Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_04805 LG1 69212093 69212927 PREDICTED: transcription factor PRE6-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, response to light stimulus, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus
Molecular Function   enables   protein dimerization activity
SNP Position Effect Amino acid change
T/A 69212294 intron_variant
T/A,* 69212674 intron_variant
A/T,* 69212675 intron_variant
T/A 69212859 missense_variant p.Ser72Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_04805.1
MSTRRSRSRQTPVSTQITDAQITDLVSKLQHLIPELRARRSDKVSASKVLQETCNYIKSLHREVDDLSDRLSQLLATTDSNSAQAAIIRSLLM*


CDS Sequence:
>Vu_04805.1
ATGTCTACCAGAAGATCTCGTTCCAGACAAACGCCAGTTTCCACTCAGATCACTGATGCTCAGATCACTGATCTCGTTTCCAAGTTACAGCACCTTATCCCTGAGCTTCGCGCAAGACGTTCCGACAAGGTTTCGGCTTCTAAGGTGTTGCAGGAGACTTGCAACTACATAAAAAGCTTGCACAGAGAGGTTGATGACCTAAGTGACCGGTTGTCACAACTTCTGGCCACCACAGACTCCAACAGTGCCCAAGCAGCCATTATTAGGAGCTTACTTATGTAA


Promoter Sequence:
>Vu_04805::LG1:69210093-69212093(+)
TAAAATTGATTTGTTATGATTCCCACATTTTGGCTTGAAATTTTGAATATTAGTGACTTGAATTAGATTGGTATATTTAGCAATAGATACTAGTGTAGTATTTTCTTTAACCTACACAATGATGACTTTTAGTCTATTTTCGTGTTTTTTTGTTTATTCTCTTTCGATGACTGCTTTTCTATGCGCAATGTATGACATACTATTTATTTATACGAATATAAAGTATTTAAATTATATTTGTCATAAGCAATTTATTTCAAAACAAAAATATCTTCATTATTCAGAAAAATTGGGCAATATTTTTTTTTGAAGATAATATTATCATATGGATCATGTGATTGGAACCACAGCCACATGAACACAATACACAACATTTCTCTTTCAAACTCTTATTATTTTTCTCTTTTACCAGTGACGTATAAATATTTTTCTGGATAAGAAATAACCATTTAAAAAATTTAAACTACTGAGATAAAATTTTATTTAGTGGTCTGAAACGGAAGTCTTATATTTTTGTTACTCGTAGCATTTCTACATATATGGTTATAAAACATCTCTCCTTGAGGATATTTATTGTGTGTACCAATAAAAATTGGAAATTCCAAATACCGAAAAACAATTATATTTTATTTGGAATGCCTAAACTTCACTTTCAAGTAGTGTCTTTTTTCTATCCTTTCCAATGGACAAAAGTTCTATAAGCCACCTTTGCCTACACCACTCACTAGAAGTTTACTACTACGGATTAATCTTGGTTGGGACCAGCATTTCTTAAAAACCATATCTTCCTTTCCATAACTAACTTCTTTCTTACTTCCAACAATGTTTATCCATAAATCTAAAACATTTTTGTTTGCATGTTGTCTAAACAATCTGCTTAGCTATTGGAAGTTTATGAACAGAAAAAAAAATTGTTAACTTCCAGAAATCATTCCTGTCTTTTTCAATTTCTAACGAATCGATATCGGTTGTATGAATAAATAAACAAACATGTGTGGATAATTTTTTTCATAAAATATAAAATAAGTTTAGTTTACATTGTAATGTTTTCCTTACTTTTAAAATACTTTTTTTAATTTAATATAAGAGAATATTAATTTATTCTTAGAGAAAAAATGTTGTAAAAGGAAGTTTTTACAATATAGTTATCTGAGAAGTGATAAAAAGGGTTTTTTTTTTGTTTGTATTGAGCAGTGATTTTTACATTGAAAAAGGGAGATTTGATCCCTAAAATTTCTCTGGGAAGTGGCCTACTAGATTGAAAGAAGAGTGGTTACTGGTTTGTTCTTAAGTTAAGTTTGAAAGGAAAAAGAAAGGAAAGTGAAATGATTAAAATGACAAGGGAGTAATAACATAACATGGGGTTGTGTGCTAAGACTGACACACAGAGGTCCCGCGTAGTTGGGTGAACAAGCACACTTCAACTCTAACCCCAGGAATGATATTTTTTAAATAAATATATAATTTAAAAATAAAAACGTAAGATAAGGAGAATTTATAATTTGATTAAAAAGATAGTTAATTATGAAAATATAATTATTCGACCAACACACATAACATAACCCTATTTAACAACATCCCCACCCTCGATGCCTTTCCCATGCAGTTGTCCTCTTCAACTTCCAACACCCACTGACACATTCTCTCACTCATACTTCTCTCTCTTGATACTTTTCATCTCGCAAACTCAACTGAAACAACAGCTGTTTTCGCCCTTTTCTATATACCTACCTACCAAGCTTCCTTTTCTTACTCTGACAAATTCGCTTCCTATTCCTCCCATTTCTGAGGCACCCCAAGAACTACTAGCTGCCTCCTCTACCCTAGCTAGCTTAGTAGTTAGTAGTTGAGCTTAGTTAGTACTACTTCTCACTTCTCACTTCTCACTTCTCACTCTCACGTTATCTATATATCTATCTACCTCTTTCTTTAACTTATCATCACCAAATCAACCACTATTTCTGACACACCCATCATTCACACTACTCTTTAATTAACAA


Gene Sequence:
>Vu_04805(+)
ATGTCTACCAGAAGATCTCGTTCCAGACAAACGCCAGTTTCCACTCAGATCACTGATGCTCAGATCACTGATCTCGTTTCCAAGTTACAGCACCTTATCCCTGAGCTTCGCGCAAGACGTTCCGACAAGGTACTAATCTTATAATTTATACACTTAACTTCTCTTCTCTTCTCTTCTCTTCTCTCTCATTTCTACTTTCTTTTTATCTTTTTTTTTAATTTTACAATTCTATAATTATTACGTCATTTCTTTAACTTTCTCTCTCATTTTTTTCTACTTATACTTTTTTCCTCCTCTCCTGCACCCTGATTAATAGAGAGATGTACATAAGCATTTTTATAATAATAATAATAATAATAATAATAATAGTGGTTTTTCTTATTTAGTTGCTATCTCTTTCACCGTTCTCTCTCTAACACGAACAAGTCACATGCAGAAGACACAAAAACACAGATTTTCTGTGGCTTTGGTTGGCCGTGCTAGATAAGTCACGCGTGTGTCCTCCCATTAATGTTATTTTACCCACAACTTGTGAGGGTGTGGGACGTGGATATTCCCTCTTGCCATCATTGACTATATATTATATATATATATATATATATATATATATATATTCTTAGTATATGGAAAAATGTGGCAAATAATGAAATTAGTTTGTATAATTATTTTGGTTCTTGTGTAGGTTTCGGCTTCTAAGGTGTTGCAGGAGACTTGCAACTACATAAAAAGCTTGCACAGAGAGGTTGATGACCTAAGTGACCGGTTGTCACAACTTCTGGCCACCACAGACTCCAACAGTGCCCAAGCAGCCATTATTAGGAGCTTACTTATGTAA