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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_05334 LG1 80037338 80038886 PREDICTED: uncharacterized protein At4g06744-like
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Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 80038250 synonymous_variant p.Leu209Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_05334.1
MGTTTKTIFSSFLLCSLLLHLYFSEGVVAQEVVAKSESEALGEAEKRETLEIIIGGGGSPAPSPSPEAPCPPPPPKLNRLDRARRALLNFKNLIDDPNCYTQNWNDQTDTCDFRGIRCATYPKDKQTAVAGVDLNGARVTGQNGCALPLSSLLGENQIPELTFFHVNSNGFAGSVPSDVINFPYFFELDLSNNKVKGQFPLDAIKSNQLVFLDLRFNELTGPIPFQLFQKDLDVIFINNNHFTQYLPQNFGSTPARYLTFANNNLTGPIPKSVGYAPNLTEVLFLGNHFDGCLPIEIGNLKKAIVFDVSKNSLTGPIPLSFGCLKSIQYLNLANNKFYGCVPDNLCQIPSLRNNGNLSLANNYFNELGPSCWSLIKSKVLDVSNNCIHGLPNQRSPTECYYFYKTKKTCPNPSSFYTVPCKSHWGKPSSETNVPTSAPVTYKALKPHRLRL*


CDS Sequence:
>Vu_05334.1
ATGGGAACAACAACCAAAACCATTTTCTCCTCCTTTTTACTCTGCTCACTCCTGCTTCACCTTTACTTTTCAGAAGGAGTAGTAGCACAAGAGGTGGTGGCAAAATCAGAGAGCGAAGCATTAGGGGAAGCAGAGAAAAGAGAAACACTAGAAATTATAATAGGTGGTGGAGGTTCCCCTGCTCCTTCCCCTTCCCCTGAAGCTCCATGTCCCCCTCCCCCACCCAAACTTAACCGTTTAGACAGAGCGCGTCGTGCGCTTCTCAACTTCAAAAACCTCATCGATGACCCAAACTGTTACACGCAAAATTGGAACGACCAAACTGATACGTGTGACTTCAGAGGGATACGATGCGCCACATATCCAAAGGACAAACAGACAGCAGTTGCAGGAGTGGACTTAAACGGAGCAAGAGTGACGGGTCAAAACGGGTGCGCTTTGCCCCTCTCATCTCTCTTGGGCGAGAACCAAATACCCGAGCTCACATTCTTCCACGTAAATTCCAACGGCTTCGCCGGCTCTGTCCCCAGCGATGTCATCAATTTCCCTTACTTCTTCGAGCTCGACCTCAGTAACAACAAAGTCAAAGGCCAGTTTCCCCTCGACGCCATTAAGTCAAACCAACTGGTTTTCCTCGACCTCCGCTTCAACGAACTCACCGGCCCGATTCCCTTCCAACTCTTCCAGAAGGATCTCGACGTCATCTTCATCAACAACAACCATTTCACACAGTACCTCCCCCAGAATTTCGGCTCCACGCCGGCCCGCTACCTCACTTTCGCCAACAACAACCTCACCGGCCCGATTCCCAAGAGCGTCGGTTACGCACCCAACCTCACCGAAGTTCTCTTCCTCGGGAACCATTTCGACGGCTGCTTGCCCATTGAAATCGGAAACCTTAAAAAAGCTATCGTCTTTGATGTGAGTAAGAATTCTCTAACCGGCCCAATCCCTCTCTCTTTCGGGTGCTTGAAGAGCATTCAGTATCTGAATTTGGCGAACAACAAATTCTACGGCTGTGTTCCCGACAACCTTTGTCAAATTCCTTCTCTCCGCAACAATGGGAATCTCTCCTTGGCCAACAATTACTTCAACGAGCTTGGCCCCTCCTGCTGGAGTTTGATCAAGTCCAAGGTTTTGGATGTCTCAAATAATTGCATCCATGGGCTGCCAAACCAAAGATCACCCACCGAATGCTATTACTTTTACAAGACGAAGAAGACGTGTCCGAATCCGAGTTCTTTCTATACAGTGCCGTGTAAATCGCACTGGGGAAAACCCAGTTCCGAAACCAATGTTCCAACCTCTGCACCGGTGACTTACAAAGCTCTTAAACCGCATCGTTTGAGATTATGA


