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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_05326 LG1 79921080 79922913 PREDICTED: uncharacterized protein At4g06744-like
Map

Annotations  
category   relationship type   keyword
Cellular Component   located in   nucleus, chloroplast
SNP Position Effect Amino acid change
A/C 79921147 3_prime_UTR_variant
T/A 79922687 synonymous_variant p.Ser16Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_05326.1
MGTTTKTIFSSFLLCSLLLHLYFSEGVVAQEVVAKSESEALGEAEKRETLEIIIGGGGSPAPSPSPEAPCPPPPPKLNRLDRARRALLNFKNLIDDPNCYTQNWNDQTDTCDFKGIRCATYPTDKQKAVAGVDLNGARVTGQNGCALPLSSLLGQNQIPELTFFHVNSNGFAGSVPSDVINFPYFFELDLSNNKVKGQFPLDAIKSNQLVFLDLRFNELTGPIPFQLFQKDLDVIFINNNHFTQYLPQNFGSTPARYLTFANNNLTGPIPKSVGYAPNLTEVLFLGNHFDGCLPIEIGNLKKAIVFDVSKNSLTGPIPLSFGCLKSIQYLNLANNKFYGCVPDNLCQIPSLRNNGNLSLANNYFNELGPSCWSLIKSKVLDVSNNCIHGLPNQRSPTECYYFYKTKKTCPNPSSFYTVPCKSHWGKPSSETNVPTSAPVTYKALKPHRLRL*


CDS Sequence:
>Vu_05326.1
ATGGGAACAACAACCAAAACCATTTTCTCCTCCTTTTTACTCTGCTCACTCCTGCTTCACCTTTACTTTTCAGAAGGAGTAGTAGCACAAGAGGTGGTGGCAAAATCAGAGAGCGAAGCATTAGGGGAAGCAGAGAAAAGAGAAACACTAGAAATTATAATAGGTGGTGGAGGTTCCCCTGCTCCTTCCCCTTCCCCTGAAGCTCCATGTCCCCCTCCCCCACCCAAACTTAACCGTTTAGACAGAGCGCGTCGTGCGCTTCTCAACTTCAAAAACCTCATCGATGACCCAAACTGTTACACGCAAAATTGGAACGACCAAACTGATACGTGTGACTTCAAAGGGATACGATGCGCCACATATCCAACGGACAAACAGAAAGCAGTTGCAGGAGTGGACTTAAACGGAGCAAGAGTGACGGGTCAAAACGGGTGCGCTTTGCCCCTCTCATCTCTCTTAGGCCAGAACCAAATACCCGAGCTCACATTCTTCCACGTCAATTCCAACGGCTTCGCCGGCTCTGTCCCCAGCGATGTCATCAATTTCCCTTACTTCTTCGAGCTCGACCTCAGTAACAACAAAGTCAAAGGCCAGTTTCCCCTCGACGCCATTAAGTCAAACCAACTGGTTTTCCTCGACCTCCGCTTCAACGAACTCACCGGCCCGATTCCCTTCCAACTCTTCCAGAAGGATCTCGACGTCATCTTCATCAACAACAACCATTTCACACAGTACCTCCCCCAGAATTTCGGCTCCACGCCGGCCCGCTACCTCACTTTCGCCAACAACAACCTCACCGGCCCGATTCCCAAGAGCGTCGGTTACGCACCCAACCTCACCGAAGTTCTCTTCCTCGGGAACCATTTCGACGGCTGCTTGCCCATTGAAATCGGAAACCTTAAAAAAGCTATCGTCTTTGATGTGAGTAAGAATTCTCTAACCGGCCCAATCCCTCTCTCTTTCGGGTGCTTGAAGAGCATTCAGTATCTGAATTTGGCGAACAACAAATTCTACGGCTGTGTTCCCGACAACCTTTGTCAAATTCCTTCTCTCCGCAACAATGGGAATCTCTCCTTGGCCAACAATTACTTCAACGAGCTTGGCCCCTCCTGCTGGAGTTTGATCAAGTCCAAGGTTTTGGATGTCTCAAATAATTGCATCCATGGGCTGCCAAACCAAAGATCACCCACCGAATGCTATTACTTTTACAAGACGAAGAAGACGTGTCCGAATCCGAGTTCTTTCTATACAGTGCCGTGTAAATCGCACTGGGGAAAACCCAGTTCCGAAACCAATGTTCCAACCTCTGCACCGGTGACTTACAAAGCTCTTAAACCGCATCGTTTGAGATTATGA


