Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_05554 LG1 83245706 83248002 PREDICTED: transcription factor MYC2-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
T/C 83245763 3_prime_UTR_variant
A/G 83245777 3_prime_UTR_variant
A/G 83245779 3_prime_UTR_variant
A/T 83245800 3_prime_UTR_variant
T/C 83245805 3_prime_UTR_variant
C/T 83245882 3_prime_UTR_variant
T/C 83245954 3_prime_UTR_variant
G/A 83246510 synonymous_variant p.Leu479Leu
A/C 83246868 synonymous_variant p.Leu359Leu
G/A 83247007 missense_variant p.Thr313Ile
T/A 83247024 missense_variant p.Lys307Asn
G/A 83247296 missense_variant p.Leu217Phe
G/T 83247318 synonymous_variant p.Ala209Ala
C/T 83247324 synonymous_variant p.Glu207Glu
C/G 83247326 missense_variant p.Glu207Gln
C/G 83247330 synonymous_variant p.Ala205Ala
A/G 83247335 missense_variant p.Ser204Pro
C/T 83247345 synonymous_variant p.Arg200Arg
C/A 83247346 missense_variant p.Arg200Leu
G/T 83247348 missense_variant p.Asp199Glu
G/T 83247351 synonymous_variant p.Pro198Pro
G/A 83247357 synonymous_variant p.Thr196Thr
G/A 83247501 synonymous_variant p.Ser148Ser
T/A 83247812 missense_variant p.Thr45Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_05554.1
MTEYRSPPTMHLWTDDNSSVMEAFMSSSDFSSLWMPTPQSATSSTTPGADASRAPPPPPPSQSQSLLNQETLQQRLQTLIEGARESWTYAIFWQSSYDYSSGASLLGWGDGYYKGEEDKGKGKAPKETSSAEQDHRKKVLRELNSLISGPSASADDVDEEVSDTEWFFLVSMTQSFVNGSGLPGQAFFNSNPVWVTGPDRLSESACERARQAQVFGLQTLVCIPSANGVVELASTEVIFQNPDLMSKVRDLFNFSNPDAGSWQLNCVATDQGENDPSSLWLNPSSSIEIKDTSNAVAPASANAAVSKTMPFETPGSSTLTETPSAAAAAAHVPNPKNQGFFPRELNFSNSLKPESGEILSFGESKKSSYNGSYFPAVAAEETNKKRRSPVSRSSIDDGMLSFTSGVILPASNVKVGGSGGGVGGGDSENSDLEASVVKEADSRVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLSELESEKGELEKQLDSAKKELELSTKNPPPPSPPRGPSPSKKEAKETTSKLIDLEVEVKIIGWDAMIRIQCSKKNHPAARLMAALKDLDLDVHHASVSVVNDLMIQQATVNMGNRFYTQEQLLSALSSKIGHAL*


CDS Sequence:
>Vu_05554.1
