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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_04136 LG1 56223198 56225261 PREDICTED: L-type lectin-domain containing receptor kinase S.4-like
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Annotations  
category   relationship type   keyword
Biological Process   involved in   defense response to bacterium, defense response to oomycetes, defense response to oomycetes, defense response to bacterium, protein phosphorylation, defense response to oomycetes, protein phosphorylation, defense response to bacterium, defense response to bacterium, defense response to bacterium, defense response to oomycetes, defense response to oomycetes, defense response to bacterium, protein phosphorylation, defense response to oomycetes
Cellular Component   is active in   plasma membrane
Cellular Component   located in   extracellular region
Molecular Function   enables   transmembrane receptor protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, kinase activity, transmembrane receptor protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_04136.1
MAMHASGILLVVLYSLLRFALSDINFVKYDFLQAGLKTDGAYVRPNGILTLTNDSSKIFGHAFYPSPLPFKSSKNKSIVSTFSTTFVFSIVPKYPDLGGHGFAFVLISTNEPKGCLTNQYLGLPNETSNKELSTRFLAVEFDGVQNLELEDIDDNHVGIDISSLISNISKSAAYYLERNGQEDHSKNISFSLKSGKPIQAWVDYNEGEMMMHVTVSPFGMPKPYFPLISFRIDLSLVFDDYMYAGFSASNGLLVAEYNIHGWSFKVGAAAQALEKSSVPLIRSNTSIKVVHKKHFAVGITLASASLFILTIIGALALHRLRNREEVLEDWELEFATHKFKYSELHSATGRFGDRNLIGYGGFGKVYRGVIPSTGLEVAVKRVAPDSRQGIREFVAEITSMTQLKHRNLPQKNPEELVLVDWVRDLHHRGQVCRAIDPSLYEYDKDEAQLVLSLGLLCSHPNPHYRPNMRRIVQFLMGEIILSPLPPDIHSEGPREIAKCPCNFPYDSQPSSSMVSSSNYYSLTCFDEVVYPAELTGITS*


CDS Sequence:
>Vu_04136.1
ATGGCAATGCATGCATCTGGCATCCTTTTGGTTGTTCTGTACTCTCTGTTGAGATTTGCATTGTCGGATATCAATTTTGTAAAATATGATTTTCTGCAAGCAGGCTTGAAAACGGATGGAGCTTATGTGAGGCCAAATGGCATACTTACCTTGACAAATGATTCCTCAAAAATCTTTGGCCATGCATTCTATCCATCTCCTTTGCCATTCAAATCTAGCAAAAACAAATCCATTGTTTCAACCTTTAGCACTACCTTTGTGTTTTCCATAGTTCCTAAGTACCCAGATCTTGGAGGACACGGTTTTGCATTCGTCCTAATATCTACCAACGAACCAAAAGGGTGCCTCACAAATCAATATTTAGGCCTCCCAAATGAGACAAGTAATAAGGAACTCTCAACCCGGTTCCTAGCTGTAGAGTTTGATGGGGTACAGAACCTTGAACTTGAAGACATCGATGATAATCACGTGGGGATAGATATATCCAGCCTCATCTCTAACATATCTAAGTCAGCAGCATACTATTTAGAAAGAAATGGCCAAGAAGATCACAGCAAGAACATTTCCTTCAGTTTGAAGAGTGGAAAACCCATTCAAGCATGGGTTGATTACAATGAAGGGGAGATGATGATGCATGTCACAGTTTCTCCTTTTGGCATGCCAAAGCCATATTTTCCTTTGATATCATTTCGCATAGACCTATCCTTGGTGTTTGATGATTACATGTATGCAGGTTTTTCTGCTTCCAACGGTCTGCTGGTAGCTGAGTATAATATACATGGTTGGAGCTTCAAAGTAGGAGCAGCAGCACAAGCGCTAGAAAAATCATCCGTGCCACTTATTCGGTCAAATACTTCTATTAAGGTGGTGCACAAAAAACACTTTGCAGTAGGTATTACTCTAGCAAGTGCATCTCTTTTTATATTGACAATTATAGGAGCTCTTGCCCTACACAGATTAAGAAATAGGGAGGAGGTTTTAGAGGATTGGGAACTCGAATTTGCCACACATAAATTTAAATATTCTGAGCTCCATTCAGCTACAGGAAGGTTCGGGGACAGAAACCTTATTGGGTATGGAGGTTTTGGTAAAGTCTACAGAGGTGTAATCCCTAGCACAGGACTAGAAGTAGCCGTAAAGCGGGTTGCTCCTGATTCAAGGCAAGGAATCAGAGAATTTGTAGCGGAAATAACAAGCATGACACAGCTTAAGCATAGAAATTTGCCCCAAAAGAATCCCGAGGAACTGGTATTGGTAGATTGGGTTAGAGATCTACATCACCGAGGACAGGTCTGCAGAGCTATTGACCCCAGTTTATATGAGTATGACAAAGATGAAGCTCAGCTTGTGCTTAGTCTTGGATTGCTTTGCTCTCATCCCAATCCTCATTACAGACCTAATATGAGAAGGATTGTCCAGTTCCTTATGGGAGAAATTATCCTTTCTCCACTTCCTCCTGACATTCACAGTGAAGGTCCAAGAGAAATAGCAAAATGTCCCTGCAACTTTCCATATGATTCTCAACCTTCAAGTTCTATGGTGTCTTCGTCAAACTATTATAGTCTTACATGCTTTGATGAGGTGGTCTACCCTGCTGAACTCACTGGTATCACTTCATAG


Promoter Sequence:
>Vu_04136::LG1:56225261-56227261(-)
TCTTAATATAAATATCAAATTCACATTGATTTAGCTGCTTAGCAGTGGATGAGTAGTACAAAAATGTAAGGGATAAACAGTTCACTGAAGGAAAATAAAGTTAATAACAACAACTTTGTTTTGGTCAGCATTTACTTGAATATCAACTTCACCAACACATTTGTGTGCATGGCTCCACAATCAAGCTCCACATATGTCACTCTCCAATGCTAATAATTGAAGAGTTACAAAAATACTTATGGTGATCTTATACATTTATAAGAAATAAATCAATTTTATAACATGTAAATGAATATAAATTTTATTTTACATTGTAAAATTAAATTATATTTAAAATTTATTTTTCAAAATATTATTAGAGCTATTCAAAATTTATTCTACGAGAGATTTTTTTATTTATTGGATCAATCATACCATCAAATCATCTATTAATATCTAGTCATACCATCAAATCATCTATTGTGTGTATATACTTTAATGTTAGAAGAATATATTAAATATCTCCAACAACTAGAAATAAAGTAAATTTATATATATTTATGGATGTTGAATATTGTAACTCACGTAATAAGAAAGTAATGTTTCAATATCACCAATAATTGTCTTGGTTTTTCTTTTATTCTTCAAAATATATTAGGCCACTACAATCCCTTTTTCATTGGACTACTAATTCTATGGATAAGGAGAGGTTTGCAAGGTTTACAAGTATAATCTATCACAATTATAAGGTGATACTCATTTTTTCCTCTCTACACGTTTAAACATGTTTAATTCAGGTATGGTAGAAAACGAAGGTTGTCTCCAATGACACTTTGATCTTGAGGGTCTTTGGTTTTTGAGCTTCAACAGGGTCAGGTCTCTCTCTCCAGGAACATTAGGTCCTTGCTCCAAGAATACCACTTGCCTTGTAGTTGCCTAGTTTGGGACAAATGAACATATCACACTTAATTAACAATACTACTTTATTGATATGCAAAACACAGGTATAAATAATTCATTGAGTGTTTTGCGGTATACGTTATTCCATGTGTTCATCTCAGAGTTCCCCAATAGCAAGCCGTTTGAATTTGGCAAATGCAGAATCAAATTCTGAGGATATTTTTCTTAGAGGAAAAAGATCATATGGTTTTAGTCTGATCAATGTATAACATTTTTCTATCTTGTCATGTAGAGAACTGAAAGTTATGACAAGAACTGTGGTAACATCTTTTTGTCATAAGAGAGTTTTAAGAAAATAAAATAGAAAGTATTTAGAAAGGGTTATAATAGAGAGTGGATATACACTCGTTTAGACTTTGCCATAAATGTTTAATACGGGATTGATTAAATTTGTGTAAGTAATTTATCATCATTCTGTACATTTTTTTAGTTTATTTAATAGAGGTTTGATCAAGTTATTTCTTCAATTACTGTACCAAAACAAAGTTATTTCTTCAGTCGTTAATTTGTGAGAATAACGCATGAATTCTAATCAATGTATAACCTGCCCTCAGCTTCAATACGACAGAATCATATAAAAAAAATATTAATTGTTTTTCAGAAGGTCTTCACCAACTACTTTTATTCAAACTATTTCTCATACGTGTTTTACTGGTAGCCTAGAATAGCCACATGATCAAGCATGTGTTTGTAATCTTTTTCTTAAAACTGAGTTATCTTAGTTTTAACTTTTTATCTTGATATCTGTACTTGTCATGAGATAATATACATTAATTCCTTTTTTTTCTCACCATTCTAATGAGATACACTTTTTGTTTTTCAGGGATTTTTATTTAAGTACAAGTTGACATTTTTCAATTAAAATGATGTCTCAAGCCTTTTCTAAGTTATTTTCATTGATATCCTTATTTGGGTTTAAAAAACGATTCTTACTTCCAAGGTGCATAGTTCCAAACGCAGTATTAATAGGCTCTTTCCACCAAAACTTCAGAGTAACTATAATCCTATTTCAGATAGCAGTGTTCTAATCTTTTTCAACAACCAATAGCAACTTCACAAGC


