Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_04758 LG1 68321931 68323402 PREDICTED: myb family transcription factor PHL8-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity
SNP Position Effect Amino acid change
G/T 68322170 synonymous_variant p.Gly45Gly
A/G 68322199 missense_variant p.Gln55Arg
T/A 68322338 missense_variant p.Ile75Asn
G/A 68322897 missense_variant p.Gly161Asp
T/C 68322907 synonymous_variant p.Leu164Leu
G/T 68323032 missense_variant p.Gly206Val
G/A 68323216 synonymous_variant p.Lys267Lys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_04758.1
MRLVLSTDAKPRLKWTPELHQRFTEAINQLGGAEKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKNSPPETCSDIKQQGFSDIQSSDVRCSREISIRTQNQMNESLKIAEALQMQMEVQRKLYEQIEVQRHLQLRIEAQGKYLQSVLSKAHETLARYDSSTTGIELAKSELSQLVSIINNACPTSPISELTETRGLSLNCGEMKQDRGTMCSLESSLTSSESSGRTEVRQALDEAEKPQKTNGISVELPLMEIHQEGTAFKGDTSEWRKRSAATDSSGCCVDQPCGKKCGNKLRKCELSDMLDLNSQYERDIDSSVKEIDLNCSSSFWGQ*


CDS Sequence:
>Vu_04758.1
ATGCGTTTGGTTCTGTCTACTGATGCAAAGCCTAGGCTGAAATGGACTCCTGAGCTTCACCAACGCTTCACAGAGGCTATCAATCAACTTGGAGGTGCAGAAAAGGCAACTCCTAAGAGCCTTATGAGAGTGATGGGGATTCCAGGACTAACATTGTACCACCTCAAGAGCCATTTACAGAAATATAGGCTTGGGAAAAACTCACCGCCAGAAACCTGCTCTGACATCAAGCAACAAGGTTTCAGTGACATCCAGAGTAGTGATGTTCGTTGCAGCAGGGAAATCAGCATTAGAACCCAGAATCAGATGAATGAAAGCTTGAAGATTGCTGAGGCTCTCCAAATGCAAATGGAAGTACAGAGGAAACTTTATGAACAAATTGAGGTCCAAAGACATTTGCAGCTTCGAATCGAGGCTCAAGGGAAGTACTTACAATCAGTTCTATCAAAGGCACACGAAACACTTGCAAGATACGATTCTTCCACAACGGGCATAGAACTTGCAAAATCTGAACTTTCTCAGTTAGTGTCAATAATCAACAATGCGTGTCCAACCTCTCCCATTTCAGAACTTACAGAAACAAGAGGGCTGAGTCTGAACTGTGGAGAGATGAAACAAGACAGAGGAACCATGTGCTCACTTGAAAGTTCTTTGACATCATCTGAAAGCTCTGGGAGAACAGAAGTAAGACAAGCACTAGATGAGGCAGAGAAACCTCAAAAGACTAATGGTATTTCAGTTGAATTGCCATTGATGGAGATTCACCAAGAAGGTACAGCATTCAAAGGAGATACAAGTGAATGGAGAAAGAGAAGTGCAGCAACCGATTCCTCTGGTTGCTGTGTCGATCAACCTTGTGGGAAAAAATGTGGCAACAAGTTGAGGAAATGTGAACTGTCAGATATGCTTGACTTGAACAGCCAATATGAGAGAGACATTGACTCAAGTGTGAAAGAAATAGATTTAAATTGCAGTTCAAGCTTTTGGGGACAATAA


