Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_04077 LG1 55426898 55428025 PREDICTED: receptor-like protein kinase
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   defense response to bacterium, protein phosphorylation, defense response to bacterium, response to wounding, protein phosphorylation, defense response to bacterium, response to jasmonic acid, response to jasmonic acid, protein phosphorylation
Cellular Component   is active in   plasma membrane
Cellular Component   located in   plasma membrane
Molecular Function   enables   protein binding, protein binding, protein binding, kinase activity, protein serine/threonine kinase activity, protein binding, protein serine/threonine kinase activity, protein binding, protein binding, peptide binding, protein binding, protein binding, protein binding, protein binding, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
C/T 55426968 missense_variant p.Ser353Asn
T/G 55426972 missense_variant p.Ile352Leu
T/G 55426980 missense_variant p.Gln349Pro
T/C 55426982 synonymous_variant p.Lys348Lys
C/T 55427055 missense_variant p.Gly324Asp
G/A 55427095 missense_variant p.Arg311Trp
C/T 55427106 missense_variant p.Arg307His
G/A 55427142 missense_variant p.Ser295Phe
G/A 55427170 stop_gained p.Gln286*
A/G 55427205 missense_variant p.Leu274Pro
C/A 55427288 missense_variant p.Leu246Phe
G/T 55427321 missense_variant p.Ser235Arg
C/G 55427374 missense_variant p.Glu218Gln
C/T,A 55427386 missense_variant p.Ala214Ser
G/C 55427419 missense_variant p.Leu203Val
C/T 55427437 missense_variant p.Glu197Lys
T/C 55427514 missense_variant p.Tyr171Cys
A/G 55427524 synonymous_variant p.Leu168Leu
T/A 55427580 missense_variant p.Asn149Ile
C/G 55427582 synonymous_variant p.Val148Val
C/T 55427584 missense_variant p.Val148Met
A/G 55427616 missense_variant p.Ile137Thr
C/T 55427622 missense_variant p.Ser135Asn
G/A 55427630 synonymous_variant p.Ser132Ser
C/G 55427638 missense_variant p.Asp130His
G/A 55427729 synonymous_variant p.Asn99Asn
G/C 55427733 missense_variant p.Thr98Ser
A/G 55427830 missense_variant p.Tyr66His
C/T 55427834 synonymous_variant p.Lys64Lys
G/A 55427876 synonymous_variant p.Cys50Cys
C/T 55427914 missense_variant p.Asp38Asn
A/G 55427939 synonymous_variant p.Ser29Ser
C/T 55427971 missense_variant p.Gly19Arg

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_04077.1
