Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_04009 LG1 54490624 54492546 PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 54491533 missense_variant p.Met304Val
T/C 54491965 intron_variant
T/A 54492171 intron_variant
T/C 54492288 intron_variant
A/T 54492290 intron_variant
T/A 54492544 missense_variant&splice_region_variant p.Met425Lys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_04009.1
MAASGLLFRIILFILIIAIAITNAHTQSFECPNFSSTCIKHLKLEGSASTSGSAIQLTEENAISPSKSFGSAGRVTYAERINLRDNSSNEPRDFITNFSFVVSSNQSIYGDGLAFFLASPNLPSTDKLQLRGGSLGVGLTDGNRELFWLGYRFLAVEFDTFRNPWDPVGAHVGININDMESKIFETWWIDMTHRKVCNCSIVYDSRNSILNVSYTGYKLSDGKVRKTTQHLSYSVDIRQELPDSVVVGISAATGRYSEQHALLSWSFSITPPSTDDKEKEGKPVMITLKGIGIGAVLFLSLLGMVEISLRMIAKRKEVGHTSKATSDPKMEDKLQMSTGPKKISYHELETATNNFDETNKLGHGGFAADENLLGEFDVKQMECLLVVGLWCANPDSASRPAIRQVINVLNSESSLPILPQQIPVS*


CDS Sequence:
>Vu_04009.1
ATGGCTGCTTCTGGATTACTGTTTAGGATCATTTTGTTCATCCTAATCATCGCCATTGCAATAACAAATGCTCACACTCAGTCTTTTGAGTGTCCCAACTTCAGTTCAACTTGTATAAAGCACCTTAAGCTAGAAGGGAGTGCTTCTACCTCAGGTTCTGCTATCCAACTCACAGAAGAGAACGCAATATCCCCAAGCAAATCGTTTGGGAGCGCAGGGCGAGTCACGTATGCTGAACGAATAAACCTTAGGGACAATAGTTCAAATGAACCAAGAGACTTCATTACCAACTTTTCCTTTGTTGTTTCCTCAAATCAGAGTATCTATGGAGATGGTTTGGCATTCTTCCTTGCAAGCCCAAATCTTCCATCCACAGATAAGTTACAGCTAAGAGGAGGAAGTCTTGGGGTTGGCCTAACGGATGGTAATCGTGAGCTCTTCTGGTTAGGTTATCGATTCCTGGCAGTGGAGTTTGACACTTTCAGAAACCCATGGGACCCAGTTGGTGCTCATGTAGGAATAAATATCAATGACATGGAGTCTAAAATTTTTGAGACATGGTGGATAGATATGACACATAGGAAGGTTTGTAACTGTAGTATTGTATACGATTCTAGGAACAGTATTTTGAATGTCTCTTACACTGGATACAAATTAAGCGATGGGAAAGTGAGAAAGACTACACAACATCTTTCATACTCTGTCGATATAAGGCAGGAATTACCAGACTCCGTTGTTGTTGGCATATCAGCTGCAACTGGAAGATATTCTGAACAGCATGCCTTGCTCTCATGGTCGTTTAGCATCACCCCACCAAGTACGGACGATAAAGAAAAGGAAGGGAAGCCTGTCATGATAACATTGAAGGGAATAGGAATTGGTGCTGTCTTGTTTTTGAGTTTGTTAGGAATGGTTGAGATTTCATTGAGGATGATTGCCAAGAGAAAGGAAGTAGGTCACACTTCAAAGGCCACTTCTGATCCAAAGATGGAAGATAAATTACAAATGAGCACTGGACCCAAGAAGATTAGCTATCATGAATTGGAAACTGCAACCAACAACTTTGATGAGACGAATAAGCTTGGGCATGGAGGGTTTGCAGCAGATGAAAACCTACTTGGGGAATTTGATGTGAAGCAAATGGAATGTTTACTGGTAGTTGGTCTTTGGTGTGCTAATCCAGATTCAGCATCCAGACCTGCAATAAGGCAAGTGATTAACGTCCTTAACTCTGAATCTTCTTTACCAATTCTTCCACAGCAGATCCCAGTTTCATGA


