAAATCGACAATAACAATATATAGCAAAAAAATGCAGTCCATCATCAAAGAACAAAACACATAGCCATTAAATATCACTTCATTCGAGATGAAGAGACAACTAAAAAAATTCAACTCAAGTAGTGTCCAATAGAAGATCAAATTGTAGATATTTTCATGAAGGCGTTACCACATCAAAATTTGAACTACTGCGCGCAATGCTTGGAGTTACCGAATTTGGATCAAGGAGGAGTATTAAAGTGCAACGCAAATTCTAGAAGAATATAAAAACTCCTAAGATAGAAGTATTAAAATGTAATAAAAGTTCTATAATATTGTAAAAAAATCTAAGATAGAAAGAAAAAAATTAAGAACATTCTACATAGGTAAAAATCTAGAACATTCCACATAAGTTGTGGGTAACATATTCTAAAATAATTTATGACTTTATAAATACCCATGTACGATATCTTTTGATGCAAGACAACATCTATCACAACTAAGACAAGTACAACACTTCTTTCAACTACTACTTTCACATTCTACTATCTTCACATTTTTTTTACATTTCGTTATCTCTACATTTTTTCTACATTTCGTCATCTCTACATTTTTTCTACTCCATCAACTGTTCCTTCCACAGCCTCAAAATACTAACAACTTAATATAAAGTTAATAATGAATTTCAATTCTTATACTCGACCTCTTCAAACTCACCTTTGGGTCCTTTGACATAGGTAGCAACTTCAATTTGGAGGTTTTGTTTCATTTCTTAGAGCAATTTGAATGAATTTTAGGTGAAAAGGTGATAAATTTCATAATGAGGACACTGAGATGCAGTTGTGGCTGCTGAATAGAAATATATAAATATAGCTGACATTGCGAGAATTTCAAATGATGAGAACATGACAAAAGATTATCACACTCATGACGAAGTTAATAAGAAACTTGAGAATTACGCATGATAGGAATGAATGCCGAAACATCGAGGTTAGAAACAGAAAGGGTTAATGTTTTTTTTTTATTTTTCATATTGCTAGGCACTGATACAAGCAAAGTGAAATATGGAAATTCCCATGGTCTAAAGCTTTTAGTCTCTGATCACGTGTCACGTGATAAAATATTCTGATACTTTAATGTCAAGAGAATATTATCACTACAGAAATAAGGTAATGCATGACCTCATTTCGTGAATTGCATGCACCAAACACCATATATATAACAATACCTGGACATACCTATGCCTTGTCAAACTCTCCCAAAAACTTGTACCTGTTTGCTTCTACTTTTTTTGTCGTAGAACATTTGTTGTGTCCCTGCCTA


Gene Sequence:
>Vu_05571(-)
ATGGGTAGGTCACCTAGCAGTAACGAGAGTAATGTTAAGAAAGGGCCATGGACACCGGAAGAAGATGAAAAGCTAATGGATTATATTAGCAAACATGGAAGAGGAACATGGAGAACACTTCCAAAGCATGCTGGTCTAAATAGGAACGGAAAAAGCTGCAGGTTGAGGTGGGAAAATTATCTAAGACCAGATATTAAGAGAGGAAAATTAACTGAAGAGGAGGAGCAATTGATCATCAACCTTCATTCAGTTCTTGGAAACAAGTATGAATATGCCTTTTTCCTTTGTATTGTGAAGCATGATAAATTTGAGATAACTTCTTTTTTTGTTATGTAAATTAAGTTGAAACCCTAATTCATTTTTATGATCAATTTGTAGGTGGTCAAAGATTGCTACAAGTCTTCCAGGGAGAACTGATAACGAGATCAAGAATTACTGGAACACCACCATAAGAAAAAAGCTTCTCCACATGGGTATTGATCCTGAAACTCACAGGCCAAGAACTGACTTCAATCATCTGATGAATCTTTCCCAGTTGCTTGGCATGTCAAATTTGGGCACATCAATGAGTCCTTGGACCAACCCTACCGGTTTACAACCAGATGTCACTCAATTAGCCAAACTACAAGTGCTACAGAATATGTTACAACTTATGAACAATTCTTCATTCATTAGCATGACTAATCCTTACCTCGTAGACAGTCAAATTCTCAACCCACCGACATTTGATACATTCCTCCATGGAACAAACACCCTCCAAGTGAGAGATCCAATGTTCAGAGGTCCAGAATATCCAAACCCTACTGCTAACAACATATCCGATCCATTCTCTCAAACACCCAGTGACTATTCTCAGCAGAACATCTTCAAATCAGGGATAGAAAAAGAAAATGAAACTAATCATCAAGAAGTTCGTAGTTATACCAAAAACATTAACACTTCACAACAAAATCAAGCAGAAAATTTACTTCCACCGTTAGTTGCTTCGTGTCCTAGGACAACTACCTTCAACAAAATGGAGAGCAACTATAACGAAGCACAAAAGTCCACAGAGTCACCTTTCTCTACGACTTTTGAGGCTTGGGAGAAGTTTCTCATTGAAGATGATGAAGCAAGCGGTTCCTACTGGAAAGAGATTCTAGAGTAAGATTTCTTCTTAATTTGTTTATCTTGCTCAAATGGTTAAGTGCGTCGTTTTAGTTTATAACTTTACATAATTTCTTTTTTTTCTTTTGCAGCTTGACATCCACTTCTGCATCTCCAGTTTCCTGA