Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_05410 LG1 81181525 81182513 receptor-like protein kinase FERONIA
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 81181548 missense_variant p.Val225Ile
G/A 81181562 missense_variant p.Ala220Val
T/C,* 81181582 synonymous_variant p.Gly213Gly
G/*,T 81181592 missense_variant p.Ala210Asp
C/*,T 81181593 missense_variant p.Ala210Thr
G/A,* 81181597 synonymous_variant p.Gly208Gly
A/G 81181603 synonymous_variant p.Asp206Asp
C/T 81181619 missense_variant p.Gly201Glu
C/T 81181640 missense_variant p.Gly194Asp
C/T 81181693 downstream_gene_variant
T/G 81181719 downstream_gene_variant
C/T 81181779 missense_variant p.Arg182His
G/C 81181801 missense_variant p.Arg175Gly
G/A 81181821 missense_variant p.Ala168Val
G/T 81182045 missense_variant p.Arg137Ser
G/T 81182180 missense_variant p.Leu92Ile
A/G 81182220 synonymous_variant p.Ser78Ser
G/A 81182290 missense_variant p.Ala55Val
T/A 81182292 missense_variant p.Lys54Asn
G/A 81182298 synonymous_variant p.Ser52Ser
A/T 81182300 missense_variant p.Ser52Thr
G/A 81182345 stop_gained p.Gln37*
C/G 81182354 missense_variant p.Val34Leu
G/A 81182401 missense_variant p.Ser18Leu
G/T 81182403 synonymous_variant p.Thr17Thr
C/G 81182425 missense_variant p.Arg10Thr
T/C 81182437 missense_variant p.Gln6Arg
C/T 81182443 splice_region_variant&intron_variant
A/C 81182465 downstream_gene_variant
G/C 81182505 missense_variant p.Asn3Lys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_05410.1
MHNRASKKKKESINLITPRRASWIKDAIINAIEVFKISSSTVSLTGQNPNPPPQKPKVPFSSNKKSSVFMKSREAILGVVAGVLLLSSILVFFLFKYKKNIALESGSSKKGGTSRGGGSSSLPTNLCRYFSIAEIRAATDNFNEQLMVGVGGFGNVYKGYVDEGSSILLISGKKYGLISCSCVRWSDEGGLGVDGEVEGVTGKGEADVGVAGEGEADVGVAEEGKVDVGVAM*


CDS Sequence:
>Vu_05410.1
ATGCACAACAGAGCTTCCAAAAAGAAGAAAGAATCAATTAATCTGATCACACCTCGCCGTGCAAGCTGGATCAAAGACGCAATTATTAACGCAATTGAAGTGTTCAAAATCAGCAGCTCAACAGTTAGTCTCACTGGACAAAACCCAAACCCTCCTCCTCAAAAGCCTAAGGTTCCCTTTAGCTCAAACAAGAAAAGTAGCGTCTTTATGAAAAGCCGAGAAGCCATACTAGGAGTAGTTGCAGGTGTCCTTTTGCTCTCTTCTATTCTTGTTTTCTTCCTCTTCAAATACAAAAAGAATATCGCCCTTGAAAGTGGTTCCAGCAAAAAAGGCGGAACTTCTCGCGGGGGTGGCTCATCGTCACTGCCAACCAACCTCTGTCGCTACTTCTCCATAGCAGAAATCAGAGCCGCCACCGATAACTTCAACGAACAATTGATGGTTGGAGTGGGAGGCTTCGGGAACGTGTACAAAGGCTACGTAGATGAGGGTTCTTCCATCTTGCTGATCAGTGGCAAGAAGTACGGTTTGATTTCCTGTTCTTGCGTTCGTTGGAGCGACGAGGGTGGTCTTGGCGTGGACGGCGAGGTCGAAGGCGTCACCGGAAAGGGAGAGGCGGATGTTGGCGTCGCTGGGGAGGGAGAGGCAGATGTCGGCGTCGCCGAGGAGGGAAAGGTTGATGTCGGTGTCGCGATGTAG


