Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_05030 LG1 73808026 73809120 PREDICTED: ethylene-responsive transcription factor ESR2-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of cell cycle, response to auxin, cotyledon development, regulation of cell cycle, response to auxin, cotyledon development, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, cotyledon development, embryonic pattern specification, embryonic pattern specification, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, cotyledon development, cotyledon development
Cellular Component   located in   nucleus
Molecular Function   enables   protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, DNA-binding transcription factor activity, protein binding, protein binding, protein binding, protein binding, protein binding
SNP Position Effect Amino acid change
A/C 73808078 missense_variant p.Leu348Arg
G/T 73808197 synonymous_variant p.Pro308Pro
G/T 73808201 missense_variant p.Ala307Asp
A/G 73808519 missense_variant p.Leu201Pro
G/T 73808549 missense_variant p.Ser191Tyr
G/C 73808722 synonymous_variant p.Gly133Gly

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_05030.1
MEEALRRLNGVTPTQEPDVVSDPHPKKCAAKRTSRDTANSGTAMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGVKARTNFVYPDAADPHLFHPFNLPKHCHVGRFPHNTNLGSDFPASSHNSSSSSTSSLNMLLFRDFLNSSSNPCLLSSASSQQFHDSKSASYVNPSSSTLSPTATNYLHGCCVGNADNYQNTVSANHGVEVADVIDEDSDFFPRESSDSGLLEEIVHKFLPKSKPKVETSTLSQSLPEVPQQIFDHVVVSASKGYGDSRMRVPKVEGFGVCHDAPMQQFEALSGFNAMHGMTSIQRDNQLMLNHIPGFSSIEDYLQYSELFNSFATRMQNA*


CDS Sequence:
>Vu_05030.1
ATGGAGGAAGCATTGCGTCGTCTTAACGGAGTCACGCCCACTCAAGAACCCGACGTCGTTTCAGACCCTCACCCCAAGAAGTGTGCTGCCAAGCGCACCTCGCGTGACACCGCCAACTCCGGCACCGCCATGCGCTACCGTGGAGTCCGCCGCCGCCCCTGGGGTCGCTACGCTGCTGAGATCCGTGACCCGCAATCTAAGGAGCGGCGCTGGTTGGGCACTTTTGACACGGCGGAGGAGGCTGCCTGTGCCTACGACTGCGCCGCCCGAGCTATGAGAGGTGTCAAGGCCCGCACCAACTTCGTCTACCCGGACGCGGCTGATCCCCATCTCTTCCACCCCTTTAACCTACCCAAGCACTGCCACGTCGGCAGGTTTCCCCATAACACAAACTTGGGCAGTGACTTTCCTGCGAGTTCCCATAACAGCTCTTCATCCTCTACCTCCTCTCTCAATATGCTTCTCTTTCGTGACTTCCTTAACTCTTCTTCTAACCCGTGTCTGCTTTCTTCTGCTTCTTCTCAGCAGTTTCATGACAGTAAATCCGCTAGTTATGTGAACCCTTCTTCTTCCACTCTATCTCCTACTGCTACTAACTATCTCCACGGTTGTTGTGTCGGCAACGCTGATAACTACCAGAACACTGTTAGTGCCAATCATGGAGTTGAAGTAGCTGATGTTATTGATGAAGACTCCGACTTTTTCCCGCGTGAATCTTCGGATTCTGGGCTGCTGGAAGAGATAGTTCATAAGTTCTTGCCGAAATCGAAGCCTAAAGTGGAGACTTCGACTTTGAGTCAGTCTCTTCCCGAGGTTCCTCAACAGATATTTGATCATGTGGTTGTTTCTGCTAGCAAGGGTTATGGGGATTCCAGGATGAGGGTTCCCAAGGTTGAAGGTTTTGGTGTCTGTCATGATGCTCCCATGCAGCAATTTGAAGCTCTTAGTGGTTTTAATGCTATGCATGGGATGACCTCTATCCAGAGAGACAATCAGCTTATGTTGAATCACATTCCAGGATTCTCCAGCATTGAAGATTATCTTCAGTATTCCGAACTTTTTAATTCCTTTGCGACCAGGATGCAAAATGCTTAA