ATGACAGAGTACCGGTCGCCGCCGACGATGCATCTCTGGACCGACGACAACTCTTCCGTCATGGAGGCCTTCATGAGCTCCTCCGACTTCTCATCCCTGTGGATGCCCACCCCTCAATCCGCTACCTCTAGCACCACTCCGGGAGCCGACGCTTCTAGAGCCCCGCCGCCACCACCGCCGTCCCAGTCTCAGTCCCTTCTTAACCAGGAGACCTTACAACAACGGCTGCAAACGCTGATCGAAGGTGCCAGAGAGAGCTGGACCTATGCCATTTTCTGGCAATCTTCTTATGACTACTCCTCCGGCGCTTCCCTTCTCGGTTGGGGCGACGGATACTACAAGGGCGAGGAGGACAAAGGAAAAGGAAAAGCCCCCAAGGAGACTTCGTCCGCGGAGCAGGACCACCGTAAGAAGGTTCTCCGCGAGCTCAATTCCTTGATTTCCGGCCCTTCCGCTTCCGCCGATGACGTCGACGAAGAGGTATCCGACACTGAGTGGTTCTTTCTAGTGTCCATGACTCAGTCCTTTGTCAACGGCAGCGGCCTCCCGGGCCAGGCTTTTTTTAATTCCAATCCCGTTTGGGTCACCGGGCCCGACCGGTTATCCGAATCGGCGTGCGAGCGGGCCCGCCAGGCGCAGGTTTTTGGGCTTCAGACTCTGGTCTGCATACCGTCCGCAAACGGCGTCGTTGAGCTGGCGTCTACGGAGGTGATTTTCCAGAACCCTGATCTCATGAGCAAAGTGCGGGATTTGTTCAACTTCAGCAACCCCGACGCGGGTTCCTGGCAGTTGAACTGCGTTGCCACCGATCAGGGCGAGAACGACCCTTCCTCACTCTGGCTCAACCCTTCTTCCTCTATCGAAATCAAGGACACCTCTAACGCCGTTGCACCCGCTTCAGCAAATGCAGCAGTGAGCAAAACGATGCCGTTCGAAACCCCTGGTTCCAGCACTCTAACAGAAACCCCTAGTGCCGCCGCCGCAGCAGCTCACGTGCCCAACCCCAAGAACCAGGGTTTCTTCCCGAGGGAATTAAACTTCTCCAACTCCTTAAAGCCCGAATCCGGTGAAATTCTTAGCTTCGGAGAGAGCAAGAAGAGCTCTTACAATGGGAGTTACTTTCCCGCTGTAGCAGCTGAGGAGACCAACAAGAAGAGAAGGTCTCCTGTTTCTCGCAGCAGCATTGACGATGGAATGCTGTCCTTCACCTCCGGCGTCATTCTACCGGCTTCGAATGTAAAAGTTGGTGGTAGTGGTGGTGGTGTCGGGGGCGGTGATTCCGAAAACTCGGATCTGGAGGCTTCCGTGGTGAAAGAGGCGGACAGCAGGGTGGTGGAACCGGAGAAAAGGCCCCGGAAGAGGGGTCGAAAGCCGGCGAACGGCAGAGAGGAGCCGCTGAATCACGTGGAAGCGGAGAGGCAGAGGAGGGAAAAGCTGAATCAAAGGTTCTACGCGCTTCGTGCGGTGGTTCCAAACGTGTCGAAGATGGACAAGGCGTCGCTGTTGGGCGATGCCATATCCTACATAAACGAGCTGAAGTCAAAGCTGAGTGAGCTTGAATCGGAGAAAGGGGAATTGGAGAAGCAATTGGATTCGGCGAAGAAGGAGCTTGAGCTGTCAACCAAAAACCCTCCTCCTCCTTCTCCTCCACGTGGACCATCTCCATCTAAAAAAGAAGCGAAGGAAACGACGAGCAAGCTGATTGATTTGGAAGTAGAGGTGAAGATCATAGGGTGGGACGCCATGATAAGGATCCAATGCAGCAAGAAGAACCACCCTGCGGCAAGGTTGATGGCAGCGTTGAAGGACCTGGACCTGGACGTGCATCACGCCAGCGTCTCCGTGGTCAATGATTTGATGATCCAACAGGCCACCGTCAACATGGGAAACCGGTTTTACACGCAGGAACAGCTCCTGTCGGCGCTATCCTCCAAAATTGGCCATGCACTATAG


Promoter Sequence:
>Vu_05554::LG1:83248002-83250002(-)