Promoter Sequence:
>Vu_05334::LG1:80038886-80040886(-)
ATCATTAGGGAAATCATCATATTTTTTCATCTAAATGACACTCAATATTAGTTAGCCTATTATCTAAATAAAAAATGAGGTCACAAGTTATGGTGCAATGCTGCTAGACAACTCAGCAAATTGTTAATGTTATTACATTCTAATGATTAAATTCACGCATTTCTAAAATCAGTGATTAGATTGTGTCAAAGTTTTAGAAAGATACCAAGTCTCAATTTTTAGTGAAACTTAAGAAACTAAAAACATATTTAACCATTATTTATATTAACATAAATATAACAATTATTTCCTTAAATTTATATATTTACACTATTTTAAAAATATTATTTATTTTTAGGTAACTATTACAATCCTATATTAAAGTGTTAAACTAATATCTTCACGAATTTATTTTTCACCAAAAAAAAAATGGATACACATATTTTGTTTTACCATTTACTCAATCATCGAAACGTCTCGTGCAAAATGTCTTTCCCACCGTTCTTCTCCTTGACCTCAAGAACTTAAAAGAACTTCAAGACATCTAGGAGCTACAAGAAAGTCCTTAAGCGAGTACAACACATTAGAGGTTGAAGGCACGAAATGAAAGCATCCAATGTCCCTAATGGTTAAAATGTGACATTTTTTAGATATTGATATCTATTAAAATATTACTACTATTCAGGTGGGATTAACACTTTTAATTAACACAAAAATGACAGACAATGAATGTCAAAGTTAGACAATCACAAAGATAATTATGTATAAATAACATTTACATTAATATAGAGCATAACAATCAACATTGTCACTATGAAAATGACACGACACGTTTACAATTATAAGCTCTATGAAATGATGAATTTTTACTAAAATGTTTGTCTTATAGTCGTACAAATGACGGTGATAGTGTTGATGAACTTAATACAATTTTACTTACACAACTAAATTTAATAAATATAATTCAAAATACTTACTACACTTTCAACACTTATCTAATATTATTTAGTATTCACCATATGCAAACATGCCTAACTTAAATAAACAAAATGATGTACAGAGAAAATGCATAAAAAAAACTCTAATAACTAATATGATAAACAATATGATGTACTGAGAAAATGCATAAAAAAACTCTAATAACTGATATGACGCAAAGAGAGAAGTGAGAGTAATGATATATGAATAACACTAAAAGAAAATTCTTAAACAAAAACCAATTTTAGATAAAAAAAATATTAATCACAATAATAATTAATTTATGAATATAAAATTATAATTAATTTATAAATTAAACTTTAAATTAATTTCTAACCTTAATTATCAAAGAATTAATGAATAAATTATTTTTTAATTTTAATTAAAGACTAATTTAAAATCTAATTATCTAATAACATTTAACATAGCATTTAGCTATCCGTTGATGTAATGGTATGGGTTCATTGCATAATTGAGATTTAATATATTTTGGTTGACCCTTTTTACTACCCAATAATACTTGTGTTGTTTCCTGGTTTTTGTAACTAAAGTTTTTTAAATAATTCAAATCCATACTTGGTAATAAGGTAAACTATATGTAAATATGTATATAAAATGACTAACCAACATGGCCAATATGTAATGAGAATACGATAGCAAAGGCATTTCTTAAAAAAAAAAAGTATTTAAAAACAAACCAAGAATTCAATAGTTTTTAGCAAATACACATTTAAACTCATATAAACAGCATAAATTATAAAGAAATACTTCCAAAGAAAAATTTAGTGTATGGTGGTTGTCTTGTTCTTCTTTTTGTTTTGGTAGTATTTGGCTAAAAAAAGGTAGAGAACATGTCAAGTGGACGACTCAGCAGAATAGAACAAATCATTGTCCTTCATAGATAAAGAAAGCCTAACAGCTTCTCACGAGAGTGCAGAATATCTTGGCCTCCATGGAATTCAAGCCTATTGACTTTTCTCCGGCTTAGCAATATCTTGAGCAAGACAGTATATAAGGAGTTGGAAAACCATCCTTTCTTCCTC


Gene Sequence:
>Vu_05334(-)
AATCACCAAGATGGGAACAACAACCAAAACCATTTTCTCCTCCTTTTTACTCTGCTCACTCCTGCTTCACCTTTACTTTTCAGAAGGAGTAGTAGCACAAGAGGTGGTGGCAAAATCAGAGAGCGAAGCATTAGGGGAAGCAGAGAAAAGAGAAACACTAGAAATTATAATAGGTGGTGGAGGTTCCCCTGCTCCTTCCCCTTCCCCTGAAGCTCCATGTCCCCCTCCCCCACCCAAACTTAACCGTTTAGACAGAGCGCGTCGTGCGCTTCTCAACTTCAAAAACCTCATCGATGACCCAAACTGTTACACGCAAAATTGGAACGACCAAACTGATACGTGTGACTTCAGAGGGATACGATGCGCCACATATCCAAAGGACAAACAGACAGCAGTTGCAGGAGTGGACTTAAACGGAGCAAGAGTGACGGGTCAAAACGGGTGCGCTTTGCCCCTCTCATCTCTCTTGGGCGAGAACCAAATACCCGAGCTCACATTCTTCCACGTAAATTCCAACGGCTTCGCCGGCTCTGTCCCCAGCGATGTCATCAATTTCCCTTACTTCTTCGAGCTCGACCTCAGTAACAACAAAGTCAAAGGCCAGTTTCCCCTCGACGCCATTAAGTCAAACCAACTGGTTTTCCTCGACCTCCGCTTCAACGAACTCACCGGCCCGATTCCCTTCCAACTCTTCCAGAAGGATCTCGACGTCATCTTCATCAACAACAACCATTTCACACAGTACCTCCCCCAGAATTTCGGCTCCACGCCGGCCCGCTACCTCACTTTCGCCAACAACAACCTCACCGGCCCGATTCCCAAGAGCGTCGGTTACGCACCCAACCTCACCGAAGTTCTCTTCCTCGGGAACCATTTCGACGGCTGCTTGCCCATTGAAATCGGAAACCTTAAAAAAGCTATCGTCTTTGATGTGAGTAAGAATTCTCTAACCGGCCCAATCCCTCTCTCTTTCGGGTGCTTGAAGAGCATTCAGTATCTGAATTTGGCGAACAACAAATTCTACGGCTGTGTTCCCGACAACCTTTGTCAAATTCCTTCTCTCCGCAACAATGGGAATCTCTCCTTGGCCAACAATTACTTCAACGAGCTTGGCCCCTCCTGCTGGAGTTTGATCAAGTCCAAGGTTTTGGATGTCTCAAATAATTGCATCCATGGGCTGCCAAACCAAAGATCACCCACCGAATGCTATTACTTTTACAAGACGAAGAAGACGTGTCCGAATCCGAGTTCTTTCTATACAGTGCCGTGTAAATCGCACTGGGGAAAACCCAGTTCCGAAACCAATGTTCCAACCTCTGCACCGGTGACTTACAAAGCTCTTAAACCGCATCGTTTGAGATTATGATGGATGAGATATCTCATACTTGTGCTGAACTATTTGTTGGAGTTCATGATACTAATTAATGAACGTGCTTGTCTTTTGTATATTTCTCTTTCCTATTAGCTGTTGTTTTTGTATTCTGTATGCCCATTAATAAGCACCGTGGTTGAATTGGGCTTCTTGACTATTGCTTCTTTGGTGTCACTC

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