Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_04874 LG1 70590053 70590806 PREDICTED: transcription factor MYB1R1-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of anthocyanin biosynthetic process, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of anthocyanin biosynthetic process
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, DNA-binding transcription factor activity, chromatin binding, DNA binding, zinc ion binding
SNP Position Effect Amino acid change
A/G 70590081 missense_variant p.Leu182Pro
A/C 70590105 missense_variant p.Leu174Arg
G/A 70590114 missense_variant p.Ser171Leu
C/A 70590119 synonymous_variant p.Pro169Pro
G/A 70590121 missense_variant p.Pro169Ser
A/G 70590138 missense_variant p.Leu163Ser
C/A 70590186 missense_variant p.Arg147Met
A/C 70590299 missense_variant&splice_region_variant p.Leu135Arg
G/A 70590315 stop_gained p.Arg130*
T/A 70590445 missense_variant p.Glu86Asp
A/G 70590550 upstream_gene_variant
C/A 70590566 upstream_gene_variant
C/A 70590719 missense_variant p.Ala30Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_04874.1
MCTAEKDGIMLFGVRLTLPDNNPTVFRKSASMNNLSPNSESPPPHHPNAGYASEDVVHLCRRTRKRGIPWTEEEHRQFLLGLQNVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHTHNRRRRRSSLFDITTDSVKEEEQAVPSARSKPVLPAPPSLKMAELDLNGRPLSLKLRLPESEELSPVTFELV*


CDS Sequence:
>Vu_04874.1
ATGTGTACGGCGGAGAAAGACGGGATCATGCTCTTCGGCGTGCGCCTCACCCTACCCGATAACAACCCCACCGTTTTCAGAAAGAGTGCCAGCATGAACAATCTCTCCCCAAACTCTGAATCGCCTCCGCCGCACCATCCCAATGCAGGCTACGCCTCTGAAGACGTCGTTCACCTCTGCCGTCGCACGCGCAAGCGAGGGATTCCGTGGACGGAGGAGGAGCACAGGCAGTTCCTGTTGGGATTACAGAACGTTGGGAAAGGAGATTGGAGAGGAATTTCAAGAAACTTCGTCAAGACTCGAACGCCCACTCAGGTCGCTAGTCACGCTCAAAAGTATTTTCTCCGCCGTCACACTCACAATCGCCGCCGCCGGAGATCTAGTCTCTTCGATATCACCACCGACTCGGTGAAGGAAGAGGAACAAGCGGTGCCGTCAGCTAGGTCGAAACCGGTTTTGCCGGCACCTCCGTCTTTGAAAATGGCCGAGTTGGACTTGAATGGGAGGCCGCTCTCGCTGAAGCTGAGGTTGCCGGAGTCGGAGGAACTGTCGCCGGTGACTTTTGAGCTTGTCTAG