GCCACTAGTGAGAGAGAAAACAGAATGCGCATATGAAGGACAAGAACACAAAAATAATCGATGAAAACAAACGAAAATCATACCTAAAGTAGTTAATTAACATACATTTGTATCAAATGAAAGAAAGATTACATGTGATAGTCTTCAAACTTCGTTCAAGAAAAGTTTGAGCAAAGAAGAGAGTCTCGTGCGCTAAGATAAAGTGAATGAATTTTCAATCTCCTACTCAAACTTTTATTGAATTCACTAACCTTTTGACGTCTAACGCTGAGGCATTCGACGTTTTATATCCTTTTACGTCGAATTATAATTTTAAACGACGTTTAATAATTGCATTTATTTACAAAATTGTCACCGGTCATTTTTAACGTTGGGTATTGAGTGGTTAGACGTTAAACACATGACATTATACGCTATTTTTGCACTAGTGCGAGTTGTCAAGATTGAAAAATCGAAAGATTTTGAGGTCGAGAGGTCAAGGCCAAACAAGACGAACGGGTTGAGGCTGAACAAGGTCAAAGATGAATGAGGCTGAGAGATTAAGGACAAGCAAGACCGAGTTGTCAAGATTGAAATGTCGACAAAATTTGATGATAAGAGGTTGAGGTCGAACAAGGTTGACAGGTTGAGGCCGAATAGGGTCGAGAGGTTGACTTCTTCCATTACTATACTCCTCATCATGTTCCTTGTGGTTACAATGGGAGTAAAAGAAATTCTTGCTCGGCCCCATGGTGAGCGCTAAAATGTTTCGGTATGAACCAAATGAATGTTTTCCAATTCCTGGATAACTTGCCCTGTGTCACTCCTATCTGTTATCTATTTGGTCTCTCAAGTCTCTTATACTTCCAAAATTGCTTAGATGGTACCTTGGACTTTTATTTATAGTAGTTGTTATGAGCTTTTATCATTTTGTTGGTTTAATCACGATGTAATCATATCTTAATTAGCATTAATAGGTTGATTTATGGTTATCATTGACTAAATGTTAATCTGAATTTCATTTTATAATTAATCGCTCTTGTCCTTTGTCTGAGTGATCGACCATTCAACCAAAATGTGATCGTATTATTGATCAAAGATATCAGCTAAAAATACCAGTCTAAAATATATGTACCATTCGTAATTATCATTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATTACTTTTTTTTATTTTCATAAATTTACACGTGAAAATAATTTTATCGAATAATTGAAAACCAATACAAAGTGAAGTTAATTATGCAATAAAAAACCAAATTAGAAAGCGTCATAAAAAATAAATTCAAATTAAATTATTCTTTCTAAATATAATTAATTAATTATTTCTATTTAAATGTGAAAAATCTTTCAGCATACAGCTGGTAACATTCAAACAAACCAAGCAAATTTTCATAATCAAATAAATAAAAGAATAACGTAACTTCTTGATCATTATAGAAAAATAATTTTAATACTTTCAACAAGATTTATAGTAAAAAATAGTGAAGTTGTGATTATTAATTTTAAATAAATAAATTTAGGCACGGGTCATTAATATTAAAAAATTATTCACCAAATCAATAATATCAAAGACGTAAATAGTTTAACCAAAATTAAGATATAAGCTTATTTATTTAATTAGAAAATAGAAATAAATATTTGGGAAATTAAACTAGAAAGGCTATGAATACTACTCTACTCTTGTATGTAGTGGAGAAGTTACTATTTTTATGCAACAACATAAAAGAGCATTCTCCAAGCGAGAAACAGTATCAGAAAGGAAAGTTAACATCGGAGTAAGGTGATTACTATTGTACTTCAGCTTGAGTAGAAGAGTTTGTTAAAAATGTCTAGCAATCTATTTTATTGCCCAATTGCACATGCGCTTTCTTCCCCAAACCTAAAATGAAACCCAAATGCACTCCACATAAATACCAAATCCAAATCCAAATCCAACTAACTCATTACCCTTATCTTTCTCACACATACC


Gene Sequence:
>Vu_05554(-)
