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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_05205 LG1 76993250 76994427 hypothetical protein LR48
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 76993289 intron_variant
G/T 76993314 intron_variant
G/T 76993532 intron_variant
T/C 76993582 intron_variant
T/A 76993644 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_05205.1
MTLSILDGTSGCPFGESCHFLHYVPGGYNAVAHIMNLTPAAPPASRNVAALPPVPNGSAPPAVKTRICNKFNTAEGCKFGDKCHFAHGEWELGKQIAPSFDDHRALGPTAAGRFGGRMEPSPGPATSFGSHATAKISVEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNIRNIELEGNFEQIKEASNMVKDLLLTLQMSASKANPGVPGAPIREHGSNFKTKLCENFSKGSCTFGERCHFAHGASELRKSV*


CDS Sequence:
>Vu_05205.1
ATGACATTAAGTATTTTGGATGGCACTTCTGGTTGTCCGTTTGGTGAGAGCTGCCACTTCCTGCATTACGTTCCTGGTGGCTATAATGCCGTTGCCCATATAATGAATCTAACACCTGCAGCACCTCCAGCATCAAGAAATGTGGCAGCTCTGCCACCTGTACCAAATGGGTCTGCGCCACCTGCTGTAAAGACCCGCATATGCAACAAATTTAATACTGCTGAAGGTTGCAAATTTGGTGACAAATGCCACTTTGCCCATGGTGAATGGGAACTTGGGAAGCAAATTGCTCCATCATTTGATGACCATCGAGCGTTGGGGCCGACTGCAGCAGGTCGTTTTGGTGGTCGAATGGAGCCTTCTCCTGGTCCTGCTACAAGTTTTGGTTCCCATGCCACTGCCAAGATAAGCGTAGAAGCATCCCTGGCTGGTGCAATCATTGGGAAGGGTGGTGTGAACTCAAAACAGATATGCCGCCAAACTGGAGCCAAACTTTCGATCAGGGAGCATGAATCGGATCCTAATATTAGAAACATTGAACTAGAGGGAAATTTTGAGCAAATCAAGGAAGCTAGTAATATGGTGAAGGATTTGCTACTGACCCTGCAAATGTCTGCATCAAAAGCTAACCCAGGTGTTCCTGGTGCACCTATTCGAGAGCATGGAAGCAATTTTAAGACGAAGCTGTGCGAGAATTTTTCCAAAGGGTCTTGCACATTTGGAGAGAGATGCCACTTTGCTCATGGAGCTTCCGAATTGCGTAAATCAGTATGA


Promoter Sequence:
>Vu_05205::LG1:76991250-76993250(+)
ACTCAGTTTAACTCAATGATAAAGACCATAAGGAGTGACAATGGAACAAAGTTTTTTATAATTAATTTTTATGCTAATAAAGGGATAATGCACCAAACCTTGTCTTAACACATCTGAACAAAATGACATTGTTGAGAGAAAACATTGGCACCTTTTGAATGTAGCAAGAGCTTTGGTTACACAATCCAATTTACCAAAATTATACTGGTCTTTTGCTGGGTCACATGCTGATTTTATCATCATGTTGCCTACACCTGTTCTTCCCCACATAAGGCTTTACATAAAGCAAAACTCGATTTTTCTCAACTAAAGGTTTTGGTATATCTTTGTTCTGTCAGTACCTCACCTGTTCATAAACCAAGTTTGATCCTAAGGCCTGCAAATGTGTTTTCTTAGGATATGAAACTTGCACAAAAGGGTGTTTCTAGAAATTTTGTTTTCTATGAAAGGGTGTTTCCATATTGCGAAATAGAGACCAAAGGTAGTGAGGTTGACCGATGTACTTTCCCTAATGGTGAAAATCATAGCAATCAATATCCAATCTCCCAAACCCATGATCCTCAAGTTCATATTCCTATTGATGTTAGTCAGCCTATTGAGCCTAAAATTGTTCCAAACACTCCTGTCCTCAAGCTCAACCTATCATTCATCCGATTCAGAAGAAACAAACTCCCGTCCTACAACTGAAACCAATGTTTCAATTGAAATGAACATTGCAAGTACACCTCCTCACCATAGCACTAGAGTAAGAAAGCCTTTAGGTTATTTGAAGGATTATTATTGTTATATCAACATGGTCTCCGATACCTCTTCCAAGGTTCTCTATCTACTTTCTCCCGTTTTATCATATACACACTTGTCTTCATGTTATAATTCCTATGTTATGTTTCAAAATCAAACGCAAGCAAATGGCACAATAGAGAGATAAAAAGCTTGCTTAGTAGCAAAAGGTTACACTCAAATTGAAGGCATTAATTATCTGGATATGTTTTCACCTGTGGCAAAGATAACCACTGACAGGTTAATTCTATCTATTGCCTCCATGTTGAAATGGAAACTAAGGCAACTTGACATCAACAATGCCTTTTAACCTGGTGAGGTGAAAGAAGTTTACATGATGGCCCCTCTTGGATTGAATAAAGTCTTGTCGGTACAAGTGTGTAAACTATAGAAGGCATTATATGGTCTTGAATAAAGTTCGCTAAACTCTCCTCATTTCTTCTCTTTACTGGCTATGCATGATTATTCTTTATTTGTTAAGTTAATAACTCCTTCACAATATTTTTAGTATATGTGGATGATATGATTTTGGCAAGAAATACTGATCAAGAAATAGCACAAATTAGGCAAGCCCTTGATGATCCCTTCCCATCAAAGAGTCCGGAGAATTATGGTTTTTTCTTGGTTTTGAAGTGGCATGGTCAAAGAAAGGTATCTTGATGTGCCCGGGATAATATATGGTGGAATTTCTAAGTGACCCATGTCTTTTGGGATGCTAAACATCTTCACCGATGGATAATACTTAGAAGATTTCAATTGACTCAGAAGAATTACTTATGATTTTCTTAGCTATAGACATCTCATAGGAAGACTCGTGTATCTCACAAGCACACAGCCATATATAACCTATGTTGTGCACTATCTTGTGCAATTTCTTTCTAAGCTGACAACCATCCATCGCAATTCTGCCCTAAGGATCCTTCGCTACATAAAAAAGAACACTAGGCCTAGAATTGTTTTTCCCATCTGATTGTGACCTTCAATTCAAAGCTTATAGTGACAAGGATTGGCCTCTTATGCTGATACAAGGAGATTCCTCTATATTCCAATATTTTCCGGTTCACAACGCTGTTTGGTTACCAGTTGCCAATCTAAAAAACATATTCATTTATTTGCTGTTGTATATTTATGTTTGAGTTCTTTGAATGCTTGTTCTTTGATTTTTCAAATTTTTATTGGTGTTTGTCTTTACTGTGATTATATTTCAGATTGAGTAGAGA