Promoter Sequence:
>Vu_04009::LG1:54488624-54490624(+)
TCTCTAATTTAATTCAAAATGCGAACACCATCCTCAATAAATTAAAAATAATTTAGAAAATCCATTTTTTATATAAATCAAGTTAGAATATATTTAGAATAAAATCAATAAGTTAGCATTAACTTATTTGACTAGCTTATAAGATGTATTTAACAAAATTGGTTGGTAAATAATTCTTTATGAATTAAGTAGTAGACTTCAATTCACAAGTCTGAATAAAGGGCTTCCAATACACATTTTGAATTTCAATGGTAACAAAATATGAGCCTTAAGCTGTTCATTAATTGACAACAGATTTACCAAGGACAACTTGTTGATCTTTCCAGAAAGCTGATAACTACTAACACTAATCAAACACAAAAGAAAAAAATATAAAAGAACAATAACAAAGCATGGTAAGGGAAGAGATGATGGCACCTTAAATTATTGCCTAGAACTATTCCTGTAGCAGCAAAACTCGGGTAACAGAGCTATATGATCAGAAGACCATTCAGGAGAAGAAGTGTTGTGTCTTTCCTCAAACTCTCCTCATCCAATAGCACCAACAATTACTCCACTTTTTGTATAAAGAGGCAGCACTGGCGGAGGCAGCACCGGCGGAGGCAGTGACGACAAAGGCAGCATCGGCGGAGGTTACAACGACGACAAAATAGTAACCTCGTTGGAGACAACGCAGGCAGCAGCGGCGGGACAACGCGATGGCGAAGGAGGGAGGCGCGACCAATAACAACAACCAGCAGCGACAACCGTGAGCACTGACAAGAAGGAGGAACGCAATGACTACGCAAGGAGTGGCAGTGGTGGACACAGAGCACAACGAAGAAGAAGCACGAGACCACAAGAGGAAGAAGAAGCTGTTGGGCGACGCAAATGAAACTGTGTAGCTTAAGGTCAGAAAATGGAGCTACTACCTCGGTTACTTTAAAACCCGAGGTAATAGCACAATATTGCACTGGTTAAAAGCAATAGCCGAAGTATAAAGTGCTCATCAACGACCTCGGTTCCTTGAAGAACCGATGCCTTAGGCCTGGCATAGCAGAGCTGTCAGTGGTTCAGGCGAAAAGCCTAACTTGCAGAGGATTTCAGGCGAAAAGCCTGACATGCACAAGTGTATAGGCATCGGTTGCCTAGTAAACCGAAGCAATAAGGCTTTTCAAAAAGTTGTCTCTGATTTGCAGTGATTTGTACAAAGGTATATGTCTCGGGTGTCTTATCAACCGAGGCAGTACAACCATTCCGCTTCGAGTGCACTCGTAATCGAGGTATATAGGGTTGTACGCTTCGGTTTTTCTTAAACGAAACATATATGGCGCCTTCGAAAGTATTTTTTTACTAGTGATAAGTCAAATTGACCGATCTAATCGCTCTAACTTTTATTCAAGGTCTAGCATAGTGAGAGAACAAAAATTTAGTTTGAAAGATTACTAGAAATACCCAAATTAAAGTGTATAAAATAATATCGTCATCTACCCCTTAAATTTTATATTATGTACCCTCTGTTAAAGAAAATAATTATGATATATTCATAATTAATAGTACCATTTGATTGGTAACTGGTTACTTAATTGTTTATAAAGACATAAGTGATTAGTTATTGTTATAAAAGGATCTTAACGACGGCACATGGAAGCTTTGTTTTCCAAAATAAGATACCGTGACAGAAAAAACTCACTTAAATAGTGGATCGTCTCTATCAAACTTTATCATTTCCATGAATACTACCGCTAACTAGCATAGCCATGTTTGTACGTAATTAATTACCATTTTCAATCACTTCGAATATTTGCTGTTTCACTGGCAGGCTCAGAACAATGGTTCTGATCCAGCTCCTTTTTTATACTTCGTGAATCCTATGTTCTCTTAGGAATATTCATCACAATGTTGGGGGTTGAGACAAATACCATTAACCTTATCCTGAGACAAAATACATATAATTTATCACACAACTTACAATGTGTGTGAGACTTCAAAAAATATCAAACTCAACTCTCGCTTACTAA


