Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_05519	LG1	82753825	82754925	PREDICTED: dof zinc finger protein DOF5.7-like	Map

Annotations

category	relationship type	keyword
Biological Process	involved in	guard cell differentiation, regulation of cell wall pectin metabolic process, regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, stomatal movement, guard cell differentiation, regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, regulation of cell wall pectin metabolic process, regulation of transcription, DNA-templated, guard cell differentiation, positive regulation of transcription, DNA-templated, regulation of cell wall pectin metabolic process, positive regulation of transcription, DNA-templated, regulation of cell wall pectin metabolic process, regulation of transcription, DNA-templated, guard cell differentiation
Cellular Component	located in	nucleus, nucleus
Molecular Function	enables	DNA-binding transcription factor activity, sequence-specific DNA binding, DNA-binding transcription factor activity

No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_05519.1

MVPPEGMPPTPKDHELTEGRKTTRPPPEQGVKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTNGGALRNVPIGGGCRKNKKVKPSSSASSSSSSRLSCDPKDFNFHGLSVPPSVDFNLGGIPFPSRLTTFNTQHHLPTPPTGVFNQFSSFGDVPSSSTSSLSALSAFQLDPPAAVSNPLLGLVPPNPDLWALRRSERASLSDPLNSAMQTLQTMEAMNVHSNLASSIESLSNINQDLHLKLQQQRMATMMFGGDSQKGESSAALNGFGNQKLLQPVSFQNLAISKPENLPAGSSINGGPCGETVTAASTEWFFGNSFPSVSPSTSNGGANVNHISNDANNNNSWTGSLAWGDLQQQPYTALP*

CDS Sequence:
>Vu_05519.1

ATGGTACCACCAGAAGGCATGCCACCAACACCGAAAGACCATGAGCTCACTGAGGGCCGCAAAACGACGAGGCCGCCACCGGAACAAGGTGTGAAGTGCCCGAGATGTGACTCACCAAACACCAAGTTCTGCTACTACAACAACTACAGCCTCACACAGCCCAGGCACTTCTGCAAGACCTGCAGGAGGTACTGGACCAACGGGGGTGCCTTGCGCAACGTCCCGATAGGAGGGGGTTGCAGGAAGAACAAAAAGGTGAAACCTTCTTCCTCCGCTTCCTCTTCCTCCTCCTCCAGACTCTCCTGTGACCCTAAAGACTTCAATTTTCATGGTCTCTCAGTTCCTCCTTCCGTTGACTTCAACCTCGGAGGGATACCCTTTCCCTCCAGGCTCACTACTTTCAACACTCAACACCACCTCCCAACACCCCCCACTGGGGTGTTCAACCAGTTCTCTTCTTTTGGGGACGTTCCATCATCTTCCACCAGTTCTCTTTCTGCTTTGTCTGCCTTCCAGCTTGACCCCCCTGCTGCTGTTTCAAACCCTCTCTTGGGTCTCGTTCCGCCCAACCCTGACCTCTGGGCTCTACGTAGGTCAGAAAGGGCCTCACTCTCTGATCCATTGAACAGTGCAATGCAAACCCTTCAGACCATGGAAGCCATGAACGTTCACAGCAACCTTGCTTCTTCAATTGAGTCGCTGAGCAACATCAACCAGGACTTGCACCTGAAGCTGCAGCAGCAGCGCATGGCGACAATGATGTTCGGTGGGGACAGCCAGAAAGGTGAGAGCAGCGCTGCCCTGAATGGGTTTGGGAATCAGAAGCTGCTACAACCGGTTTCGTTTCAGAACCTTGCGATTTCGAAGCCAGAGAACTTGCCAGCTGGCAGTTCCATAAATGGTGGTCCATGTGGGGAGACAGTTACTGCAGCATCCACTGAATGGTTCTTTGGGAATTCCTTTCCCTCAGTGTCTCCTTCAACAAGCAATGGCGGTGCCAATGTTAACCACATTAGCAACGATGCAAACAACAACAACAGCTGGACTGGTTCCCTTGCCTGGGGAGATTTGCAGCAGCAACCATACACCGCTTTGCCCTAG

Promoter Sequence:
>Vu_05519::LG1:82754925-82756925(-)