Gene Sequence:
>Vu_05205(+)
ATGACATTAAGTATTTTGGATGGGTAAAACTAGAAGCTATACTCATTTATATTAAGTTTTTTAGGCTGTCTATATACTTGTTGCTGTGACTGGTTGATCCTAAGAAGTGGGCCTTGATTGGAGATCTGCCTGTATGACTTTGTCTTTCTTCTGTTTGGCTTATGATGTAGCTGTATTGTTTCCTTTACAATTTGGAGGAACCATTCTGAAACTTTGTTACCTTTAAGCATTACAGTGTGCATGGGTGATGTATCAATATACAACTATATAGTAGACGACTCTGATAGTCTAAGTTACTTGTTTGTCCTATTTTAAAACTCCTTGCTGTAGATTTTGCTAAATAAGCCGGTAGTTTCTTCATGTTACATTTTATACTTAAAGAAGTGGAAACGAGTGTGGTGTAACCTGATTGTGAATTGTCTTGCAGCACTTCTGGTTGTCCGTTTGGTGAGAGCTGCCACTTCCTGCATTACGTTCCTGGTGGCTATAATGCCGTTGCCCATATAATGAATCTAACACCTGCAGCACCTCCAGCATCAAGAAATGTGGCAGCTCTGCCACCTGTACCAAATGGGTCTGCGCCACCTGCTGTAAAGACCCGCATATGCAACAAATTTAATACTGCTGAAGGTTGCAAATTTGGTGACAAATGCCACTTTGCCCATGGTGAATGGGAACTTGGGAAGCAAATTGCTCCATCATTTGATGACCATCGAGCGTTGGGGCCGACTGCAGCAGGTCGTTTTGGTGGTCGAATGGAGCCTTCTCCTGGTCCTGCTACAAGTTTTGGTTCCCATGCCACTGCCAAGATAAGCGTAGAAGCATCCCTGGCTGGTGCAATCATTGGGAAGGGTGGTGTGAACTCAAAACAGATATGCCGCCAAACTGGAGCCAAACTTTCGATCAGGGAGCATGAATCGGATCCTAATATTAGAAACATTGAACTAGAGGGAAATTTTGAGCAAATCAAGGAAGCTAGTAATATGGTGAAGGATTTGCTACTGACCCTGCAAATGTCTGCATCAAAAGCTAACCCAGGTGTTCCTGGTGCACCTATTCGAGAGCATGGAAGCAATTTTAAGACGAAGCTGTGCGAGAATTTTTCCAAAGGGTCTTGCACATTTGGAGAGAGATGCCACTTTGCTCATGGAGCTTCCGAATTGCGTAAATCAGTATGA

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This project is funded by the Department of Biotechnology
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Government of India

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