Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_04850 LG1 70012644 70013647 PREDICTED: TMV resistance protein N-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 70012909 missense_variant p.Ser89Leu
C/A 70013013 missense_variant p.His124Asn
A/G 70013326 missense_variant p.Asp196Gly
G/A 70013334 missense_variant p.Ala199Thr
G/T 70013486 synonymous_variant p.Gly249Gly
A/T 70013543 missense_variant p.Glu268Asp

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_04850.1
MASFVPPLSPSLISKTPQQQVHQVFLSFRGEDTRYTFTSHLYAALRRLQVKTYIDNDLERGDEISPSLLKAIQDAKVSVVVFSQNYASSRWCLDELVKITQCKRNTGQIIVPIFYHVDPTHVRHQTGSYAHAFASHEKRFVADMNRVQTWRLALTEVANISGWDCLTTSVESELVEIIGKDILQKLESITGGGLERRIGLQKEMAQQKLEKLLRTGDVRDMEELITAMQQLGEVKLEKAMQTDDSGVWREVMETYERILQLKQDKWMRTLSTKDMQDLMSTRGHVMQIQREQSNRRMGFRGI*


CDS Sequence:
>Vu_04850.1
ATGGCATCATTTGTTCCTCCTCTTTCTCCATCTTTGATCTCCAAGACCCCTCAACAACAAGTGCATCAAGTTTTCCTTAGCTTTAGGGGTGAGGACACACGTTACACTTTCACCAGCCATCTTTACGCAGCATTAAGAAGGCTTCAGGTAAAAACTTACATTGACAACGATTTGGAACGAGGCGATGAGATATCACCCTCACTTCTTAAGGCAATCCAGGATGCAAAAGTCTCCGTCGTTGTTTTCTCCCAAAACTATGCTTCTTCACGCTGGTGCTTGGATGAGCTCGTCAAAATCACCCAATGTAAGAGGAACACTGGCCAAATCATAGTGCCTATTTTTTACCACGTTGACCCAACCCATGTTCGCCATCAAACTGGTTCCTATGCACACGCTTTCGCCTCGCACGAAAAACGTTTCGTTGCTGACATGAATAGGGTTCAAACGTGGCGGCTTGCACTCACTGAAGTAGCCAATATCTCTGGCTGGGATTGCTTGACCACAAGTGTGGAGTCTGAACTAGTAGAGATAATTGGTAAGGATATATTGCAAAAGTTGGAGTCCATCACAGGTGGTGGCCTAGAAAGACGCATTGGCTTGCAGAAGGAAATGGCACAGCAGAAACTGGAGAAGTTACTGAGAACGGGTGATGTGAGGGACATGGAAGAGTTGATCACGGCAATGCAGCAACTTGGAGAAGTGAAATTGGAGAAGGCGATGCAAACAGATGATTCGGGCGTTTGGAGGGAGGTTATGGAGACGTATGAGCGTATATTGCAGCTTAAACAGGACAAGTGGATGCGAACACTTAGTACAAAAGACATGCAGGATTTGATGAGTACGAGGGGGCATGTTATGCAGATTCAGAGAGAGCAATCCAACCGTAGGATGGGGTTCCGCGGTATATAG