Promoter Sequence:
>Vu_04758::LG1:68319931-68321931(+)
ACTTCTCTTCTTTTTTTACTATAACTACCCACGTTCAAGAAGAATAAAACTATCATAAATAATATCCTTTTCAAATATTTAATATAAATTTATATCTAAAGGTTGACTTAAGTTCAAAGTGAGAAAACTTAGTGCTGCTCGAGCTCTTTGTTAGGATATATATATATATATATATATATATATATATATATATATATATATATATGAGTTTAAGTTATATATTGATTAAAAATAAAAAAGTTGAATAATATTTAAGATAAAAGAACCATAAATTTGTTAACTTAAAAGATTTTAAAGTAAAGTGATGTCTATATTTTATAAGAGTTGGTCTTATCTTTCGTGTTGTATCTTTACGATGAATTCTCTAAAATAAAACTTATCGGTAGTATTATAGTCAATAATTTATCTTGACAACCTACTTATCGTGATGATCGATTTAGAGAAATTTTTGTGTTAAAGGTTTTCCATCCAAAGACCCATGACCCTTTATATATAAAAAAGAAAAAGAAAAAGTTATTGTAGAGGTTAAAAATATGTGGGAATAATTGAGCAGATGAGGCAGAATAGCAGGGAATCCATGGTGCTGAATTGGCAGGGTTTTGAAGAACCAATCATTGGATTTTGATTCTATTGATGAAACTCCAAACCGCAACCCAAGAAATTTGAGGAGTGACTTGATCGAATTGGCTTTTGAAGATTTGTTGTTGGCCATTATAGTGTTCCTTTTTCTTTTTCTTCTTTTATTTTTGGTGAAAAATTGTTTTCTACTCTTGTGCTTGATATAGATTACAGCATTAAAGCAGATATTCTCTTTGGAATAATTTCTTTACGAGACTTTATTCCGAGTGAGCCCTGTAGATTGCTTTCGTATTAAAAGAAAGTGCACGGTCACATATTCAGTGACTTCGTAACATCTCATATTAACGGGTATTATTACACTCACATTAAATTTCATTAATCATGTTTTAGTCCAATCCCATCATCATCGTCTTTACACTGTAGGGTTAACCTAATGATTAGTATGTGGTTAGTGGTTAGTGGTTAGTGGTTAGTTAAAATAGGGTTCCTTTATGAACTTTGGGGTGGAAAATGTTTGGTAGGATAACATAAGAAATTATGAACTGTTGAATGTCACGAATGGACACATTAATTTGATAAGAGGGGTACGGCATCATCTCTTGACACGGTTGATTAGTTCTCTTTTTTTAGTGTGTTTTCTTTATAAAGAACACGGACGCTATGGGTCCATAAATCTAATCCTAGATTCTTTGATTCCTCCATCCCTACAAGGAACAAAAAGAATCTGCCAATCGCATTAATCAAACTTCTCATAAAAGAAAACCCAAAATTAAAGTTGTTAGAAAGGGAAAATGAAATTTTAAAGAAAGATTGATTAATTTAGTTTTCCCTTTCAATCATCACAAGCAAGCAACAAAATATCCATAATACCATTCCCACATAATTTTCTATGACTATGTTTTACCTGAAAGCTTCTCACAGCATTCAGAAAGTTGCACCCATTATTCATCATGGTGGGGCCTATTCAGTTCCTTAGGGAATCAACCTCAAGGAGAGATTAAGTAGGAAAACAGCAAGATAAAAACAAACCATACACTTTTCCTCTTTTCTCTCCTTTTAAGACTCAGAATTGAGCTGTTTTCCTTCTCTTTTTTTTTTTTTTTTGCTGAATCAGAGATTCTCTCCACCCCTTTCAAAGTCAAAGAAGGAAGGGTAGAGAGAAAAATTAAAAAAAAAAAGAAAAGTGGGTATGAAATGGGATGAGATGAGAGAGGAAGAGCCTCAGCTTATGGCATATATTCCGCCAACATATCCCCATTTATGCTTCCTTATATGGCAGTGAGATCATACAGCATCTCAACTACTACCAATTTATAAGGAGAACTACAGTCTATAGCTCAAAGCATCAAAAGTATATATATGTTTCAGTAACACTACCACAAAAAGCAAAATGGATCTGCAAAATGTGGAAAATCGAACCA


Gene Sequence:
>Vu_04758(+)
ATGCGTTTGGTTCTGTCTACTGATGCAAAGCCTAGGCTGAAATGGACTCCTGAGCTTCACCAACGCTTCACAGAGGCTATCAATCAACTTGGAGGTGCAGAAAGTGAGTACAATACACACTTTAACACCTTTACTATTTTCATATATTACACTTTATGTTATATCTTGGCTAGTGTAACAATTATTCACTCTATGACATGTGGCAGAGGCAACTCCTAAGAGCCTTATGAGAGTGATGGGGATTCCAGGACTAACATTGTACCACCTCAAGAGCCATTTACAGGTATTTCCAATTTTGAATGATTATATCATTATTTGTTTCTTTCACTGAATCCAAAAAATCATGAGTACATGGTTGCAGAAATATAGGCTTGGGAAAAACTCACCGCCAGAAACCTGCTCTGACATCAAGCAACAAGGTAACTTATACTGTGTTAGATTTGATTAAGCAGTAATGGCATGACTGGTTGTTTTCCATTTGGCTTTGGCTTAACCTTGATGCTCTTCGTGATGCAGGTTTCAGTGACATCCAGAGTAGTGATGTTCGTTGCAGCAGGGAAATCAGCATTAGAACCCAGAATCAGATGAATGAGTAATACTTACTAACTGAACAAATATTTGAATGCCTTTAGTTGATGTTGCATGTGAACAGTTAGGCCTAGAATTTTCGTTGACCAGATGCTGTGTTTAGCAGAAGCTTGAAGATTGCTGAGGCTCTCCAAATGCAAATGGAAGTACAGAGGAAACTTTATGAACAAATTGAGGTAGCATGAGCAGATAATATTGTCTAAATTCTTCTCCTTTCTGAATTCTAGCTTTTTGCATAAGGTCATGTTACCAGGTTTGGATCATGTTTTTAGGTCCAAAGACATTTGCAGCTTCGAATCGAGGCTCAAGGGAAGTACTTACAATCAGTTCTATCAAAGGCACACGAAACACTTGCAAGATACGATTCTTCCACAACGGGCATAGAACTTGCAAAATCTGAACTTTCTCAGTTAGTGTCAATAATCAACAATGCGTGTCCAACCTCTCCCATTTCAGAACTTACAGAAACAAGAGGGCTGAGTCTGAACTGTGGAGAGATGAAACAAGACAGAGGAACCATGTGCTCACTTGAAAGTTCTTTGACATCATCTGAAAGCTCTGGGAGAACAGAAGTAAGACAAGCACTAGATGAGGCAGAGAAACCTCAAAAGACTAATGGTATTTCAGTTGAATTGCCATTGATGGAGATTCACCAAGAAGGTACAGCATTCAAAGGAGATACAAGTGAATGGAGAAAGAGAAGTGCAGCAACCGATTCCTCTGGTTGCTGTGTCGATCAACCTTGTGGGAAAAAATGTGGCAACAAGTTGAGGAAATGTGAACTGTCAGATATGCTTGACTTGAACAGCCAATATGAGAGAGACATTGACTCAAGTGTGAAAGAAATAGATTTAAATTGCAGTTCAAGCTTTTGGGGACAATAA