Promoter Sequence:
>Vu_05326::LG1:79922913-79924913(-)
ATTATAATTTTATTAATCATGAAGCAAGTACAAGTTCTATAATTCATCATTAGGGAAATCATCATATTTTTTCATCTAAATGACACTCAATATTAGTTAGCCTATTATCTAAATAAAAAATGAGGTCACATAGATGGCCAGATCGAATGTCTTGAATTAGTTGAGATTTTCTTGAATTGGGAAGAAAAATTTGTGATAGTTCATGTTTTCAATTTTTTAAATTTAATTAACAAAAAAAAAATCAAGTGACATGTATATAGTGAAATGTCAAAAAATAAAAAGTTATGGTGCAATGCTACTAGACAACTGAGCAAATTGTTCATGTCATTACATTCTAATGATTAAATTCACATATTTCTAAAATTAGTGATTAGATTGAGTCAAAGTTTTAGAAAGTGAAATTTAAGAAACTAAAAACATATTTAACCATTATTTATATTAACATAAATATAATAATTATTTTCTTAAATTTATGTATTTACACTATTTTAAAAATATTATTTATTTTTAGGTAAATATTACAATCCTATACTAAAGTGTTAAACTAATATCTTCACGAATTTATTTTTCACAAAAAAAAAATGGATACACATATTTTGTTTTACCATTTACTCAATCATCGAAACGTCTCGTGCAAAATGTCTTCCCCACCGTTCTTCTCCTTGACCTCAAGAACTTAAAAGAACTTCAAGACATCTAGGAGCGACAAGAAAGTCCTTAAGCGAGTACAACACATCAGAGCTTGAAGGCACGAAATGAAAGCATCCAATGTCCCTAATGGTTAAAATGTGACATTTTTTAGATATTGATATCTATTAAAATCTTACTACTATTCAGGTGGGATTAACACTTTTAATTAACACAAAAATGACGGACAATGAATGTCAAAGTTAGACAATCACAAAGATAAATTATGTATAAATAACATTTACATTAATATAGAGCAAAACAATCAACATTGTCACTATGAAAATGACACGACACGTTTACAATTATAAGCTCTATGAAATGATTAATTTTTACTAAAATGTTTGTCTTATAGTCCTACAAATGACGGTGATAGTGTTGATGAACTTAATACAATTTTACTTACACAACTAAATTTAATAAATATAATTCAAAATACTTACTACACTTTCAACACTTATCTAATATTATTTAGTATTCACCATATGCAAACATGCCTAACTTAAATAAACAAAATGATGTACAGAGAGAATGCATAAAAAAAAACTCTAATAACTAATATGATAAACAATATGATGTACTGAGAAAATGCATAAAAAAAAAACTCTAATAACTGATATGACGCAAAGAGAGAAGTGAGAGTAATGATATATGAATAACACTAAAAAAAATTCTTAAACAAAAACCAATTTTAGATAAAAAAAAATCACAATAATAATTAATTTATGAATATAAAATTATAATTAATTTATAAATTAAACTTTAAATTAATTTCTAACCTTAATTATCAAAGAATTAATGAATAAATTATTTTTTAATTTTAATTAAAGACTAATTTAAAATCTAATTATCTAATAACATTTAACATAGCATTTAGCTATCCGTTGATGTAATGGTATGGGTTCATTGCATAATTGAGATTTAATATATTTTGGTTGACCCGTTTTACTACCCAATAATACTTCTGTTTCCTGGTTTTTGTAACTAAAGTTTTTCAAATAATTCATATCCATACTTGGTAATAAGGTAAACTATATGTAAATATGTATATAAAATGACTAACCAACATGGCCAATATATAATGAGAATACGATAGCAAAGGCATTTCTTAAAAAAAAAAAGTATTTAAAAACAAACCAAGAATTGAATAGTTTTTAGCAAATACACATTTAAACTCATATAAACAGCATAAATTATAAAGAAATACTTCCAAAGAAAAATTTAGTGTATGGTGGTTGTCTTGTTCTTCTTTTTGTTTTGGTAGTATTTGGCTAAAAAAAGGTAGAGAACATGTCAAGTGGACGACTCGGTAG