Promoter Sequence:
>Vu_05410::LG1:81182513-81184513(-)
AAAACCAAGTCTTCGAGCAAGTGTTTCGTGCAATGGAGAAGGGTTTAGCGTTTTCGATTTTGGAGAAGGGACGAGCTGTTGGTGGGAAATGAATTGCAGAGAGGGAATACGGTGATTTGGGGCAAAATTAATCGAAGAAATTACCGAAGGCTGTTAGGCCGTCGATACTTTAATTCCTCAACTCATTACCGAAGGCTTTAAGGCCGTCAATAAATTACCGTCGGTAATCAGCACTTTTCCTGTAGTGTCTGTTGTTATTTGCTCTATTGGGTAAAGAAGTAAGAGGTTAATTTAAGAGGTTGGAACGAATAGGAAACAAATTAGTGCACGTATGTTCTAACAGTGTGTGTGTGTGTGTATGCGCATGTCATCACAGTCAAGGAACAGGAAACGAATTAACATGTCCCAGACGAACAAGAAAAGGTCCCAATTATGCACGAGTCAATTGCAAGAAAATCATGATTTTGGTAGCTTAGATTTTGCTTCCCACTCATACCGAGTTATGAGTTATCATGCGAAGACTTAGTTAGGTTTGGTTTCAGAGACAGAGAGTTGAATTTTGATATGCAATGCAATGGAAATGCAGAATGTGTGGGTCACTATGTTCCCTTCCAATGGTGGAAAAAGACCTCAAAAGCTAACACTCAATACAACTTTCCTTTCACTTTTTATCCGACCAGATGTTAAACTTTTTACTTTCTAAAAGTATGATAAGTGGTTTACTTATTCTGTGGTTCCAAAAGAAAACAAAATTAAAAATAATAAAAATGAAAGCACAAGCTCAATTATTCAACTGAGGTGTTTGACACATATCATTATAAAAAATATAAATTGTTTCGGTATAGTAGTTGAGGCCGAGATACGAATCCAATGAGTCACGTCCTCTCCTTCCAATAATTCAGTTATCTTCACGTCTTCTTCCTATTTGGAACTCGTCAGGGAGAATGGAGTGGGTACCTGCGAAGGCACTCCGACGCTCAATTCAGAAAAGGGAAATCGTAGAACTCTTTCAGTTCAATAATAGAAGAAAAATATATTTCTATCCTTTCTTGATATTCAGAAAAACGTACCTTTTTTCCTTCTGGATTTTCATATTTAACCTAGCAGTAAGATAAAACCGTTTACCTGAAAATCCGGTTGGTTGGAGAACTTAACTGCTTGGAAAATACAACCGCTTGGTCGTACTTGATATTGGGTTAGCTGGTTCCACGATTTGTGACATCATGGCCACCTATTTCTAACCATTTTATTCTTTAATTTGTCAGGATTTAAAAGATTCATTTTGACCAAAATTGACCAAACACTTGTTGACTTTTACCTTTGACTGGGTTTAATCAACAGACGATCGCTACAAGACGATCTATGATATAACGATCGCTCTTTCTTGTGGTTAACCAAACATTTGTTGACCTTTACCTTTGACTGGGTTTAATCAATAAACGATCGCTACAAGATGATTTGGTGAATATAATATAACGATAGCTCTTTCTAACGGGTGGACGATCGTTCGGGAATAGTCATATGACAGCTCATTATCCTTGGTGATCGTTTGGGTTGCTAGTCGATCGATTCAAATATCCTCCCATACATAAATTAATTTTAAACACGAAAAATAACTATCATTATATTAACTAATTTATATATATCAATTTGTAACTTAAAGTTAGGCTTAATACCCTCTTTCGTCCCCACTTTCATTAGATAATGTCAATTCAGTCCTCATTTTTAAAAGTGTTTGGAATATGTCTATAGTTAGTAAAATTTGCGTCTAATTTGTCCCTTCCGTTAAGTATAATCAAACGGAGTTAGTGTGTTGATGATCTAGCACCATATATTGATGACGTGTCAATTTTGTGGGTGCTGACGTGTTACTTTCTTTCAGAATTGGGTCTTCTTCTTTTTGTTTGTCTTCTTCTTCTTTAATAATTCATTCCCTCATTTTCCCACCTCACATAACCAAGCTCTATGTATGTATAATCAACCTCAAAAACATCAAATTC


Gene Sequence:
>Vu_05410(-)
ATGCACAACAGAGGTTTCATTCTCATTCTCATCTTAAATCAAAAGATCTTATATCATCAAATCATCAACAGCTTCCAAAAAGAAGAAAGAATCAATTAATCTGATCACACCTCGCCGTGCAAGCTGGATCAAAGACGCAATTATTAACGCAATTGAAGTGTTCAAAATCAGCAGCTCAACAGTTAGTCTCACTGGACAAAACCCAAACCCTCCTCCTCAAAAGCCTAAGGTTCCCTTTAGCTCAAACAAGAAAAGTAGCGTCTTTATGAAAAGCCGAGAAGCCATACTAGGAGTAGTTGCAGGTGTCCTTTTGCTCTCTTCTATTCTTGTTTTCTTCCTCTTCAAATACAAAAAGAATATCGCCCTTGAAAGTGGTTCCAGCAAAAAAGGCGGAACTTCTCGCGGGGGTGGCTCATCGTCACTGCCAACCAACCTCTGTCGCTACTTCTCCATAGCAGAAATCAGAGCCGCCACCGATAACTTCAACGAACAATTGATGGTTGGAGTGGGAGGCTTCGGGAACGTGTACAAAGGCTACGTAGATGAGGGTTCAGTACCTGTTGCAATTCATTAGGGGTTCTCTTTTGATATTTGATTTTTTAGAGTTGGGATGCAGAGTTTCGTTTCGCTCTGTTTTTGGGAAAATTCTTGATTTTTCTGATTTCGATTTGGGTTGAGGTTCTTCCATCTTGCTGATCAGTGGCAAGAAGTACGGTTTGATTTCCTGTTCTTGCGTTCGTGTTTGCGGAGTTGCAGATTGTTATCTGAAGTGTTTCTATGCACGTTTTAGGGTTATTTGTTTTGCGATGTCTGATCTGTAGTGACGATGCTGGTTGGACCAGTGGAGCGACGAGGGTGGTCTTGGCGTGGACGGCGAGGTCGAAGGCGTCACCGGAAAGGGAGAGGCGGATGTTGGCGTCGCTGGGGAGGGAGAGGCAGATGTCGGCGTCGCCGAGGAGGGAAAGGTTGATGTCGGTGTCGCGATGTAG