Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_04257 LG1 58528950 58530524 PREDICTED: probable WRKY transcription factor 71
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 58528984 missense_variant p.Asp12Gly
G/A 58529169 missense_variant p.Asp74Asn
A/T 58529173 missense_variant p.Tyr75Phe
C/G 58529267 missense_variant p.Asp106Glu
G/T 58529413 intron_variant
G/T 58529591 missense_variant p.Arg139Met
T/C 58529601 synonymous_variant p.Gly142Gly
A/T 58529731 intron_variant
C/A 58529964 intron_variant
A/G 58529965 intron_variant
T/A 58529972 intron_variant
C/T 58530248 missense_variant p.Ser200Phe
A/T 58530366 synonymous_variant p.Pro239Pro
G/C 58530367 missense_variant p.Ala240Pro
T/A 58530383 missense_variant p.Leu245Gln
G/T 58530458 missense_variant p.Arg270Leu
A/T 58530488 missense_variant p.His280Leu
C/T 58530491 missense_variant p.Pro281Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_04257.1
MSVEPKELYYQDLVLDHNNHHGTVAAAAGVGGGSDMYQKHFSTSLIPAASTPYDSQPFDPSYMTFTECLQGGMDYNSLATSFGLSPSSSEVFSSVEGNHKPAEGGDGGGATAATETLATLNSSISSSNKDKKKGEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRGNAAAGMFTPSLLATPTPLAAGSNFPQDLFLHMHHQHHHHHHHPHHHFHNTLFSTQSTNAVTTTSTTVTTASTPPSIYSSYNINNSLLHNQYLPSEYGLLQDIVPSIFHNKTHHQN*


CDS Sequence:
>Vu_04257.1
ATGTCTGTTGAACCTAAAGAACTTTACTACCAGGACCTTGTCCTAGACCACAACAATCACCACGGAACAGTAGCAGCAGCAGCAGGAGTAGGAGGAGGATCTGACATGTACCAAAAGCACTTTTCCACTTCCTTAATCCCTGCTGCTTCAACACCCTATGACTCACAACCCTTTGATCCCTCCTACATGACCTTCACCGAGTGTTTGCAAGGGGGCATGGATTACAATTCTCTTGCAACTTCCTTTGGCCTTTCTCCTTCCTCATCCGAGGTTTTCTCATCTGTTGAAGGCAACCACAAGCCTGCAGAAGGAGGAGACGGAGGAGGAGCCACTGCTGCCACTGAAACCCTTGCCACTCTTAACTCGTCTATCTCTTCTTCGAACAAGGATAAGAAGAAAGGAGAGAAGAAACAGAAGGAGCCAAGGTTTGCCTTCATGACCAAGAGTGAGGTTGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCTGTCAAGAATAGCCCTTATCCAAGAGGGAATGCGGCCGCAGGAATGTTCACACCTTCTTTGCTCGCCACACCAACTCCACTTGCAGCCGGGTCAAACTTCCCTCAAGATCTCTTCCTTCACATGCATCATCAGCATCACCACCACCACCACCACCCTCACCATCACTTTCACAACACCCTCTTCTCCACACAATCAACAAACGCCGTTACCACCACCAGCACCACCGTTACCACTGCTTCCACTCCTCCCTCCATTTACTCATCCTATAACATTAACAACTCTCTTCTTCACAACCAGTATCTTCCTTCGGAATATGGCCTCCTTCAAGACATAGTCCCATCCATCTTCCACAACAAGACACACCACCAGAATTAA


