Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_04203 LG1 57413189 57416451 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, embryo development ending in seed dormancy, embryo development ending in seed dormancy, embryo development ending in seed dormancy, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, pollen development, embryo development ending in seed dormancy, embryo development ending in seed dormancy
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, DNA-binding transcription factor activity, sequence-specific DNA binding, DNA-binding transcription factor activity, DNA-binding transcription factor activity, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
C/A 57413400 missense_variant p.Pro71His
G/A 57413715 missense_variant p.Ser176Asn
G/A 57413820 intron_variant
T/C 57413826 intron_variant
G/A 57413827 intron_variant
T/C 57414024 intron_variant
C/A 57414269 intron_variant
C/A 57414386 intron_variant
C/G 57414391 intron_variant
A/C 57414559 intron_variant
A/T 57414588 intron_variant
T/A 57414598 intron_variant
A/G 57414609 intron_variant
T/C 57414989 intron_variant
A/T 57415019 intron_variant
A/T 57415122 intron_variant
G/A 57415129 intron_variant
A/G 57415239 intron_variant
T/C 57415252 intron_variant
T/A 57415266 intron_variant
A/T 57415267 intron_variant
T/A 57415303 intron_variant
C/T 57415347 intron_variant
T/C 57415450 intron_variant
T/A 57415463 intron_variant
C/A 57415510 intron_variant
C/T 57415583 intron_variant
T/A 57415638 intron_variant
C/T 57415776 intron_variant
C/T 57415785 intron_variant
T/G 57415821 intron_variant
G/T 57416061 missense_variant p.Gly302Val
G/A 57416309 missense_variant p.Glu385Lys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_04203.1
MCNILDPIMDNYQGDLSDIIRASGASYGSCSMGTSSSKACAPFSLDHWQFSSVLEGFDGNFGDPFSNTRDPFLHQLELPACFNSTSSAEISSSGALEEATFFGGGVAASSSSSRNSCVLKETIFEDDDTRRPCNSILANMIQISPPNDKLPMSPLVESLSRALKPSGVVLGDTMISVKTSEDDCLVGNNNTKEMQISPPRNPCLKRRKSLAKKSICVPAPAAPNSRQSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRTDPNLLVITYTSEHNHPWPTHRNALAGSSRSQPSSKGNNFGASKNEETSPQNNEEQHEESNSDSNNVNNSACVQEDGEFSDIGLPYKPISNMKSYQQQQQLDQGLFAEFGEIEKAHSLNLMSPPQGFDDHQMKSNALDSFHIFDWSADNSTEFHLI*


CDS Sequence:
>Vu_04203.1