Promoter Sequence:
>Vu_04874::LG1:70590806-70592806(-)
CAGAGTAGTGGTACCATCAATAAATTGAACCTTGTTCTTGGCATTCAAGGCTGTGTACATTGATTTGCTCCAAGCATGGTAGTTATTGAATTCTAGGAGAGGGGAAACAAGGGAAATCGCATGGCTTTCACTTAGAGGGAGATACAAGAGACTGAAAGAGTGGTTATGTTCCTCCGTCATCGTGCAAGATCCTGTAAAAGAATAGACAAAGAGAAGAAAAAAGGAATAAAGAAAAGAAAGAAGAGAGAAAGGAAAAGAAAAAGGGTTAGAGGCACAACAGAGCTCTTCCAAGGAAGAGCTTTGATACCATCACGGAAGAGCGGCAAATGAGGCTCTTAATAGATCATGTCTATGTAATAGGTGATCTATGAGAAAGAACTTTCTACACATTGTTATTATGTGAGTGTAAATTGTATTGTACATTATGAAAGTAAAAGAGTACCTATATATATATATATATATATATATATATATAACGTAACAGAGAAGTAAATAAAAACAGGATAGGAATTATAGAGGAGGATTTTGACAGTTATAGCATTTGACCATTAATTCTCATTCCATACAATACTCTCCCATGGATATGTATGATGAATGTCCATATAGATTTCTTATAGTAGAGTTGAAAAAGTTATGGGAAAAAAGATATTGAAAATATTATGCTTAAACAAATGAAGTGTTCATTATACAAGTTTATTATAGATTATTGGTGATTTTTTTGTATTGAGATGCTTTTGTAATAAAACACTTATTGTAGTGTAACTTATTCTTATATTTTGATACAATTTCATTTTGTCTTCTATCTAATAACAAATGGTGTTTTATGAGTTATCAACAAATTTTGTCTAGAGGACACACATTTTGTTTTAAATTTAACAATTTTTTAAAATTAAAACATTTATATACACTAAAATGGTAAAAGTTATCTACATTTGTTTTTATAATTATAATAATACTTTTATTATCGTAAAAACGGTGTGGATACATACTTTGGATAATGATTTTAAAGATTGATCTTAATCACAAAAGTCCTTTTAAAAATGTGTGTAAAAGATGTAATGTATTATTTACATAATTACTATAATGTAAATAATTATCCGAAAAAGTTCCGCGCCACGCACAATATTGGACGTGTATAAAGACTAATAAAATTAAATAGATATCAAAACAATATAAAAGAGATAGAGAAAAAAGTAACACGGAAGATAGAAAAAAGAAGAAGAAGAAATAATTGCAAAAATTAGAGTGTTTGTAACCAAATCAAATCTAATAATTTTTATTGGATTAGATTTCAAAAATCTAAATCTTCTCGAATGAAGAGAGATTAGAGAAGACTAATTTAAATATTTTTAATAAGAATGTTTTAACCTAATCAAATCTAATAAGTGGAATTGAAAGGAAAATTATTGGATTAGATATTAAAAATTTAATCTGATTCAAACCTACATATACACACATAACAAGTCAACTCTGATAAATAAAATAAAATAAATAAATGCTAGAAAAAAAGACATAAAATAAAATAAACAATATGAGAAAAAAAAAACTAAAAATAAAGTTTTTCATTTAAAGATAAATAATATAAAATGAAAAAAAATATTTCCAAAATAATAAATAAAGAAATTACAGTAAACTAATTACAAAACTATTCATATTGCGAAGGAATATTAAAAAGGACTAAATTTATAAAATATCACTTTCTTTTATATTTTATTTAAATATATGTATATATACAATATCCAATAGGAATACGACAGTTTTCTATTTTTTATTATCGTAACGAATATTTATACAGCACACAAAATAAAGAATATATGTTAATCTTGGAAAATAAGATTGGCCAATGACAGTGAGTGTAGTAGTATCTGACAAATAAGCACGTGAAGAAGGAGGAGAAACAAATCCACCCGCTTAGTTTTCTGTCTCATCTCACTCCTTTTATTACAAAACAAAACACAAACTCTCCATCATCCTCTTGCATGAACCAAACCAAATCCAAA


Gene Sequence:
>Vu_04874(-)
ATGTGTACGGCGGAGAAAGACGGGATCATGCTCTTCGGCGTGCGCCTCACCCTACCCGATAACAACCCCACCGTTTTCAGAAAGAGTGCCAGCATGAACAATCTCTCCCCAAACTCTGAATCGCCTCCGCCGCACCATCCCAATGCAGGCTACGCCTCTGAAGACGTCGTTCACCTCTGCCGTCGCACGCGCAAGCGAGGTGATCTATTAATTAATCCGTTATAATTAATATTTTTCGTTGATGTGTTTGTTTGGTTATCTCGAGAATGAATGATTGTGTTGAGATTAACGGATTAATTAGGGATTCCGTGGACGGAGGAGGAGCACAGGCAGTTCCTGTTGGGATTACAGAACGTTGGGAAAGGAGATTGGAGAGGAATTTCAAGAAACTTCGTCAAGACTCGAACGCCCACTCAGGTCGCTAGTCACGCTCAAAAGTATTTTCTCCGCCGTCACACTCACAATCGCCGCCGCCGGAGATCTAGTCTCTTCGATATCACCACCGACTCGGTATCCTTTTTATCGCACGCTTCTAATCTTAATTTAACTTTTACTAATTCCTTCTTTGAAAATTGAAACAATGAAGGTGAAGGAAGAGGAACAAGCGGTGCCGTCAGCTAGGTCGAAACCGGTTTTGCCGGCACCTCCGTCTTTGAAAATGGCCGAGTTGGACTTGAATGGGAGGCCGCTCTCGCTGAAGCTGAGGTTGCCGGAGTCGGAGGAACTGTCGCCGGTGACTTTTGAGCTTGTCTAG