Promoter Sequence:
>Vu_04257::LG1:58526950-58528950(+)
AAAATAAAAGGTACCCTTTTTAGCAAGAGCAAAGTTCGGTTTGATTTGATTACTATTTTTATTATTATTATTATTATTTATTATTGTTATTATTGGACCAAGCATAGTGATAGATTGGGTTTACGTAAAGCATGTGTAGTAGCTAGAAAAAGGAAAGGAAAAAACAAAGAGAGTGAAAGGGAAAGGAGTAAAAAGGAGATGATGAAATCCAAACTAAGGAGAAGATGGTGTGAATGGCATGGCCATGCAATAATAATGTTCATTGCCAAACCTCAATAGTAGATTTTAGATGCTGACGTAAGCACCTCGTCACCAGAACAAACCCACACACCGTCTACGCCACGTGCCTACCACTGTGTCGGCTACGGTCAAAAGCCGGTGCCAGTCCCAGACACGTGTGACCTTTCTATTATCTCCAAACCAAATTTTGTATTTTCTAATTTATAAGTCCAAAAGTTTGAATCATTGACTTCAACACTCACTAATCACCCTCTCTCCACGCGCTCCTCACCCACCTCCCTCACACGCGCCCATCCCAAACGGAAAGTCCTCTTTTTTACACGTGATATAAACTGTGGAGTGCAAATATTGCACCCTAATCTGTGTTTAACCTTCACACGTTCTTCTTTCAACATTTTAATTTCTCAAACAAAAATAAAAATTGCAAAATTTAACTAATATAAACAATTTAAGTTAGGCTTAAATCCATTTCATTGAATTTTGATATCTGGTAAAGTTTTATATTTTTATTCACTTTTTTTTTTCTAAAAAAAATTAAACCATTTTGGTCAAATGTGCCATTTAATTAGTTAATAATAGCAATTACCCATTTAATATATAGATTTGCAATATATTTAATGATAGATTAAATGTTTAATTTAAAAAAATTAGAGAAACAAAAAATCTGCAATAACATATTTATATGCATGTGGAGTAAAAGTGATTTGAATGTTAATTATTGAAACAGTGTGGATGTTTATGTTCCTTGTGAAGAGTGCAGAAATTTACAGGATTGAAAAGTGTTAACAACATCCACTTGGATGTGTCTAGAAAAAGATATGAGAATCACGTAAAAACAATATCACAGTCAACCATGCTTTCTTTGACTATTCTTTTCCTACTGAACCAAAAAACGGAAACAAGACCAGCGGCTACAGATTTTAACTGGGTGAGACCACCTCGGATTCTAGTTTATGTTTTTGTTTTGTACACATACAATTAGTGGTTTCATGGATTTCGGCAAACAAGGAAGAGAGAACATAGAGAAACTCTTCTTCTTCTTCTTCATTTTTATAATTTTGGGTTGAAAAGAAAAGGTATTGTTTTGTAGAAGACTCCCAATTGGACTGAAAAGTCAAGCAAATTTAAAAAATGAACCATATTTTTATTGCCAACTCTTTGAGTTTCAAAAGGCTGAAGATTCGGTTATGCCAAATATTAATTCAGATTACATAAGAGTGATTAGATTTTATATATATAATAGCTGTGTGCTCACTCAATGCATATGGCAAAATCTACATTTTGTCTTGACCAGGGAATTCCAATTCTATATTTTAAGGCATATTTAGCCGAGAGTGATTTATTTAATGAATTGGTGGTGAGGTTATATAAGTATAAGAAAATGTATGGATTATGGTATGTTTGTTATTTTTTGGTGTATAATTGTAGAGTTAGGAATGAGAATCAGCCTGTCTCCATAAGTAATATTATGCATGGATGAGTTTCCTTAATGGAAGTAACATGACTGAAAATGTTTCCATATGAGAAAGCACTTTGTGGTCTTGTGATTGGAAGGTATTTTGTCAACCTCCTTTTAAAAGTGACCATAGCAGCTCCCCATTCAAACTCAAAGACTTTTTTTATTTCCCTATTTTTATAATCTTATAAATACACACATTAATTAAGTTGAAGAGATAAGCTACATAGTCCCCACCAAGCATACGCGACCTCACACAGTACTGCTCTTTTTCTTGTGCTACTTCTCTTCTCTTTCTTCTTCA


Gene Sequence:
>Vu_04257(+)
ATGTCTGTTGAACCTAAAGAACTTTACTACCAGGACCTTGTCCTAGACCACAACAATCACCACGGAACAGTAGCAGCAGCAGCAGGAGTAGGAGGAGGATCTGACATGTACCAAAAGCACTTTTCCACTTCCTTAATCCCTGCTGCTTCAACACCCTATGACTCACAACCCTTTGATCCCTCCTACATGACCTTCACCGAGTGTTTGCAAGGGGGCATGGATTACAATTCTCTTGCAACTTCCTTTGGCCTTTCTCCTTCCTCATCCGAGGTTTTCTCATCTGTTGAAGGCAACCACAAGCCTGCAGAAGGAGGAGACGGAGGAGGAGCCACTGCTGCCACTGAAACCCTTGCCACTCTTAACTCGTCTATCTCTTCTTCGTCTTCTGAAGCCGGGGCTGAAGAAGATTCAGGAAAGAGCAAAAAGGATAGGCAGGTGAAGACAGAAGAAGGAGGAGGAGGAGGAGGAGAAAACTCTAAGAAAGGGTGAGTGTCTTTTTTCTAATTTTCTTAACCTGATCTACCTCAACCCCTTGCTTTTATATATTTTTCTCTTGTTTATGCTTGAATGGTGCAACTTAGAATCTGTTTCTTTCAAATTAACAGGAACAAGGATAAGAAGAAAGGAGAGAAGAAACAGAAGGAGCCAAGGTTTGCCTTCATGACCAAGAGTGAGGTTGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCTGTCAAGAATAGCCCTTATCCAAGGTATGAACACCCTTTTCCCTTTCCTTGCACCCAAATAAGATCAAAATCAAGCCTAGCTATAGTTTCCACATAAAATTATTCCACACACAAATTCCCTTTGTCACTGATGTTATCATAGCTCCATCAATCTCTTAGATCTTTACATTTCAGATGAAATAAGAAATATGTATCTAAATATGACTCATTATATGTATACTAGAGACATTATTCTTGGTCCCGGTTGAATCCTAATGAAAATCAAGAAAAGGAAAATCAAACCAGACCTCATTACAGTAATGGGGTAAAGTGAAAAACGATGTGAAATGAGGTATTTTGATGGATGATGATGGTGAACGAATATTGCAGGAGCTACTACAGGTGCACTACACAGAAGTGCACAGTGAAGAAACGCGTGGAGAGGTCGTTTCAGGACCCAACCACTGTGATAACAACGTATGAAGGTCAGCACAACCATCCGGTCCCCACATCGCTGAGAGGGAATGCGGCCGCAGGAATGTTCACACCTTCTTTGCTCGCCACACCAACTCCACTTGCAGCCGGGTCAAACTTCCCTCAAGATCTCTTCCTTCACATGCATCATCAGCATCACCACCACCACCACCACCCTCACCATCACTTTCACAACACCCTCTTCTCCACACAATCAACAAACGCCGTTACCACCACCAGCACCACCGTTACCACTGCTTCCACTCCTCCCTCCATTTACTCATCCTATAACATTAACAACTCTCTTCTTCACAACCAGTATCTTCCTTCGGAATATGGCCTCCTTCAAGACATAGTCCCATCCATCTTCCACAACAAGACACACCACCAGAATTAA