Promoter Sequence:
>Vu_05030::LG1:73809120-73811120(-)
TTCCGAGAGCTCCAAGGCTTAAGTTGGGCGTCAAATAACTGTTATTAGGTGCTGGACGGGATGTTGAACACGGATGCCTTACTGCTGGGTGTGAATTCATAAAAGGAATGTAATTTAATAGGTTTAAGATCATATTTACATATGTATGTATGAATATGTGTGGGATTGATATATGATGTATGAATGGTATGAACGAGTAATATTAAAATGTTTTAGATTGTGTGTGTGATAATAATTAATGGATGGTTTGATGATATGAAACTGAAATTTGTGACTTGGGTGGATGATGAGAGTGTAATGATATTTAGGAGGAAGTGCTGTATTGAGTTGAATTTATGATGTATTGAATTGTGATTTAATAAGAATATTCTAACTTTCTTAGAATACATGCTTACACATAGAAAAATATTTGCTCGTGAGAGTCGAGTAAGGTTCTTTCAATACGGTACTTTTGATATAAAAGATGATCGAATTACGTAGGTATAAAAATTTACCTTCTCATATTTAATAAGAACATTGATTTTAGTTTGTTATTACGTGAAAATGGATTTCGTGAGAATATAAAATAATATGATAAACACAAAATTTCTAAGTTTACTCAACATGTGTTTTATAAAAATAAGATTAAATATATAAATCTTATTTATTATAAGAGTTGTAGTTATAAGTTGTATAAGTGAAAACATGATTAATGTAGACATTTGATTCTTATTGAATTTGTTGGATAAGTAAATTGATTGGAATTGTATTATAAGATAATGACAAATAATTTGTATGAATTATACAATTACACTAATGAACTTACTTTTGGTTTGATTTGTGGTTTATCTTGTGTCGTATATTATAAGGAAACGTATAATGATGGAAATGTTAGAAGTAAAACTGTTGATGGGCTTATGAGAGCTATACTTGTCTTTAATCATATTGTTGTATTTTGTATAATCTTTTAAATATTGAACTGATTTTATATTTTGAAAAATTGTTTATAATATATTTTGAAAATTATGGAGAATTGTAAATCCAAACGGTGTATGTTTATGCTTAATACTAAAACTGTATAATACGATCTAATCAGTAGTATAATAAGATAGGGTGTAATATAATCATTGTGAGAAAAGTAGATATGTAAAATCTAAAGGAAAATATAATATTCCATAGTAAACCAACTTACCTTCATTGAAATGCAGTAGTTCAATACTTTGAAGGTTGTAGGTTACAGCACAACACCTTTTTGTTCATGACCTAGCAGTTGAATATAGACTGCATAAAATGCAACATAGTATTGTCAGAAATTACAGCTTTGAAATCACATTCAATACTTTACTTTTACACCATAGACAAAGTCAGCAATTAAAATTTTTTTTCTTTTTAAATGACTCCAATTAAATACGAACAAAAAAGTTAATTTGAATGTTTTATAAGAATATAATTTAAGTATACTGGTTTAATTAAAAATTATATATCGTTTTTATTGAGAAGAGAAAAAAAGAATCTTTTGTTTGTTAATGGTACATAACTTACATGTTCTCTGAGTTCTCAAATAAATCAATAAAGAAGATTAAATTTTCAATCAATTCTAATATTGGAAATTATAAATTTTCTCTAGAAATTCTTTAAAGAAATCAATAATTATCTGTATTATTAATAAATTTCATGACTTTATGATGTGAAAATAAAATATTTAAATAATACAACAGTGTAAGAAAATTAATAACGAGGAAACTAATGACACTGAAAATTCTAGAGAAGTGATATACTTTTACTAACTAAAACTAATTAAAAACTGAAAATTAGAATGAAATTCATAAGGTTTATTTTAGAGCAGTTGATATTGATTGTAGTAAGAGAGAGTGAGTTGATGTAATGTTCTAGTAACCAATGGTCAACTGTTTGTCAAAATAGTATAAATAAAGCTACCCACACGAGCAGAGAATAAGCTCTCTCCAACTTCAAAGTGAGAAGAAGAAAGCTATCACACGCTTCTCATATCCAATACAATC


Gene Sequence:
>Vu_05030(-)
ATGGAGGAAGCATTGCGTCGTCTTAACGGAGTCACGCCCACTCAAGAACCCGACGTCGTTTCAGACCCTCACCCCAAGAAGTGTGCTGCCAAGCGCACCTCGCGTGACACCGCCAACTCCGGCACCGCCATGCGCTACCGTGGAGTCCGCCGCCGCCCCTGGGGTCGCTACGCTGCTGAGATCCGTGACCCGCAATCTAAGGAGCGGCGCTGGTTGGGCACTTTTGACACGGCGGAGGAGGCTGCCTGTGCCTACGACTGCGCCGCCCGAGCTATGAGAGGTGTCAAGGCCCGCACCAACTTCGTCTACCCGGACGCGGCTGATCCCCATCTCTTCCACCCCTTTAACCTACCCAAGCACTGCCACGTCGGCAGGTTTCCCCATAACACAAACTTGGGCAGTGACTTTCCTGCGAGTTCCCATAACAGCTCTTCATCCTCTACCTCCTCTCTCAATATGCTTCTCTTTCGTGACTTCCTTAACTCTTCTTCTAACCCGTGTCTGCTTTCTTCTGCTTCTTCTCAGCAGTTTCATGACAGTAAATCCGCTAGTTATGTGAACCCTTCTTCTTCCACTCTATCTCCTACTGCTACTAACTATCTCCACGGTTGTTGTGTCGGCAACGCTGATAACTACCAGAACACTGTTAGTGCCAATCATGGAGTTGAAGTAGCTGATGTTATTGATGAAGACTCCGACTTTTTCCCGCGTGAATCTTCGGATTCTGGGCTGCTGGAAGAGATAGTTCATAAGTTCTTGCCGAAATCGAAGCCTAAAGTGGAGACTTCGACTTTGAGTCAGTCTCTTCCCGAGGTTCCTCAACAGATATTTGATCATGTGGTTGTTTCTGCTAGCAAGGGTTATGGGGATTCCAGGATGAGGGTTCCCAAGGTTGAAGGTTTTGGTGTCTGTCATGATGCTCCCATGCAGCAATTTGAAGCTCTTAGTGGTTTTAATGCTATGCATGGGATGACCTCTATCCAGAGAGACAATCAGCTTATGTTGAATCACATTCCAGGATTCTCCAGCATTGAAGATTATCTTCAGTATTCCGAACTTTTTAATTCCTTTGCGACCAGGATGCAAAATGCTTAA