Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_04909 LG1 71276129 71276680 PREDICTED: transcription factor DIVARICATA-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to gibberellin, positive regulation of transcription, DNA-templated, response to water deprivation, positive regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, negative regulation of response to salt stress, response to water deprivation, regulation of abscisic acid-activated signaling pathway, response to salicylic acid, regulation of abscisic acid-activated signaling pathway, regulation of abscisic acid-activated signaling pathway, response to water deprivation, response to gibberellin, positive regulation of abscisic acid biosynthetic process, regulation of transcription, DNA-templated, positive regulation of developmental vegetative growth, regulation of leaf morphogenesis, regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, regulation of leaf morphogenesis, regulation of transcription, DNA-templated, regulation of abscisic acid-activated signaling pathway, response to salicylic acid, positive regulation of abscisic acid biosynthetic process, positive regulation of transcription, DNA-templated, response to salt stress, response to salt stress, positive regulation of abscisic acid biosynthetic process, regulation of abscisic acid-activated signaling pathway, positive regulation of abscisic acid biosynthetic process, response to gibberellin, positive regulation of abscisic acid biosynthetic process, negative regulation of response to salt stress, response to gibberellin
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, protein binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
C/G 71276248 missense_variant p.Ala145Pro
T/A 71276345 synonymous_variant p.Pro112Pro
T/A 71276666 synonymous_variant p.Thr5Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_04909.1
MLPITIFVFNNYTLIRLNRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDVSAPQGPITGQTNGSAANSGKPTKPAPPTPSAAPSVGIYAAPTIGQPIGPLVSAVGTPVNLPASAHMAYGLGAPVPGTVVPGAPMNLGPVPYPMPHTSAHR*


CDS Sequence:
>Vu_04909.1
ATGCTTCCAATCACAATTTTCGTTTTTAACAATTACACACTGATTCGCTTGAACAGGTTATTTCTTCTTGGCTTGGAAAAATATGGAAAAGGTGACTGGCGAAGCATATCAAGGAACTTTGTAGTGACAAGAACACCTACACAAGTTGCAAGCCATGCCCAAAAGTACTTCATTCGGTTGAACTCGATGAATAAAGATAGAAGGCGATCCAGCATACATGATATCACCAGTGTCAACAATGGTGATGTTTCAGCACCTCAAGGACCAATTACTGGCCAAACAAATGGTTCTGCAGCAAACTCTGGAAAACCAACGAAACCAGCCCCTCCAACCCCAAGTGCTGCCCCAAGTGTAGGAATATATGCTGCTCCTACCATTGGACAACCTATAGGACCTCTTGTATCTGCAGTTGGCACCCCAGTGAACCTTCCTGCCTCGGCACACATGGCATACGGTCTTGGTGCCCCGGTTCCTGGGACAGTTGTTCCTGGAGCCCCAATGAACTTGGGTCCTGTGCCATACCCAATGCCACACACATCTGCTCATAGATGA