Promoter Sequence:
>Vu_04850::LG1:70010644-70012644(+)
CACACCTATTTCCAAGGTCTTAAAGTCTTGTTGCAATGTTTATTATTTCAATAAGGTCCATGTACTTGTTGGTGTCTTAGCAAGAAACTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAACAATGTAATTGCTAGTATTTGTTAGTAGGAAGAATTGAACTCACAACCCCTCTCACCATCTCTTCCAAGTATATTGTCGTTCTTTTTTAAGTGATGCTTACAATATATGATGCTATGATAACATCAATAACAATTAAAATATTACATAAAATTGTGTACAATTATAATAACAATCTATAAATGCCTTATTATAGTGAATTTCAATAAATTCATAAATCAATTAATATATACATACTTAGCATCCTTATTCATGGTAATTCATAAATTATCATAAACTTAAAATTAAATAACTTTAAAATTTTGGTGAGTAACAAAATTTATCATACACTTAATTTCAAATAAATATCATTAATTTGGAATTAAATGAACATAAAAATTTGTCATTTGTCATTTCTCATTTTGGTGAGTAACAGATTCTCATACATCCATTTCCAAACAAATATGACATACACATACTATTAACCATACATAGAACTTTCATTTTTCTTATCTTACGTAAAAAAATTCATATATTTGCTTTATCTCTTTCTATCGTGCAAAACAAAAATTACCAATTTCATTATAACATTAAAGCAAAAAATTCAATCAATTTGCATCGGAAACATTAATCTTTATACAGGCAATCAAAATTACATAAATTTTTCATCTAATGAAACAATGTGAGCAGTAAAAACCTTAGAATCATAAGATAAAAAAAAAATATTTTTCATACCCATCAATGTAAAAACCTCATAAATTAAAAACCCCTAAATTTCATATTTGGGGTTTATAAAATTGGGAGAAAACATATAAAGAGAATCAAATAATTTCATAGAAAATTCAAATAGGATTTTAGAATTACAAAATTACGTGATTCTTACATATATTAAATAACATGTGTACCTTTCTCCATGAGAGATTATCCCCTATGGTGCTTTAGAGATTGAGATGGATCACCTCAATCCTTTCTTATGAGAAATTGCATTCTTCCCTATTCTATTAAAATCCAATTAAATTAATGATGATCCAAGGTTTCATTCCCTTTAATTCACTGTTCTATGATTTCTTATTATATAGATTGAGAAACACACATACTTGTTAGAGAGGGATTTTGTCTACGGATTATTTATCAGCCTGTCAATTTGTAGATATATTTTAGGACCATTGTAAATTATTGGCAAATTAATATGTAAGTAATTTATTTTTCATGCTTTATTTACATACAAAAAGTCGATAATAATGATTTCTGCGAGTCAAATTTTGACGGAGATGATTTTCATTCACAATGGTTTGTCAATCAAATAAGTTTTTTTATAGTGAATAGAAGGAAACTAAGGGATTGAGGTTAAGGCAGACTTAAGAGAAGCATCAAATCCATACTAACACATGCATTATGCCAACCTTTTTATCTTTTTTATTTCTTTATTTAGGTTCAAGGAAAAAGGAACATAAATTAATTTTGGACTATTAGACGAAACAATAATGCACAATCAACACGGTATTAGACGAAACACTAAAACCATTCATCCAATATTGCGTGCTGGTTTGAAAATGAATCACGCGGTTTTATGATTTCTCCATCCTTATCGAAACGAAATGTGCAAAAACGAAGAACTATGTTGGCTTTCATCACATTGCAACTCATGAACGTGGAGATGAAGTTGCTCACTTCACTTTCCAGCGTAAAATTTTGAATCAGAATGAACAAAGTCAAAAAAAAGAGAGGAAGCTTCCATTAAAATTCCACTTTAGCCACAGCCAAGGGTTAAATACATGAATCATAAGTTGATAGTTTTATTGAAACAGACATTTTCATTTTCATTGAAAACAGAGA


Gene Sequence:
>Vu_04850(+)
ATGGCATCATTTGTTCCTCCTCTTTCTCCATCTTTGATCTCCAAGACCCCTCAACAACAAGTGCATCAAGTTTTCCTTAGCTTTAGGGGTGAGGACACACGTTACACTTTCACCAGCCATCTTTACGCAGCATTAAGAAGGCTTCAGGTAAAAACTTACATTGACAACGATTTGGAACGAGGCGATGAGATATCACCCTCACTTCTTAAGGCAATCCAGGATGCAAAAGTCTCCGTCGTTGTTTTCTCCCAAAACTATGCTTCTTCACGCTGGTGCTTGGATGAGCTCGTCAAAATCACCCAATGTAAGAGGAACACTGGCCAAATCATAGTGCCTATTTTTTACCACGTTGACCCAACCCATGTTCGCCATCAAACTGGTTCCTATGCACACGCTTTCGCCTCGCACGAAAAACGTTTCGTTGCTGACATGAATAGGGTTCAAACGTGGCGGCTTGCACTCACTGAAGTAGCCAATATCTCTGGCTGGGATTGCTTGACCACAAGGTAAAACACCACATCTTGCTTCTGGGTAGCTTTCTATTCCTGTAAGATGTTTCCCTGTTTTAATTGCAATACTTTATTGAAATTGATGAGCACAGTGTGGAGTCTGAACTAGTAGAGATAATTGGTAAGGATATATTGCAAAAGTTGGAGTCCATCACAGGTGGTGGCCTAGAAAGACGCATTGGCTTGCAGAAGGAAATGGCACAGCAGAAACTGGAGAAGTTACTGAGAACGGGTGATGTGAGGGACATGGAAGAGTTGATCACGGCAATGCAGCAACTTGGAGAAGTGAAATTGGAGAAGGCGATGCAAACAGATGATTCGGGCGTTTGGAGGGAGGTTATGGAGACGTATGAGCGTATATTGCAGCTTAAACAGGACAAGTGGATGCGAACACTTAGTACAAAAGACATGCAGGATTTGATGAGTACGAGGGGGCATGTTATGCAGATTCAGAGAGAGCAATCCAACCGTAGGATGGGGTTCCGCGGTATATAG