Gene Sequence:
>Vu_05326(-)
AATAGAACAAATCATTGTCCTTCATTGATAAAGAAAGCCTAACAGCTTCTCACGAGAGTGCAGAATATCTTGGCCTCCATCGAATTCAAGCCTATTGACTTTTCTCCGACTTAGCAATATCTTGAGCAAGACAGTATATAAGGAGTTGGAAAACCATCTTTTCTTCCTCAATCACCAAGATGGGAACAACAACCAAAACCATTTTCTCCTCCTTTTTACTCTGCTCACTCCTGCTTCACCTTTACTTTTCAGAAGGAGTAGTAGCACAAGAGGTGGTGGCAAAATCAGAGAGCGAAGCATTAGGGGAAGCAGAGAAAAGAGAAACACTAGAAATTATAATAGGTGGTGGAGGTTCCCCTGCTCCTTCCCCTTCCCCTGAAGCTCCATGTCCCCCTCCCCCACCCAAACTTAACCGTTTAGACAGAGCGCGTCGTGCGCTTCTCAACTTCAAAAACCTCATCGATGACCCAAACTGTTACACGCAAAATTGGAACGACCAAACTGATACGTGTGACTTCAAAGGGATACGATGCGCCACATATCCAACGGACAAACAGAAAGCAGTTGCAGGAGTGGACTTAAACGGAGCAAGAGTGACGGGTCAAAACGGGTGCGCTTTGCCCCTCTCATCTCTCTTAGGCCAGAACCAAATACCCGAGCTCACATTCTTCCACGTCAATTCCAACGGCTTCGCCGGCTCTGTCCCCAGCGATGTCATCAATTTCCCTTACTTCTTCGAGCTCGACCTCAGTAACAACAAAGTCAAAGGCCAGTTTCCCCTCGACGCCATTAAGTCAAACCAACTGGTTTTCCTCGACCTCCGCTTCAACGAACTCACCGGCCCGATTCCCTTCCAACTCTTCCAGAAGGATCTCGACGTCATCTTCATCAACAACAACCATTTCACACAGTACCTCCCCCAGAATTTCGGCTCCACGCCGGCCCGCTACCTCACTTTCGCCAACAACAACCTCACCGGCCCGATTCCCAAGAGCGTCGGTTACGCACCCAACCTCACCGAAGTTCTCTTCCTCGGGAACCATTTCGACGGCTGCTTGCCCATTGAAATCGGAAACCTTAAAAAAGCTATCGTCTTTGATGTGAGTAAGAATTCTCTAACCGGCCCAATCCCTCTCTCTTTCGGGTGCTTGAAGAGCATTCAGTATCTGAATTTGGCGAACAACAAATTCTACGGCTGTGTTCCCGACAACCTTTGTCAAATTCCTTCTCTCCGCAACAATGGGAATCTCTCCTTGGCCAACAATTACTTCAACGAGCTTGGCCCCTCCTGCTGGAGTTTGATCAAGTCCAAGGTTTTGGATGTCTCAAATAATTGCATCCATGGGCTGCCAAACCAAAGATCACCCACCGAATGCTATTACTTTTACAAGACGAAGAAGACGTGTCCGAATCCGAGTTCTTTCTATACAGTGCCGTGTAAATCGCACTGGGGAAAACCCAGTTCCGAAACCAATGTTCCAACCTCTGCACCGGTGACTTACAAAGCTCTTAAACCGCATCGTTTGAGATTATGATGGATGAGATATCTCATACTTGTGGTGAACTATTTGTTGGAGTTCATGATACTAATTAATGAACGTGCTTGTCTTTTGTATATTTCTCTTTCCTGTTAGCTGTTGTTTTTGTATTCTGTATGCCCATTAATAAGCACCGTGGTTGAATTGGGCTTCTTGACTATTGCTTCTTTGGTGTCACTCAAATGTAATTTCTGTAAGTGGTCGAATAAAATTTGTACTATCTTTGCATGAGAAGATGTGTACCTTGTAATAGAAATTTGTTTGTTTGGGCAATTTTAAAAGCAGAGAATTAATGT

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This project is funded by the Department of Biotechnology
Ministry of Science and Technology
Government of India

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