Gene Sequence:
>Vu_04136(-)
ATGGCAATGCATGCATCTGGCATCCTTTTGGTTGTTCTGTACTCTCTGTTGAGATTTGCATTGTCGGATATCAATTTTGTAAAATATGATTTTCTGCAAGCAGGCTTGAAAACGGATGGAGCTTATGTGAGGCCAAATGGCATACTTACCTTGACAAATGATTCCTCAAAAATCTTTGGCCATGCATTCTATCCATCTCCTTTGCCATTCAAATCTAGCAAAAACAAATCCATTGTTTCAACCTTTAGCACTACCTTTGTGTTTTCCATAGTTCCTAAGTACCCAGATCTTGGAGGACACGGTTTTGCATTCGTCCTAATATCTACCAACGAACCAAAAGGGTGCCTCACAAATCAATATTTAGGCCTCCCAAATGAGACAAGTAATAAGGAACTCTCAACCCGGTTCCTAGCTGTAGAGTTTGATGGGGTACAGAACCTTGAACTTGAAGACATCGATGATAATCACGTGGGGATAGATATATCCAGCCTCATCTCTAACATATCTAAGTCAGCAGCATACTATTTAGAAAGAAATGGCCAAGAAGATCACAGCAAGAACATTTCCTTCAGTTTGAAGAGTGGAAAACCCATTCAAGCATGGGTTGATTACAATGAAGGGGAGATGATGATGCATGTCACAGTTTCTCCTTTTGGCATGCCAAAGCCATATTTTCCTTTGATATCATTTCGCATAGACCTATCCTTGGTGTTTGATGATTACATGTATGCAGGTTTTTCTGCTTCCAACGGTCTGCTGGTAGCTGAGTATAATATACATGGTTGGAGCTTCAAAGTAGGAGCAGCAGCACAAGCGCTAGAAAAATCATCCGTGCCACTTATTCGGTCAAATACTTCTATTAAGGTGGTGCACAAAAAACACTTTGCAGTAGGTATTACTCTAGCAAGTGCATCTCTTTTTATATTGACAATTATAGGAGCTCTTGCCCTACACAGATTAAGAAATAGGGAGGAGGTTTTAGAGGATTGGGAACTCGAATTTGCCACACATAAATTTAAATATTCTGAGCTCCATTCAGCTACAGGAAGGTTCGGGGACAGAAACCTTATTGGGTATGGAGGTTTTGGTAAAGTCTACAGAGGTGTAATCCCTAGCACAGGACTAGAAGTAGCCGTAAAGCGGGTTGCTCCTGATTCAAGGCAAGGAATCAGAGAATTTGTAGCGGAAATAACAAGCATGACACAGCTTAAGCATAGAAATTTGGTGCAATTACATGGGTGGTGCAGGAAGCAGGATGAACTCCTCATTGTGTATGATTATCTACCAAATGGAAGCCTAGACAAGCTTCTGTTTGAAAATGATCATCAAAAGAAGAAATTACTAACTTGGGAACAAAGATACAAAATCATTATTGGAGTTGCCCAAGGGCTGTTGTATCTCCATGAAGAAAGTGAGGTGCAGGTTGTTCACAGAGATGTAAAGCCAAGCAATGTCCTGATAGATGCAGATCTCCAACCAAAGCTTGGAGATTTCGGTCTTGCAAGGACTTACGAGCATGGAATCAATCCACAGACAACAAGCGTTGTGGGAACATTAGGCTACATGGCCCCTGAGCTCACCAAGACTGGGAAAGCAAGAACAAGCACAGATGTATATGGGTATGGAGTACTCATTTTGGAAGTAGCATGTGGAAGGAGGCCAATAGAGCCCCAAAAGAATCCCGAGGAACTGGTATTGGTAGATTGGGTTAGAGATCTACATCACCGAGGACAGGTCTGCAGAGCTATTGACCCCAGTTTATATGAGTATGACAAAGATGAAGCTCAGCTTGTGCTTAGTCTTGGATTGCTTTGCTCTCATCCCAATCCTCATTACAGACCTAATATGAGAAGGATTGTCCAGTTCCTTATGGGAGAAATTATCCTTTCTCCACTTCCTCCTGACATTCACAGTGAAGGTCCAAGAGAAATAGCAAAATGTCCCTGCAACTTTCCATATGATTCTCAACCTTCAAGTTCTATGGTGTCTTCGTCAAACTATTATAGTCTTACATGCTTTGATGAGGTGGTCTACCCTGCTGAACTCACTGGTATCACTTCATAG

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