MVELKHLKNISFFENQFSGVIPQSLGINSSLVVLDVTDNNFTGPIPPNVCFGKQLVRLNMANNKFYGSIPPDLGRCTTLERLRLEGNNFSGALPDFETNPNLLHMNINNNNISGEIPSSFGNFTNISLLDLSVNSLIGLVPSELGNLVNLFTLVLSHNTLKGPLPHRLSNYNKMINFDVGFNFLNGSFPSNFRNWTELNTIILSENNFDGGIPAFLSEFERLNDLQLGGNMFGGSIPRSIGELVDLMYVLNLSANGLIGELPREIENLKNLIKLDLSWNNFTGSIQVLDELSSLSEFNISYNSFEGRVPLRLTNFINSSLSFFGNPSLCISNFPENSYLRPCDTNSEKQERISKVAVAFIALGSSNCTIYFLSRL*


CDS Sequence:
>Vu_04077.1
ATGGTAGAGCTTAAACATCTTAAGAATATCTCCTTCTTTGAAAATCAGTTCTCTGGAGTCATTCCTCAAAGCTTAGGGATCAATAGTAGTTTGGTTGTGTTAGACGTCACGGATAATAATTTCACCGGTCCCATCCCACCAAATGTTTGCTTTGGAAAGCAATTGGTCAGGTTGAATATGGCTAACAATAAGTTTTATGGCAGCATACCACCTGATCTTGGAAGATGCACAACTCTTGAAAGGCTCAGACTTGAAGGAAACAATTTCTCTGGGGCACTTCCAGATTTTGAAACTAACCCAAATCTCCTTCATATGAACATCAACAACAACAATATCAGTGGGGAAATTCCATCAAGTTTTGGAAACTTCACAAATATCTCTCTTTTAGATTTATCCGTGAACAGCTTGATAGGTCTTGTACCCTCAGAGCTGGGAAACCTTGTGAATCTGTTCACATTGGTTCTTTCTCACAATACTTTGAAAGGCCCTTTGCCACATCGATTGTCAAACTATAACAAAATGATCAACTTTGATGTTGGATTCAATTTCTTGAATGGTTCGTTTCCATCAAATTTTCGGAATTGGACTGAATTAAATACTATAATTCTCTCGGAGAATAATTTTGATGGTGGTATTCCAGCATTCTTGTCAGAATTTGAAAGGCTCAATGATTTACAACTTGGAGGAAACATGTTTGGAGGGAGCATTCCTAGATCAATTGGAGAACTGGTGGATTTGATGTATGTTCTAAATCTAAGTGCTAATGGGCTGATAGGTGAGCTTCCTAGGGAGATCGAGAACCTGAAGAATCTGATAAAACTGGATCTATCTTGGAACAATTTCACAGGAAGTATACAAGTTCTCGATGAGCTCAGTTCATTATCTGAGTTCAACATTTCATATAATTCTTTTGAAGGTCGTGTTCCACTACGGCTAACAAATTTTATAAATTCCTCTCTATCGTTTTTCGGCAATCCTAGCCTATGTATCTCAAATTTCCCTGAAAACAGCTATTTGAGGCCATGTGATACAAATTCAGAAAAACAAGAAAGGATCAGTAAAGTTGCAGTTGCATTCATAGCACTTGGATCCTCAAATTGCACAATTTATTTCCTATCAAGGCTATGA


Promoter Sequence:
>Vu_04077::LG1:55428025-55430025(-)
CATTTTCGGGGGTGCACACAGCAGCATGTGGTGGCAAAGAAGCTGCGCATTTAATTGTCCACGGTCCAGCTAGGATGATGAAGCACAATTTTTGACTTGTTTTTCCACCCAATGCTCACGGTTCTCTAAATTTAGTTGGAAGATAGCAAGTTACACGGCCAAAGGGTGCATTCAATTGAAAGAAGAAGCACACAGCAGCAGGTTGCGTTGCAAAGATGGTGTGCACGTTGGGCTTAATAGCTGCCACGCGTCCAAAATGTTTTCCTCATTCTCCAGCAGCCACAATGGAAGAGGGGGGTGCATCCAGCAAAGGGGGTGTCCAGAGAAGCAACACTCACGCTCACACACGAAGCATCCACATCAGCACACGGGAGGCCCAGCAGTGAGGACGTGGTTCTGGAAGCACATCACGCCCTGCAAAGAAAAGAAGAAGCACGGCCCAGCTAGCAGAAAGAGGTCCAGGAGGTGCAGGTTTTTGGGGGGGGCATCCAGCCGCCACTCTAACGTTTTGGGGGGGAATTAGGTTGGAGTGAGCAGCCACCCACGAGGGGGTCTCTCTCGGTTCTCTCTTCCAGCAGCTCTCAGTTTTCATTTCAGTTTTCATTTTTTTTCTTTTCTTAGAGAATAGGTGCTGGGAACATTTTAATTTTGGAAGAAAGAAAAAAAAAAGTGTGAATGTTGTTACGGTGGAATGAAAATAGCTTCACTTTAATTTTATGTTGCTGAATTCACTCTTGCCTTTTCATTTTGCTTTTCACGCACTATTTGATTGAAGAATAGTCTAGCACACTGAGAACGTTTTTGTTTCCTTAAATTACATCTTGCACTTCATTTGGCTGGAGGTGACACACGGACATAGTTAGCTGAAGCATGCACACGTTGAGCTTGAAGAGAACAACACGTTTCTTTTCTCTTTTCTTTTAATGTGCAGGTCACGGCTAGGAAAAGTGGGAAATACACAAGAGAAGCAAGTATCGGTGATTACATTCCTTTTCTTTGCATTCATTCGATTTTGGGGAAAAACTGTTGATTCATGGTTGGAATGCATACGGATGCCATGTTCACGGGAGAAGAAGTCCAGAGATGTGTTTTATGGTTTAGCAACTTCATTTATAATTTATGCCTTTGATTATTTGTTCGCTTCTAAGGTGTTTCTTCGAAATTGTATTTCAAACTGAAATGAGCATTAATCTTTTTAATTTAAGTGTTGCATTTTAATAATTTTAATTGTGTTTGAATATTTATTTTTTTTGCATTGTTGAGTCTAGTTTTACCGTTTATCATGTTGTCCATTTCGTTCAGTTTTTTTTATCTTCCTGTATTTCCAATTTCCTCACTTACTTTAGAAACCGTTCAATCTCAATGTAGAAGCGTTCATCTATAGGACCGTCGGTCCTCATTCTGTTTTCATTTACTTTAATGTTTCCAATTGTATTCGGTTGTGTTTAATTTTCATTTTTAATTTCGTCATTTGCATTCACAAAATATTTCACAAACCCCCCCACTACGTGTTTGATCTGAGACTCGAACCACATTTGGTCCTTGAGAGACGACCTAGGAGTCACTTCCTAGTCTATACTGCATTCTTTATGCACAACTTTTGTTGGGAGGTGCGACCCTCTCATCAGTATACCACCAAGCTTGGGGAATTGTACTGGCCTAATAGAGTTTTATGCTACAGCCAGTAACTTAGTTGGCAGTATACCATCAACCTTAGGACTCCTTACCAACCTTTTTGTTCTAGTGATTCCAGAGAACAGTTTGTCAGGGAAAATACCTCCACAGATTGGTAATTGCAAATCACTGGATATGTTGTATTTGAATTTCAATGAACTCGAAGGAGAAATTCCAAGTGAATTAGGAAACTTGAGTATATTACGCGAACTTATGTTGTTTGAAAACCATTTGACAGGAAAAATTCCACTTGGCATTTGAAAATTCAAACACTTGAGCAGGTACATGTATACATTAACAACCTTTCAAGTGAGCTACCTCTTGAG


Gene Sequence:
>Vu_04077(-)
ATGGTAGAGCTTAAACATCTTAAGAATATCTCCTTCTTTGAAAATCAGTTCTCTGGAGTCATTCCTCAAAGCTTAGGGATCAATAGTAGTTTGGTTGTGTTAGACGTCACGGATAATAATTTCACCGGTCCCATCCCACCAAATGTTTGCTTTGGAAAGCAATTGGTCAGGTTGAATATGGCTAACAATAAGTTTTATGGCAGCATACCACCTGATCTTGGAAGATGCACAACTCTTGAAAGGCTCAGACTTGAAGGAAACAATTTCTCTGGGGCACTTCCAGATTTTGAAACTAACCCAAATCTCCTTCATATGAACATCAACAACAACAATATCAGTGGGGAAATTCCATCAAGTTTTGGAAACTTCACAAATATCTCTCTTTTAGATTTATCCGTGAACAGCTTGATAGGTCTTGTACCCTCAGAGCTGGGAAACCTTGTGAATCTGTTCACATTGGTTCTTTCTCACAATACTTTGAAAGGCCCTTTGCCACATCGATTGTCAAACTATAACAAAATGATCAACTTTGATGTTGGATTCAATTTCTTGAATGGTTCGTTTCCATCAAATTTTCGGAATTGGACTGAATTAAATACTATAATTCTCTCGGAGAATAATTTTGATGGTGGTATTCCAGCATTCTTGTCAGAATTTGAAAGGCTCAATGATTTACAACTTGGAGGAAACATGTTTGGAGGGAGCATTCCTAGATCAATTGGAGAACTGGTGGATTTGATGTATGTTCTAAATCTAAGTGCTAATGGGCTGATAGGTGAGCTTCCTAGGGAGATCGAGAACCTGAAGAATCTGATAAAACTGGATCTATCTTGGAACAATTTCACAGGAAGTATACAAGTTCTCGATGAGCTCAGTTCATTATCTGAGTTCAACATTTCATATAATTCTTTTGAAGGTCGTGTTCCACTACGGCTAACAAATTTTATAAATTCCTCTCTATCGTTTTTCGGCAATCCTAGCCTATGTATCTCAAATTTCCCTGAAAACAGCTATTTGAGGCCATGTGATACAAATTCAGAAAAACAAGAAAGGATCAGTAAAGTTGCAGTTGCATTCATAGCACTTGGATCCTCAAATTGCACAATTTATTTCCTATCAAGGCTATGA