Promoter Sequence:
>Vu_04909::LG1:71276680-71278680(-)
TTGGGTGAGAATTTCAAGAGCATAATTGAATTTCCCATGTGCTCCTAGAAAACCAGTGCCACTCATGGATCTAGTCACATTTAATGTATGAAATGTGATGCAAGGTCCATGTGCGCCTAGTATTAGATCATGACCGGCCTAGGGCGCTTGGATCAAAACCCCAATATCTATTTACAAGTCCAGTCCATGCAAGGCAACCCTAGACTCAAAACCTAGTATATTTCAGGCAAGGAAATCCTGAATGATAGGGTGCTGGGAGAAATTTGATAGGGTGCAAGAAGCAATAGCCTTATTGTTTTTCTTTACAAATTTATAATCCACTAGAGATGGCCCATGTAAAGTGTTTTGGGCCCACAAAGGCGTCAGTAGAAGCCCAATCTTCATGTATTCATAGTCATGGTTCTAGTGCTTGGTCAGATATTAAGGATATTTTTATTCTAGTAATTTACTATTTACAACAAAAAAATGTCCACACCTTCTTTAACTTTTAACTTCATAAGAACATATTGATAGGTATTCCTGGAACATAGGCACCAAATTGTGCTTCTGCCATACCTTATATTTGAGGAAAATACGTTAAGGTTTAACACTTGTCAAGGTGATTTTAAGGAAGTAACAGCCCTGGATCAAGTCCGAGGCTTGTAAACTTGAAGCTTTTTCTGCTTGTTTTTTATTTTGCTTTTTGACTACATCTTGAATTTCTTCCTCCTTTTCAGATTGATCAACCCAAGATTGATTGATCAATTGAATATCGTTTTGTACAACTGTTGTCATGTTGGTTTCAGCACAATCCTTATCTTTTTTGCATAAGGGGTGGCATACTACCATAATTTGTGGTCTCAGAACCCTTAACACTGCTATTGTATCTGTTGTGTAATATAATCCTGTTGCTCTTCTTCTCAAATCCTTACTGTTGTACCAGTTTCTTTGCTAACTAAAATTATATTATTCAGATCCATATTATCCACTTGTGCATCTGAATTCCACTCTTCACGAAGATCATCTACTAAGTCTTGTACCTTATTCATATCAGTTTCCTGAATTGATTCTATTATGTCAACATTGAGAAACATTATCTCCTATAGAGTGACAACCAAGAAAAAAATCTGGGAGCCTTTCATAAATATTTTACAGAAAAAAGAAAGAAGCGAAACCTTCACTTTTTACCGTAAGTTGATCTCTCATCCTCAAGATTAACGTCGACCAAAATTCTTGCAGAATGGCCATATTTTTAATCGATAGTAGCTGCATCTATAGAAATATGCTCACCTACACCTGTTTCTAGAACATATATGGGATCCTTAACACGCCCAATATTCTTGTGGAAGATTAAAATACGAAGCCAAACCTGAACTAGAGTTTCTGTGTCTAGTTTCCACAATGACGTCCTCAAGATTTCAGGGTTCATGTTCCGAGATTCAGCTGCAAGAACCCATCTCAAATCATCTGAAGTGTTAATTTAAATTCATAATAGCCTCTCCAGAGAGGAGTCATTTGCCAATCCTGCAATTCTGTCCATAGATCTTGTAGCTTAAGATGCAAGTTATACAGTTTTAATGCCTTTTTCCCTTTAGCCAAGAATGAATCTTCCAAAGTTGAGTTTGCACCTAGCCAACCCATCTCTCTATATACTTCTTTTGATATGGTGATTGCTGAGGCATCTCTTTTAAGCATCTCTATAATTGTTTTTATGTACAGAATCTTTCTTGCTTTCAGTTTGATGTTTAGCCATGTAAATATGACTTTCAGTAATTATTAATCATAAAGATGAATCATATGACTGTCAATATCATATTGACCATAATTTTCAAAGCAAAGTGTTAATTTTAGTCCATGTGAAGGGAATGAAGCTATCTTGAATTTTTAACGTACCAGATATCATTATAGAGTTTTTCTTCTGTTGGAAGTTAAAAACTAAGGATCTGGGTTGCATGTGGATTTGACAATTTTATGAACAATAATGTGCATTTCATTGGTACTTTCTCTTCTGGTATCTTGAC


Gene Sequence:
>Vu_04909(-)
ATGCTTCCAATCACAATTTTCGTTTTTAACAATTACACACTGATTCGCTTGAACAGGTTATTTCTTCTTGGCTTGGAAAAATATGGAAAAGGTGACTGGCGAAGCATATCAAGGAACTTTGTAGTGACAAGAACACCTACACAAGTTGCAAGCCATGCCCAAAAGTACTTCATTCGGTTGAACTCGATGAATAAAGATAGAAGGCGATCCAGCATACATGATATCACCAGTGTCAACAATGGTGATGTTTCAGCACCTCAAGGACCAATTACTGGCCAAACAAATGGTTCTGCAGCAAACTCTGGAAAACCAACGAAACCAGCCCCTCCAACCCCAAGTGCTGCCCCAAGTGTAGGAATATATGCTGCTCCTACCATTGGACAACCTATAGGACCTCTTGTATCTGCAGTTGGCACCCCAGTGAACCTTCCTGCCTCGGCACACATGGCATACGGTCTTGGTGCCCCGGTTCCTGGGACAGTTGTTCCTGGAGCCCCAATGAACTTGGGTCCTGTGCCATACCCAATGCCACACACATCTGCTCATAGATGA