Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_04728 LG1 67677607 67679182 PREDICTED: ethylene-responsive transcription factor ERF088-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
A/T 67677707 downstream_gene_variant
G/A 67677747 downstream_gene_variant
A/T 67677752 downstream_gene_variant
A/T 67678019 downstream_gene_variant
G/C 67678024 downstream_gene_variant
C/T 67678075 downstream_gene_variant
C/T 67678174 downstream_gene_variant
T/C 67678332 missense_variant p.Glu284Gly
C/A 67678349 missense_variant p.Met278Ile
C/G 67678403 missense_variant p.Glu260Asp
A/C 67678494 missense_variant p.Val230Gly
G/T 67678578 missense_variant p.Ser202Tyr
T/A 67678650 missense_variant p.Tyr178Phe
G/T 67678769 synonymous_variant p.Ser138Ser
G/A 67678845 missense_variant p.Ser113Phe
A/T 67678849 missense_variant p.Ser112Thr
A/C 67679120 missense_variant p.Ser21Arg
C/A 67679133 missense_variant p.Gly17Val
C/A 67679147 missense_variant p.Trp12Cys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_04728.1
MKGKMANKRKRWECEGGEKKSEEGKTEWEKLREEAASMAAAILGARRANKRYIGVRQRPSGRWVAEIKDTIQNIRLWLGTYDNAEDAARAYDEAARLLRGANTRTNFFPSQSSPYVSALPPKIAKLLFHRLKARNFESCTRFPSNHYDQETKVEPQPQSQPQPEPEPKLYLQTEEPHYENFVDMEVNGIVEESYHGASYSSSAMTTCDYSCGTNEDDCNQKGSGEDFSFVYNFAENVYDEEKKIVSGKGEFEGCDFQFLESGGSLSYSFCPFEIAEEMVGAIEENKYYDVDDSALGRETFMMKYEPS*


CDS Sequence:
>Vu_04728.1
ATGAAGGGGAAAATGGCAAACAAGAGAAAAAGATGGGAATGTGAAGGAGGGGAAAAGAAGAGTGAAGAAGGGAAGACAGAATGGGAAAAACTGAGGGAAGAAGCAGCTTCAATGGCTGCTGCTATTCTTGGAGCTAGAAGAGCTAACAAACGTTACATTGGGGTGAGACAAAGACCCTCAGGGCGATGGGTGGCTGAAATCAAAGACACCATTCAGAACATTAGACTTTGGTTAGGCACTTACGACAATGCTGAAGATGCTGCAAGAGCTTATGATGAAGCAGCACGTTTGCTTCGTGGTGCCAACACTCGCACAAACTTCTTTCCTTCCCAATCTTCTCCTTATGTTTCTGCTCTTCCTCCAAAGATTGCCAAACTCCTCTTTCATAGACTCAAAGCTAGAAACTTTGAATCCTGTACTCGTTTTCCGAGTAACCACTATGATCAAGAAACCAAAGTAGAACCTCAACCTCAATCTCAGCCTCAACCAGAACCAGAACCTAAATTATATCTCCAAACAGAAGAACCCCACTACGAGAATTTTGTAGACATGGAAGTAAATGGGATTGTTGAAGAAAGTTATCATGGTGCTAGTTATAGTTCTTCTGCCATGACTACTTGTGACTATAGCTGTGGAACTAATGAAGACGATTGTAACCAGAAGGGTAGCGGGGAAGATTTCAGCTTCGTTTATAATTTTGCTGAGAATGTTTATGATGAAGAGAAGAAGATTGTGAGTGGTAAAGGAGAGTTTGAAGGTTGTGATTTTCAGTTTTTGGAGTCTGGTGGATCACTGAGTTACTCTTTTTGTCCGTTTGAGATAGCAGAAGAGATGGTGGGAGCGATAGAGGAAAACAAATATTACGATGTTGATGATTCAGCGTTAGGCAGAGAAACTTTTATGATGAAGTATGAACCAAGCTAG


Promoter Sequence:
>Vu_04728::LG1:67679182-67681182(-)
AAGGAACATAACAGCTCAAGGCAAGAACACTATGTCGTCATGTTTTAATTTTTCTTGTACACAATATTTTAGGTCTTTTTATATGATTGAAGCACTCTAAGTTACATAACTTTGTCTTGATGATTAAAAACCAATTGATTATAATGAAAAAGATTAATTATTTTTACAAATAATGTAATATACTAAATTAACTTAACACAATAAACAAAAGCATTAGAAAGAAAAAAAAAATAGAAGTAATATTCAAGACTGTAATGATATGTTTGAGTTAAATTTGTAAGAAAAAGGGTACCAATTATGTAAATATTTATAAAAATATAATAAAAGATGAAGACATTGTGTGTATATATACAATCCATGTTTATATATTTTTTTTATTTCAAACTTATTAAACTAGTGAATATTTATTATAAATGAAAATTTTAACTTCTCCTAAATCTGAAAAAAACTATTAAACATTAACATAACTCAAATTTGAAACGCAAAAAAAAAAATTAATGTAATTTTTTATAAAATGTAATTTTAAATTGAAGATGCAAAGCTGAGGAATATATAACCAGGTGATTTTTTTTTATTTTTTTTATCAGCAATAGAACCGTGTGATATTAGAGTACCAACAAGTGAATATCATCGATCGTGAGACAGATCATAAACTCTTTTAAATATTGTAACATGCAAGCAAACTTTAATAGGACTAACGTTTCTTTGTGTAAATTTAAAAAAAAAATGTTATTACCACATTTTAAAATTATTTACTAAAAATAAACCACCATTTGCAAGATAAACAAGAATGTGTGCTTATATATAAGGAGTATTTTTTTTTATCTATTTATTTTATTTTTACAAGTTACTGTTTTATTTAAATTTAATTGATTTTTAAATTTAACTACGTTTTTAATTTAATTACTTTTTTTAAATCTAATATATAAAAGTCATATACTAAATAAATAAAAATTATCTATAATTAAATTGTAAAAATTAATTATATTTATTTTTATATCTATAATTTATTTTTTTTTTGTAAAAAAGTAACACATGCATATAGTTTCACTTGTATAATTAATAAATACGAAAACAGATTTGAGTTTATCTCATCGTACAAGTATCAATCTAAGGCATATGCTTTTGTGACTGATGTAAAAGGTGATTTCTACAAGGTTTTTGACATTGACAAAAGCTATACACATGCCGGAAACTAATCTTAATTTATCGAACAAACTCCAACACACAAATCTGTTTTATAAAAAAAAAAAGATTTTATATTAATTATGAAGAATATGATTTATAAAAAAAAAAAGATTTTATATTAATTATGAAGAAAGTTCGATTATACGAGATATAATGCTTATTTGTGGATATTGATTTTGTGAGATTAAATTAAGTATAAGTTTATTTACTAATATGATTAAAAATTAGTAAGAGTTTCTCTCAATTAGGTCTTTTCTAAAAATTTCAATAGTTTTTTCTAAAAAACTTCAATAGTTTTTTCTTTCTTTCTTAAATTTTTTTCTATTTTTTTTCTCTCAGAGAATCTTAATCTAATTCGTGTCTAAACACTTCACCATATTGTTCACATAAAAAGGAGTGAAAAAAATTCTAACTCTTGAAATCCAGAATCTCTAGTTGCTATGTAACCATGCAATAATAATATTCATTTTCCAATAAATTCTATGATTTCAGCTTAAAACAAAGGTAGATAATTAGTGAGTTCAAGCAAGATATACTAAGCCAAAATGAAAAAGCCAGATTCATTGTGAAATACGTCTTGTAATCTCCCCCAGAATGAAAGCGAAATATGTACGGTACCAAGGTTTGTTTTTTAAGTAAAAAACAAGTTAAGAAAGAAAGCCGATTCATAGTTGGAACAAAAGGAAGCAACAAGCATTTGAGATTCCAAATATCTCACTTTCAACTAAACAGCTTCTGCAATCACTTGGCTATAAATGCGTGCACTGGCCAATGCTGCAATGCACTACCGATCGAACGTAAAAGAAAGCATC


Gene Sequence:
>Vu_04728(-)
ATGAAGGGGAAAATGGCAAACAAGAGAAAAAGATGGGAATGTGAAGGAGGGGAAAAGAAGAGTGAAGAAGGGAAGACAGAATGGGAAAAACTGAGGGAAGAAGCAGCTTCAATGGCTGCTGCTATTCTTGGAGCTAGAAGAGCTAACAAACGTTACATTGGGGTGAGACAAAGACCCTCAGGGCGATGGGTGGCTGAAATCAAAGACACCATTCAGAACATTAGACTTTGGTTAGGCACTTACGACAATGCTGAAGATGCTGCAAGAGCTTATGATGAAGCAGCACGTTTGCTTCGTGGTGCCAACACTCGCACAAACTTCTTTCCTTCCCAATCTTCTCCTTATGTTTCTGCTCTTCCTCCAAAGATTGCCAAACTCCTCTTTCATAGACTCAAAGCTAGAAACTTTGAATCCTGTACTCGTTTTCCGAGTAACCACTATGATCAAGAAACCAAAGTAGAACCTCAACCTCAATCTCAGCCTCAACCAGAACCAGAACCTAAATTATATCTCCAAACAGAAGAACCCCACTACGAGAATTTTGTAGACATGGAAGTAAATGGGATTGTTGAAGAAAGTTATCATGGTGCTAGTTATAGTTCTTCTGCCATGACTACTTGTGACTATAGCTGTGGAACTAATGAAGACGATTGTAACCAGAAGGGTAGCGGGGAAGATTTCAGCTTCGTTTATAATTTTGCTGAGAATGTTTATGATGAAGAGAAGAAGATTGTGAGTGGTAAAGGAGAGTTTGAAGGTTGTGATTTTCAGTTTTTGGAGTCTGGTGGATCACTGAGTTACTCTTTTTGTCCGTTTGAGATAGCAGAAGAGATGGTGGGAGCGATAGAGGAAAACAAATATTACGATGTTGATGATTCAGCGTTAGGCAGAGAAACTTTTATGATGAAGTATGAACGTAAATTCTCTGCTTGTTTTTACACCTTAACAGGGGTGTCTGAGTGTTTGAGGCTACAAGTTGGACAAGAAAATGGAAAGGAATTGGAAAAGGAAAATGTTATTTGGACAACAAAAATTTGACACAATTTTGACAACGGCGACGTGGCAGCTGTGCATTGGCTCAGTGAACCGGGGTGAGGGGTATTTTGGGTTTTTTCTGGTTTGTTTTCAATTCACTGAGCCAATGCACAGCTGCCACGTCGCCGTTGTCAAAATTGTGTCAAACTTTTGTTGTCCAAATAACATTTTCCATTGGAAAATTTTTTAGGATGGTAACTCTGACGTTAGACCTAGTGAGGAACAATATTTTCTTCCACTCATTTCGGACCTCATTTTTTTATTTTCATTCTTGCTTCAAAGAAAATAAAATTGGAGTAGAATTCATATTCTTTTAATCTTGTACTATTGAGATGGGTCTAACCCATATTCTTTAATTTCATTACAAATAAAGCTAATTCAGTTTTGTGACATGATAAGGCTTTTGTTCTGTACTTTATGTCAAATTGAGTAAATAATAATAAAAAAAAACTAGTATCAGTAAATTGTGAATTACAATTTAAAGTGAATGTTCTTGGATTTTGTGAATCATTCTTCGTTGTTCTTCAATTCAGCAAGCTAG