ATGTGCAACATCCTTGACCCAATTATGGACAACTATCAAGGTGATTTGAGTGACATAATTCGTGCTAGTGGTGCATCATATGGCAGTTGCAGCATGGGAACTTCATCATCTAAAGCTTGTGCTCCTTTTTCTCTCGATCACTGGCAGTTCTCTTCCGTTTTGGAAGGGTTTGATGGTAACTTTGGTGATCCATTCTCAAACACGAGAGATCCCTTTCTACACCAGCTTGAATTGCCTGCTTGCTTTAACAGCACAAGTTCTGCAGAAATTAGCAGTTCTGGGGCATTGGAAGAAGCAACTTTTTTTGGTGGTGGGGTTGCTGCTAGTAGTAGTAGTAGTAGAAACAGTTGTGTTTTGAAAGAAACGATTTTTGAGGATGATGACACGAGAAGGCCTTGTAATAGCATATTGGCGAACATGATTCAGATCTCTCCCCCCAATGATAAGCTACCCATGTCGCCATTGGTGGAATCTTTGTCAAGGGCACTCAAGCCTTCTGGTGTGGTTTTAGGTGATACCATGATTAGTGTGAAGACTTCTGAAGATGATTGCTTGGTGGGTAACAACAACACAAAAGAAATGCAGATCTCACCTCCACGGAATCCATGTCTTAAGAGAAGGAAGAGTCTGGCAAAGAAATCTATTTGTGTGCCTGCACCAGCTGCACCGAATAGCAGACAGAGTGGCGAGGTAGTCCCTTCTGATCTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGATCTCCATATCCAAGGGGTTACTATAGATGCAGCAGCTCAAAGGGTTGTCCTGCAAGAAAACAAGTTGAGAGAAGCAGAACAGATCCAAACCTGTTGGTCATTACTTACACGTCAGAGCACAACCATCCATGGCCAACTCACAGAAATGCTCTAGCTGGGTCTTCTCGATCTCAACCTTCATCAAAAGGCAACAACTTTGGTGCTTCAAAGAATGAAGAAACCAGTCCCCAAAACAATGAAGAGCAGCACGAGGAGAGCAACAGTGATAGCAATAATGTGAATAACAGTGCTTGTGTTCAGGAAGATGGAGAATTCAGTGACATTGGACTCCCTTATAAGCCAATATCCAATATGAAGAGCTACCAACAACAACAACAGCTTGATCAGGGTTTGTTTGCAGAGTTTGGAGAAATAGAAAAAGCTCACTCATTAAACCTAATGTCTCCACCACAAGGTTTTGATGATCACCAAATGAAATCCAACGCTTTAGATTCATTCCATATCTTTGACTGGAGCGCTGATAACAGCACCGAGTTCCACCTCATTTGA


Promoter Sequence:
>Vu_04203::LG1:57411189-57413189(+)
TGACTAGATTAATACCAATTTTATTTATTTATTTAAATTAGTATTAATTAAAAAGGTAGTTAAGAAAAAGATAATAAATATTCACTATTGAACTTAATAATAAATATTTACGTGTGAACTTAATAACAAAATAATAACTAGTTATTGAACATTGAATTTTTTCCATACATATATAGAAAATTTATGAGCAATTAAAATATTGAATACCTAAATTATTATTTAATGGATCTCATTTTAGACCCATTTCATATTTTATTGCTTCACTAAAGACTTTTTAACTTTTCATCTATTTTAATAATATGATTGTTCCTTAAATATTTTGGCTTGATTTTTTATCTAACTTAGAATGGGAAGGATTTTACAACTAAGATGAAATTAATGTATAAATCATTGATATTGTAGATTAACTTTATACATATGTTCAATTCATTATATTCTCTTTTGATATGGACTTTAATAAAAAAAAATTCAGACAATTTTTTTAATAATCATATTTTTTTTTTATATATAACAATGGAATAGTATATGAAGAGTGAAAGGTAAAAAAAAAATAAGAAAATGATAACGGATTGAAATGATCAAATGTAAATTGCAGGAATGTAAGTTGCATGTTTTGTAAAAAAATAACCCAAATTATAACATTTATTACTGGCTTTATCATTATTTTTTTTGTTTGCAGCATTGTTATGGTGTTTGAATTGTGATCACAATTTGTCACCTTTTTAACATTTAAGTAGTTTGTTTATATTTTGTATCTTTTTATGACTCTTAAATTAGAATAAAATAAAAAGAATTACATAAATTAAATTATATTTTTGGTGACCTTGAATATCTTTTTTGTTCTAGCGATCTCCTTTTGAGTGTAATCTTAAGTAGCAAAGATATTAAGTATACTAATATGTATTTAAGAATATACAAATACGCATATGAATAGGTCTTCAATTAAAAAACGAGGATTCAAATTGAATGATGCGAAACGTTTCTCCGAAAAAAGCGGCTTCTTGTCGCCTCTTTTATTGTTTTGGAGAGGTGACCATTCCGTAATCTTTCCTTAACCGAGAGAAAAATATAAATAAAGGAATACATAATTAATTATATTAACGAAAGATAATCCCACATTTTTATCATTTGATGACAGTGTTGGATAAATTATACTGTTATTCCTTCACTTAAGATTCCCCAACTTTTATCCATAATTAATGATAAATAAATTATTAATTAATAATATATTGAGTAAGACATGCATTTAATTTAAATAAACACATTTGTTTTTTCAATTACTACTCGCTCCATCTCTTTTATCTGTGTCGATTTTGAAAAGAAAAATTCATTATACTTGTCTTTTGAAAAACTAATAATATTTTCATTTGTTTTTATCATACTCATTCCTACCCGTTTATTATTTTAGAGAGAGAGAGAATTGGATAAAATAATAATAAAAGTATATAATTGTTTTACTAAAATTAAGAAAAACTATTATATTATTTTATTCTTGAACACGTATAGAAAGGAAACACAAGAGTGATAAATACACATTAATTAATAATTAATTTGTGATGAGCGTGTGAAAAGTACAGTATAACCTAACTAACGTGTATGTAAGAAATATTTTATGTTATATCCGACCTCAACAACATCCATTTTAATAGTCTTAAAATTCTTGTTCTCTTGTTATTTATTTAATGAAATAGTTGCGTATGAATGGGAGCGCTTGGAGAAGCTGTGTTAAAAGTCAGCGTCGTCTGTGTTTTTCAATTCTCTTCTGTGTGTATTTGGAGAAAGGAACAGTCAGTTTTCAACCTCCAAAACCTGTTCATTTGCTTTTTCTTGCCTCTTAGTAGCCACAATAAATCTCATTTCCTCATCACAGAGTTTTCACTCTCGCTACTCATAACCTCTTCATCCAAAAACATCTATCAAAATTCCTAGATTTCCATACAAACTCTTCATGGCACTGTTAATTTCCTGCTGCTTGAAGAATTTTCACTAAGGAAAAAGCA


Gene Sequence:
>Vu_04203(+)
ATGTGCAACATCCTTGACCCAATTATGGACAACTATCAAGGTGATTTGAGTGACATAATTCGTGCTAGTGGTGCATCATATGGCAGTTGCAGCATGGGAACTTCATCATCTAAAGCTTGTGCTCCTTTTTCTCTCGATCACTGGCAGTTCTCTTCCGTTTTGGAAGGGTTTGATGGTAACTTTGGTGATCCATTCTCAAACACGAGAGATCCCTTTCTACACCAGCTTGAATTGCCTGCTTGCTTTAACAGCACAAGTTCTGCAGAAATTAGCAGTTCTGGGGCATTGGAAGAAGCAACTTTTTTTGGTGGTGGGGTTGCTGCTAGTAGTAGTAGTAGTAGAAACAGTTGTGTTTTGAAAGAAACGATTTTTGAGGATGATGACACGAGAAGGCCTTGTAATAGCATATTGGCGAACATGATTCAGATCTCTCCCCCCAATGATAAGCTACCCATGTCGCCATTGGTGGAATCTTTGTCAAGGGCACTCAAGCCTTCTGGTGTGGTTTTAGGTGATACCATGATTAGTGTGAAGACTTCTGAAGATGATTGCTTGGTGGGTAACAACAACACAAAAGAAATGCAGATCTCACCTCCACGGAATCCATGTCTTAAGAGAAGGTGAGGTATTAGTTAATTGATTAATTAGTCAAATAGTAAATTATAATACTGAATTAAATGGAGAACTGCTTCCAAGAATTGAGTTTAATTACATCTTGTCCATTAGTTTTATGTTGGCATCATAGATTTTCCAAACGGAATTAATCACAGTTATTTTTGGGAACTTAAATTTCAGTGAAACCATGGTGAGGTAATAAAGTAGGGTTTGGCATGAGTGAGTGAGGTAACTCTTTTGTCTTATTTTCCTGATATGTTTGGTTGACTGCATCTGGTCATAAAAACTAAGAGGATTATGATTATTTCATGTTGGAAACAGTTCATTGTGATTAAGACTAAACATGGTGCATCGATGCCTTTACCAGGGTTAATCCACCTGAAAAGTAGAGCTAGCTAGATAGGTGTCACCATAGCAGTCACATACTGAGCTTTCAAGAAAGCTTATCGTAAACTACTTTTCTTCCGAACACACCTGAAATGTTCTGTTCCTTTGATCATCGGATAAAAACCATATCCCTTTTCTATCCACAACATTTCCACTATTTCAGTGGAATTAACTCTAAACCAGAAAGATTAAACACCCTCCTGTAGCTATTAAGGAGACACGTATAATTGAGAAATTATATTTTTATAACTGCTTTTCAGAATACTTCTATAAATAGGAAAGAAAAAAGAAGCATAGGTTAAATAATGTAACAAAAAGACAGGAAAAAAAATAGTTATAATACAATATATTAAACATATTGTAACTCCATGAAATTAAAGTTTTTAGTTGAAGTTTAAGGAGAATGATGTAAGTGATAATATGATACTGTTGTGTAATTGCAGGAAGAGTCTGGCAAAGAAATCTATTTGTGTGCCTGCACCAGCTGCACCGAATAGCAGACAGAGTGGCGAGGTAGTCCCTTCTGATCTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGATCTCCATATCCAAGGTAAGTTATTGGAATAGTGTAATCTTTCACGGAAGAGATAAGGTATTTTAATCAAGATTTTGCCTAACTTCTTTAAACAAACATAGCACGTAATAAAGTGACCAGATTTTAGTACAAATTTTAGGTTTTTGTATGCTTTGTTAATTAAAATTGTAGTTTTGTTTTGTTAATCTGTGCAGTATATATAGAAACATTGGTAAAGCTTTGAATTTGATTAATCAAAACCACTATATAATAATCACTTAAAGTGCCACACTTAATTTTGTCCCAAGAAGAAAAATAATATTGTGTTTACTCTTTTATATTAAACTATTTGGTAAACATAAAGCCACACAACTTCAATTAATATATGTAGTTTTAATTTTTCACTTCAAACTTTTCTTTGCTTTTAGTATTATTACGTTTAGAGAAAAAAAGAAGAAGAAAAGGCTATACACAACACTCTAATCACAATCTATTATGATAGAGAAAAGATACTATTATTTCTAATATATACATTGAAAGTATGATCGGTTAGTGAAATGACATTGTCATATGTTTGATGACAAAATATTATATTTATAAGAGTTGAACTTTTTATACTATCAGCGTATAGTTTATTTTCCACAGTTACCTAATTAATAAATGAGGTAATTATACGTTCAAAAGAATTATTATAAATTCAACTGTTTATATTGAATGACTACATTAAAATATTATTAATTACATTAAATTAAATTCTTTGTAAAACAAGCACAATTATTCATGAAAACGCCACAAACAAATATTTTAATCTTGCAGTAAGATCTAACTCAGGTGTTAATTTATTCTGATTATACCCTCCAAAAGAAAAATGACACTTGAACAGATAAAACTAACATTATTTTTTAATCACGTATCATACTTTCATCGGGTGACAAGGAAATTAAGGAAGCACCGATGGTAAGGTATCTCGTAATGTGTTATGTTTTTTCGTTATCTCTTACCCATTCCAAAAGCTTTCTTTGGCAAATGTTTTACACCGGAAGAAACTTACTGTACTCACGTCAAGCAATTTATTTTTATGGTACGTAACATTATGTCATTGGTGCAGGTGCAGTAATTCATGGTCTTCCTCAATATCATGTTTGTGTTCTTATGTTTGTCTCTCTCTTGTTATGTAGGGGTTACTATAGATGCAGCAGCTCAAAGGGTTGTCCTGCAAGAAAACAAGTTGAGAGAAGCAGAACAGATCCAAACCTGTTGGTCATTACTTACACGTCAGAGCACAACCATCCATGGCCAACTCACAGAAATGCTCTAGCTGGGTCTTCTCGATCTCAACCTTCATCAAAAGGCAACAACTTTGGTGCTTCAAAGAATGAAGAAACCAGTCCCCAAAACAATGAAGAGCAGCACGAGGAGAGCAACAGTGATAGCAATAATGTGAATAACAGTGCTTGTGTTCAGGAAGATGGAGAATTCAGTGACATTGGACTCCCTTATAAGCCAATATCCAATATGAAGAGCTACCAACAACAACAACAGCTTGATCAGGGTTTGTTTGCAGAGTTTGGAGAAATAGAAAAAGCTCACTCATTAAACCTAATGTCTCCACCACAAGGTTTTGATGATCACCAAATGAAATCCAACGCTTTAGATTCATTCCATATCTTTGACTGGAGCGCTGATAACAGCACCGAGTTCCACCTCATTTGA