Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_05418	LG1	81301291	81301671	hypothetical protein LR48	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect	Amino acid change
C/G	81301327	missense_variant	p.Leu13Val
C/T	81301368	synonymous_variant	p.Leu26Leu
T/A	81301448	missense_variant	p.Leu53His
T/A	81301462	missense_variant	p.Ser58Thr
T/C	81301522	missense_variant	p.Ser78Pro

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_05418.1

MVLVATPTPHPPLLLILLSTSWSPPLWGLSVDVAHLSFLSFSLADNKFAGPILPPLSSLSALRFLNLSNNGFNQTFPSELSRLQRLEVLDLYNNNSTVSLPLVVTQMLNLPLVSTKLFHRIEYIPL*

CDS Sequence:
>Vu_05418.1

ATGGTACTCGTGGCGACACCGACGCCCCACCCTCCACTTCTTCTTATTCTGCTCTCCACATCGTGGTCTCCACCTCTCTGGGGTCTCTCCGTCGACGTAGCTCACCTCTCATTCCTCAGTTTCTCCCTCGCTGATAATAAGTTCGCCGGCCCCATCCTTCCGCCTCTCTCCTCCCTCTCTGCCCTCCGCTTCCTCAACCTCTCCAACAATGGCTTTAACCAAACCTTTCCCTCGGAGCTATCGCGCCTCCAGAGACTCGAGGTCCTCGACCTCTACAATAACAACAGCACCGTCTCACTCCCTCTGGTCGTCACGCAGATGCTTAACCTCCCTCTGGTCAGTACAAAATTATTCCACAGAATCGAATACATACCACTCTAG

Promoter Sequence:
>Vu_05418::LG1:81299291-81301291(+)

AAGATTAAAATGTCTAAACGCACTCATGTTTTGAAGTTTAACAAAACAACATTAAATGAAATAATCATAAAATAGGTTATTAAGTAGAATATCGGAATAGGTGAAACATATGTGATAAGTTAAATAGTTTGAAAATCTAGTAACCTAGGAAAGTTGTAGAAAAACATTTGGGCTTAACCTAGATGCAACTCTAAACAATTACCTAAAGTTAAAAGCGTCAATGAGAGCCTTGCTAAATGCATAAGCTATACTCTATCAAACGGTGATTAGTCAAAACTCTCAAATAGATAAAAGTGTGGAGAAAATGTTTTTGGTAAGTCATTTGAAAGTCTTAATTAATATTACAAAAGCTTGTGAAAGACAACTCGCTAAGCCCATTAGCTGAAGGAAGCAGAATCTTAAAGCGTTTACAATGGACTAAATGATATCATTAGCTAAATCATTCACTTCGTCCAACAATGAAGTCTCATTAATGCTTGGCATCTTAGTAAAAGGGCTTAAATGAAAATATAAAAATCACTTTATTGTTCAGAACAAGCATTAAATGTTATTAAATGATCAACGTTCAAAAACAACAAAAATGATAAGAGAAAAGACATATTTATTGCATGCATATCTATTCTACTTTTTGCAAATAGCCTACTACATGCATCCACATATCCAATGCATATCAGAAGTGGACGTTAAAAACAAAGAAGACATTCACGAAATGTTCTCTCTATTAGAAGTTGTGTCAGAAAAATAGTACAACCTACTTCTATCAAAGTACTAAAAAAGCAAGTCTGCTATGACAAGTTAACTTTAACCAACGACTGCTTCACACGACAAGACTAAGAAGACACAATATTCAAGGCAAAAGCTCAATCTAACGAATATCTTTTGAGAAGTCTTCAAATAGAAGATGATTCAAAGAAAGAATCAAGAGAATAACTTACGAGAAGAATATCATACAAAGAGAAAAGAAATATCGCCGAGAGAAAAGCACATAACAACTCAAGAATAAAAAGAGAATATCTTAAAAGAAAAAGCTTAAGGCTTACTTCACTTGGGGGAGAGGATTTGAGGGAGAGTGAGTGGATGGATTTGAGGGGATTTGAGGATGAATTAGAGGTTATTTATTTGGATGGATTTGAAGGTAAATGGAAGTGGATTTGAAAGTAAAGTTTATAAGAATTAGTGTACAATTTGATTGATGTGACAGATAAAAAAAATTTGTTTAATTGGTAGAAATTGAAGATTACCAAAATGCCCCTAGTTATTAAAGTAATATAAAATGATAATTGTTAATGTTATATTTAATTGTAAAAATGTTTATAAGGAGAAAAAAAATAAAAAATAATTTTTAAAATGTATTGAAATAATTATTTTTAAAATATAAGAGTAATGATTCTTTGAGATACCTAAATTTTTTACATTCTTTTGACATTATTCTTTTTTATTTTTTACTTTCTTCTTTCTTAAAAAAATACAAAAATTTACATTTTTATGACCATTATATCCTTGTGCTTGTGTCAAATAAATGTAAAAGCTTATCATGATACCATTACTCATAAGCTAAATTATCAATTATTTAGTAAATGATAAATTAATTTTAAAACGTATTTTCATAGATTTATAAGAATTACACTCACAAATTAATATAAAAAAATAATGTTAAAATTACACTTATCTGGATCAGTGAGTAAAGGCATGATTTCTTGACTTTGAGAGCCACAGAGAATATTGGAATCAGATCGGAAAGGTAGAATTGTATCGTCTTGGATTACATCATTACATGCAAAATCATTTTGAAAAGGAAAAGAAAAATTCTCTTCTCAGTCTCCACTTACCTAAATTCCCTGCAACACCATTTGAAGTAGAAAAATTGAGAAAGATAGAGTGAAGAGAAAGAAATGGAGAAAATAAAGCAGTGAATGGTGAGTACCAATAGAATAAATATGCACGTGGCATCAATTGGGTCAGGCCCAGTGGTTTTGTTCCTCCACGGCTTCCCGGAACTA

Gene Sequence:

>Vu_05418(+)