Gene Sequence:
>Vu_04009(+)
ATGGCTGCTTCTGGATTACTGTTTAGGATCATTTTGTTCATCCTAATCATCGCCATTGCAATAACAAATGCTCACACTCAGTCTTTTGAGTGTCCCAACTTCAGTTCAACTTGTATAAAGCACCTTAAGCTAGAAGGGAGTGCTTCTACCTCAGGTTCTGCTATCCAACTCACAGAAGAGAACGCAATATCCCCAAGCAAATCGTTTGGGAGCGCAGGGCGAGTCACGTATGCTGAACGAATAAACCTTAGGGACAATAGTTCAAATGAACCAAGAGACTTCATTACCAACTTTTCCTTTGTTGTTTCCTCAAATCAGAGTATCTATGGAGATGGTTTGGCATTCTTCCTTGCAAGCCCAAATCTTCCATCCACAGATAAGTTACAGCTAAGAGGAGGAAGTCTTGGGGTTGGCCTAACGGATGGTAATCGTGAGCTCTTCTGGTTAGGTTATCGATTCCTGGCAGTGGAGTTTGACACTTTCAGAAACCCATGGGACCCAGTTGGTGCTCATGTAGGAATAAATATCAATGACATGGAGTCTAAAATTTTTGAGACATGGTGGATAGATATGACACATAGGAAGGTTTGTAACTGTAGTATTGTATACGATTCTAGGAACAGTATTTTGAATGTCTCTTACACTGGATACAAATTAAGCGATGGGAAAGTGAGAAAGACTACACAACATCTTTCATACTCTGTCGATATAAGGCAGGAATTACCAGACTCCGTTGTTGTTGGCATATCAGCTGCAACTGGAAGATATTCTGAACAGCATGCCTTGCTCTCATGGTCGTTTAGCATCACCCCACCAAGTACGGACGATAAAGAAAAGGAAGGGAAGCCTGTCATGATAACATTGAAGGGAATAGGAATTGGTGCTGTCTTGTTTTTGAGTTTGTTAGGAATGGTTGAGATTTCATTGAGGATGATTGCCAAGAGAAAGGAAGTAGGTCACACTTCAAAGGCCACTTCTGATCCAAAGATGGAAGATAAATTACAAATGAGCACTGGACCCAAGAAGATTAGCTATCATGAATTGGAAACTGCAACCAACAACTTTGATGAGACGAATAAGCTTGGGCATGGAGGGTTTGGTGGTGTTTATAAAGGCTATTTCAAAGACTCCAACACCTATGCTGCTATAAAGAGGATATCAGCAGATTCTAAGCAGGGTGTAGAACAATACACTGCAGAAGTGACGATTATTAGCCAATTGAGGCACAGGAATTTGGTGAAACTCACTGGTTGGTGCCACAAGAAGAAAGATTTTCTCTTGATATACGAGTACATGGAAAATGGCAGCTTAGACTCTCAACTTTTTCGGGGAGAAAGTATATTACCCTTGGAAGTGAGGTACAACATAGCGTTGGGCTTGGCCTCAGCATTGCTTTACCTACAAGAAGAATGGGAGAAATGTGTGCTTCATAGGGACATCAAATCAAGCAACATAATGTTGGACTCCAACTTCAATCCCAAGCTTGGTGACTTTGGCCTAGCTAGGTTGGTGGATCATGATAAAGGGTCAGAAACCACAGACGTGGCTGGGACCATGGGTTACTTAGCTCCTGAGTACATGAACACAGGCCAGGCTCGAAAAGAGTCAGATATATTCAGTTTTGGGGTTGTTGTGTTGGAGATAGCCACTGGAAGAAAAGCCATTCACCACAAACACATGGAGGGTGAGGTATCAGTGGTTGAGTGGGTGTGGAAGCTATACGAATTGGGAAATCTGCTTGCAGCAGCAGATGAAAACCTACTTGGGGAATTTGATGTGAAGCAAATGGAATGTTTACTGGTAGTTGGTCTTTGGTGTGCTAATCCAGATTCAGCATCCAGACCTGCAATAAGGCAAGTGATTAACGTCCTTAACTCTGAATCTTCTTTACCAATTCTTCCACAGCAGATCCCAGTTTCATGA