TAATGAATAGAAAATTAAAAATAAACAGAAAATCTGAAACTTAAAAACATAAACTATTGGTTTTGAGACTATTTACCAAAGATTTAGCTTGATTCCTTAAATTTAACAGTTTATGCCTCAAATTTATTCCTATGTATGCTACAGGTTGAGTTGCTCAAGGTGCTTTTAAGTTTTAATTATAGATAATTAAGGTGGATAAATTAATTTTGAAAAGTATTTAAAGTGATTAAGAATGATATTTTTGGTCCACAAAAGTATATGTGGCTCAAAATTTGCCAATTATATTCAAACAAAAAGGTTCAAAATCAAGGTATAAGTAACTTAAATGAGAAAGTAAGGACACCTATGACGACCAAAAAGTTTGTTGTTAGACATATGTCTTGGAGTGAGATGAAAATGTTTTTTTCTTTTTCCTTTTTCTTTAATTGAGTCCTGAGAAAGAAAGCTGCAGTTACTAATTATACAACAAGATATGTTTAATAATTTGGAACTTGGAATCACTTATAATGTATTTGTTTTCTTTTAAAAAACGCATGTTTTGATTGTTTTTTACGTTATAATTCATAAAAAAACAGATGTAAAAACATGTTGTATTAGATTTAGTTACACATTAATTATAATTATTAAAAAGACAAAAGAAATTATGTTGTATTAGATTGGGTTATACAGACAGCTTTTTTTTACCTGCCATCTAAACACGCGTTTTTTTATTTCATTTTATTCCACTTTTGAATAGTTTAATTTTGATCTAAAGTTTTTTTACATTGAAAAGAAAAATCATATGACAAGTTCAAATTATATATTAGTCATTATGAAAATAAAAAATTACAATTCGTACCAACATATTTACACTAACATAGAAATGTATTCAGATCATAAGTGAATACACTATTTATCATTAGCCATAAAAGAATGTTGCCTTGAGAAATAGGACTTAATTTCTTTGACGTATAAAAATGATTAAAAGGAATAGTTTTTTCCAAGTATTTATTAAATGGTAGCTCTGGAATAATTTTTTTTTCCAAGTATTTATTAAATTGTGTCGTTAATTGAAGTCTTTAATATGGTGATTAAAAGAATCAATAAATGTTATATTTTATTAAAGGATTACTTTGGAAATCACGATATAAGTGTATTGTTATAATCTCAATTAGTAAAATTATTTTTTCTTACATCCTAATTAATGTTGTGGCTCTTAAAACAGGTGCTAACACATGTTGATTAAGCTTATGAGGTTGTGGTTTTACTTGTGACTTGAATGTTTAGTTGACCACAATTATTAGTGTTTGTTAAGTGATAGTTTTACAGCAAATTTTCCCATTAAAAGAGCAGAAAAAGAGAAGGAGAGTAGTGAAAGAAAATGAGTGGTATGGAAAAGAAAGAAAAAAAGTGGTAATATAAAAACTGTGGGAGGAAGTAAGTATTATGTTGAGATTATTGAACAAATTCCAATATGATTAAAATGAAGAGCAGCTAAAATTGTGGCTAATTTTTGTTTATAGTAGAAGTGGTGGATCTAATTTTACACTGCCAAAACAGTTTGCATCATCTGCCTACGTTTCTCTCGTTTACTTTCTCTCTCTAAATCTTGTCTGTTTCTCTCTCCTCAATATACACGATATCCTCTTTCCAGTGAGATCTGTCTCCTCCCTTGCATATACATTTGTCTAAACCTATGCCTTTCTCCATTTCCTGATACCTTTAAAAGCCCACTTCACCCACCTCATTCACTCACATACCAATTCTCAATCACTCTCTTTGATGAGGATCACAAGCCCCCATCAACATTCAAGCCCCTCTTCTTCTTCCACCCTGCATGAAATCATTCAATTGAAACTCAAGCTCATCTAACCTTTCCCACCCCCCACAGCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTCTCTCTCTCTACATATATATATACATATATACCTGCATACCTATCCTTCTTTTTTCTCTCTCTTCCTTCA

Gene Sequence:

>Vu_05519(-)