Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_05162	LG1	76428892	76429248	PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect	Amino acid change
G/C	76428900	missense_variant	p.Gln117Glu
T/C	76429043	missense_variant	p.Gln69Arg
C/T	76429066	synonymous_variant	p.Gln61Gln
T/C	76429225	synonymous_variant	p.Leu8Leu

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_05162.1

MGNISRSLETFTALCELYIGYYNAYSDGILLEIGNLSQLVRFDAAYCRLSGDIPADLGRLQNMDMLFLQVNALSGSLTPKLGNLESLKLMDLPNKVLSGEVPTSFVELKNLTLLLLQL*

CDS Sequence:
>Vu_05162.1

ATGGGAAACATCTCCCGGAGCTTAGAAACCTTCACCGCGCTTTGCGAGCTCTACATTGGCTACTACAACGCTTACTCCGACGGCATCTTGCTAGAGATTGGAAACTTGTCCCAGCTTGTCCGTTTCGACGCCGCGTATTGCAGACTCTCCGGCGATATTCCGGCTGACCTCGGAAGGCTTCAGAATATGGACATGCTCTTTCTTCAGGTGAATGCGCTCTCCGGCTCGCTCACTCCTAAGTTGGGGAACCTGGAGAGTCTCAAGTTGATGGATCTGCCCAACAAAGTTCTCTCCGGCGAGGTTCCGACGAGCTTTGTGGAGCTCAAGAATCTAACTCTGCTCCTGCTACAGCTCTAG

Promoter Sequence:
>Vu_05162::LG1:76429248-76431248(-)

ATTGAAGATAACAATTATCACTCTCTTGCTCTACTCTTTCGATTGCTTAGACAACAGAGATATCCAATTTCATCAGGTACGTGTATACTTTTTCTTTACTATTTGGATGTGAAAATCACAATCTATACATATAATGTTATATATACGTCAAAACACAAAATCAATTAACTATTGTGTACCTTCCATTGTGTAAGCTGCCTTAGCAATTGATAAAGTAAAACGAGATGACAATATGAACCGAGTCCTAAAATCTGAAAAAGAAAACACCCTACTGCCTCGGTTATCTAAGAACCGAGACATAATCCTATCTCGTTTTATCTCGGTTCGTGACCTACTCTTTTTACGTCGCTCATATATGTCTCGATTTCAGAACAGATGTCTATAAGCAAAAATAATCGGTGTCTTTTCTTACTGTACTAGTGTATGCTCCATGATAAAAGTTACTATAGTCATAATAATTTATTATTCAGTTAACGTTTATTTTTCTTTGTACCGTTTAGAGACAAAATTTTACTCCTTGAAACTAAATTCACTTTTAACCGAATTCTATTTTGGAATTAGTCCTTCGAATTATAATATTTTGATCTTTGGGAAAGTATAATATTTTGATGTTTACTATCAATGTTTTTATCATAGAGAGAGTTGTGTCTTAATAATATGTAATAATAAACTCTTTAGGCTATTTATGAGAGTTGTTCCTTTTGAAGTACTTCTATATTTTATAATGACGATTGTTGCTTTAGTCTATTTTTCAACTTCAAACTTCAACAATTGTTTACTTTTGATGTCGCAAGTACTTACGTTTATTTCAAATCTTTTGTTCTGTCATCATATATAGTGTTTGATAAAATTAATTAAAGTTTAAGAGAGTGAAATTAATGGGTTAAATAAAGTAGTTTAGAAAAACTAAAATAAAATATATTATGTAGGGACTTATAAAAATAAATTAAGATAAATATAATTTTATTTTATTATATTATGAAAATAATGATTTTTTACAAAATATTTCAATAAATAAACTCAACAGGGTTAGATACACTACAAAAATATTAAATTTTAGCATAGGTTAGTTTTCGAGGTTATAAAAACCTTCTTAAGTTTCTGGCAGTTTCCACAAAACCGCACTTAAATAATTTTTTAAATTTTTTAAAAGAATTTCAGCGATTTCTAAATAAACCGCCTCTAAGTGAATTTTTTGTTTGTTTTAATTTCTCCAACCTGTGTTCAGACTTTTCCTTCTTCACTTCCAACCCTCTCTCCTCTTCCCAAACCCTATAAAATATTCCATCATTACCATTTTCGTCATTGGTGGAAGCGAGCGTTGGTGGGCGGTGCTTTTTGGCCGTCATTTTCATTGGAAGGTGTGGCGACATTTCCGTGTAAGCTCTCTCTCACTCTCTATGTTTGTTAGGGTTTTACTCTAGGTCTAGACACACTAGTGCAATCGGAGGAAACGACAGCGATTATTTTCGCTAATAGGCACCGGTTTTTAAACCGAGACATATTCAGACGAGGTAAAAAGTGATAGACTTTATGCATCGATTCAGAACCGAGTCATAAAAATAGTAAGATTATGCCTCGGTTTAAAATTAACCGAAGTAGTAACATTTTTTATTTTTTTAAATATTTTTTTCGCTAGCCTTTATGCCTCGGTTCTCAGGAACCGAGGTCGTTTCTCTCCCTCTCCTGAACCCCCATTTCCTCTCCTACCTTTCCCTCGTCGAGAACCAATTTTTCGGCCCAATCCCCGCCTCCTTCTCTGCACTCTCCGCCCTCCGCTATCTCAACCTCTCCAACAATGCCTTCAACGCCACCGTCCCCTCCAACCTCGCTCGCCTTGCCAATCTCCAAGTCCTTGATCCCTACAACAAAAACATGACCGGTCCCTTCCCCCTCACCATCGCCGCCATGCCCCTCCTCCGTCATCTCCACCTTAGCAGCAACTTTTTCTCCGGCCAGATCCCTCCCAAGTAAGGCACCTCGCAACACCTAACGAACTC

Gene Sequence:

>Vu_05162(-)