ACTTCTAGACACACTAAAAATACACTTCACTCTCTCATCCAAACCACCCGTGAATGGAATGACAGAGTACCGGTCGCCGCCGACGATGCATCTCTGGACCGACGACAACTCTTCCGTCATGGAGGCCTTCATGAGCTCCTCCGACTTCTCATCCCTGTGGATGCCCACCCCTCAATCCGCTACCTCTAGCACCACTCCGGGAGCCGACGCTTCTAGAGCCCCGCCGCCACCACCGCCGTCCCAGTCTCAGTCCCTTCTTAACCAGGAGACCTTACAACAACGGCTGCAAACGCTGATCGAAGGTGCCAGAGAGAGCTGGACCTATGCCATTTTCTGGCAATCTTCTTATGACTACTCCTCCGGCGCTTCCCTTCTCGGTTGGGGCGACGGATACTACAAGGGCGAGGAGGACAAAGGAAAAGGAAAAGCCCCCAAGGAGACTTCGTCCGCGGAGCAGGACCACCGTAAGAAGGTTCTCCGCGAGCTCAATTCCTTGATTTCCGGCCCTTCCGCTTCCGCCGATGACGTCGACGAAGAGGTATCCGACACTGAGTGGTTCTTTCTAGTGTCCATGACTCAGTCCTTTGTCAACGGCAGCGGCCTCCCGGGCCAGGCTTTTTTTAATTCCAATCCCGTTTGGGTCACCGGGCCCGACCGGTTATCCGAATCGGCGTGCGAGCGGGCCCGCCAGGCGCAGGTTTTTGGGCTTCAGACTCTGGTCTGCATACCGTCCGCAAACGGCGTCGTTGAGCTGGCGTCTACGGAGGTGATTTTCCAGAACCCTGATCTCATGAGCAAAGTGCGGGATTTGTTCAACTTCAGCAACCCCGACGCGGGTTCCTGGCAGTTGAACTGCGTTGCCACCGATCAGGGCGAGAACGACCCTTCCTCACTCTGGCTCAACCCTTCTTCCTCTATCGAAATCAAGGACACCTCTAACGCCGTTGCACCCGCTTCAGCAAATGCAGCAGTGAGCAAAACGATGCCGTTCGAAACCCCTGGTTCCAGCACTCTAACAGAAACCCCTAGTGCCGCCGCCGCAGCAGCTCACGTGCCCAACCCCAAGAACCAGGGTTTCTTCCCGAGGGAATTAAACTTCTCCAACTCCTTAAAGCCCGAATCCGGTGAAATTCTTAGCTTCGGAGAGAGCAAGAAGAGCTCTTACAATGGGAGTTACTTTCCCGCTGTAGCAGCTGAGGAGACCAACAAGAAGAGAAGGTCTCCTGTTTCTCGCAGCAGCATTGACGATGGAATGCTGTCCTTCACCTCCGGCGTCATTCTACCGGCTTCGAATGTAAAAGTTGGTGGTAGTGGTGGTGGTGTCGGGGGCGGTGATTCCGAAAACTCGGATCTGGAGGCTTCCGTGGTGAAAGAGGCGGACAGCAGGGTGGTGGAACCGGAGAAAAGGCCCCGGAAGAGGGGTCGAAAGCCGGCGAACGGCAGAGAGGAGCCGCTGAATCACGTGGAAGCGGAGAGGCAGAGGAGGGAAAAGCTGAATCAAAGGTTCTACGCGCTTCGTGCGGTGGTTCCAAACGTGTCGAAGATGGACAAGGCGTCGCTGTTGGGCGATGCCATATCCTACATAAACGAGCTGAAGTCAAAGCTGAGTGAGCTTGAATCGGAGAAAGGGGAATTGGAGAAGCAATTGGATTCGGCGAAGAAGGAGCTTGAGCTGTCAACCAAAAACCCTCCTCCTCCTTCTCCTCCACGTGGACCATCTCCATCTAAAAAAGAAGCGAAGGAAACGACGAGCAAGCTGATTGATTTGGAAGTAGAGGTGAAGATCATAGGGTGGGACGCCATGATAAGGATCCAATGCAGCAAGAAGAACCACCCTGCGGCAAGGTTGATGGCAGCGTTGAAGGACCTGGACCTGGACGTGCATCACGCCAGCGTCTCCGTGGTCAATGATTTGATGATCCAACAGGCCACCGTCAACATGGGAAACCGGTTTTACACGCAGGAACAGCTCCTGTCGGCGCTATCCTCCAAAATTGGCCATGCACTATAGTCTGCACTACCACTTCTAGCTGTAGCTGTAGCTATCCATGTAAAATACTGTTCTTTTTTTTTTGGTAGCATAGACTAAATTAAATTCTTGAGGCAATTGGATTTGGGAAGCGGAACGGACCCTGGAACAGTTTTTCTTCAAATCTATAGCAGCTCTTATGAAGTAGAGATGAACTAGTTTTGTGTTAATATTATCTGTTTATTTGGATTGTATATATGTTTATGAATTATCATAAATGTGAACCGAACTTGGTTAAATTTATGGGTATTTTTCCTAAATCCGTGAT