Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03959 LG1 53774597 53778810 PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   negative regulation of cell death, defense response to bacterium, protein phosphorylation, defense response to bacterium, defense response to bacterium, protein phosphorylation, negative regulation of cell death, negative regulation of defense response, protein phosphorylation
Cellular Component   located in   plasmodesma, extracellular region, plasma membrane, plasma membrane, plasma membrane, plasma membrane
Molecular Function   enables   protein binding, protein binding, protein binding, protein binding, receptor serine/threonine kinase binding, identical protein binding, protein kinase activity, protein binding, protein binding, protein binding, protein binding, kinase activity, protein binding, protein kinase activity, receptor serine/threonine kinase binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, receptor serine/threonine kinase binding, protein binding, protein kinase activity, protein binding, receptor serine/threonine kinase binding
SNP Position Effect Amino acid change
G/T 53775522 splice_region_variant&intron_variant
T/A 53775568 intron_variant
T/A 53775589 intron_variant
A/T 53775590 intron_variant
A/G 53775601 intron_variant
A/G 53775664 intron_variant
A/G 53775762 intron_variant
A/G 53775909 intron_variant
G/A 53775931 intron_variant
A/G 53775971 intron_variant
C/T 53776038 intron_variant
T/A 53776521 intron_variant
A/T 53776612 intron_variant
G/A 53776781 intron_variant
G/A 53776854 intron_variant
G/T 53776867 intron_variant
G/A 53776873 intron_variant
A/G 53776898 missense_variant p.Lys245Glu
G/T 53776912 synonymous_variant p.Ser249Ser
C/T 53776914 missense_variant p.Thr250Met
C/G 53776933 synonymous_variant p.Val256Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_03959.1
MSTEMGSQIKRDIFIHVFLYSLLRSLMVGNGVESDISCLISIKDSLEDPFNYLSSWNFDNRTEGFICSFVGVLCWHPDENKVLGISLENMGLDHNKLSGHIPQELGQLPLIKSASFANNHLSGSVPLFFQDISSVDYANNGELCGGPLPPCSLDSSHDFPQSFKRGLATGYAFSVTSVIVIYMSYCAPWEQSHHQRNKHRKKAKELGTIFWSIAGRKTRTQAPAEHELQPLQLQEKVVKEISVVTKRMKSTMRFNEVRDATDCFSIDKAIGMGKIGIMYEGRLPNGWNLAIKRLFDSKQYKREFLLEIRILGKYRHRNIVPLLGFCVEGKERILVYQFMSNGRLSKWLHPLEGEVTLKWPQRIKVAIGVARGLSWIHHICNLHVVHLSISSECILLDKNFEPRLSNFGKAKFVNPNIEDGANTMFYVSDGKKDVYDFGSLLFELITGKTLKELSCSFSTATNLSGNPSNFVNAIDESLMGEGLENDVYTLIKVACKCVRPFADERPTMLEVYDTMKDIWVLHQVLQKKLSTELCVELFTDQTLHRALQALQAPFQIVRAIHKFFEAFIELLCGRPFHNSRLPG*


CDS Sequence:
>Vu_03959.1
ATGAGCACAGAAATGGGTTCTCAAATAAAGAGGGATATTTTCATCCATGTTTTCTTGTATTCTTTGCTAAGATCTCTAATGGTAGGTAATGGTGTTGAAAGCGACATCTCCTGCTTAATATCCATTAAGGATTCCTTAGAAGATCCTTTCAATTACTTATCAAGCTGGAACTTCGACAACAGAACCGAAGGTTTCATATGCAGTTTTGTGGGCGTTTTATGCTGGCATCCGGATGAGAATAAAGTGTTGGGTATCTCGCTGGAAAATATGGGGCTTGATCACAACAAGTTAAGTGGTCACATCCCTCAAGAACTTGGTCAGCTTCCCCTGATCAAATCAGCTTCTTTTGCCAACAATCATCTATCAGGGTCGGTGCCTTTGTTCTTTCAAGACATATCTTCTGTTGATTACGCAAATAATGGAGAGCTTTGTGGTGGGCCTTTGCCACCGTGTTCATTGGACAGCTCACATGATTTCCCTCAATCGTTCAAGCGGGGTCTTGCCACAGGCTATGCTTTTTCAGTGACTTCTGTTATTGTCATTTACATGTCCTACTGTGCACCTTGGGAACAATCACACCATCAAAGGAACAAGCACCGGAAGAAGGCTAAAGAATTAGGAACAATTTTTTGGTCCATTGCTGGGAGAAAGACACGTACTCAAGCTCCTGCCGAACACGAATTGCAACCTCTGCAGTTGCAGGAGAAAGTCGTCAAAGAGATTTCTGTAGTAACAAAGAGAATGAAGTCGACGATGAGGTTCAACGAAGTCAGAGATGCAACAGATTGCTTTTCCATAGACAAGGCCATTGGGATGGGGAAAATTGGAATAATGTACGAGGGAAGGCTACCCAATGGTTGGAACCTTGCCATTAAGAGACTATTCGATTCGAAACAATACAAGAGAGAGTTTCTTTTGGAAATAAGAATTCTGGGAAAGTACAGACACAGAAATATAGTTCCCTTACTTGGGTTCTGCGTAGAAGGAAAAGAAAGGATTTTGGTGTACCAGTTCATGTCAAATGGAAGGCTTTCAAAATGGTTGCATCCTTTAGAAGGTGAAGTTACATTGAAATGGCCTCAGAGGATCAAAGTAGCAATCGGGGTAGCAAGAGGCTTATCCTGGATTCACCACATATGCAACTTGCATGTTGTGCATCTCAGTATAAGTTCGGAGTGTATCTTGCTTGATAAGAATTTTGAACCAAGACTGTCCAACTTTGGAAAGGCAAAGTTTGTGAATCCGAACATTGAAGACGGTGCAAACACAATGTTTTATGTGAGTGATGGGAAGAAAGACGTGTATGACTTTGGTAGTTTGCTATTTGAGTTAATCACAGGGAAAACATTGAAGGAGTTGTCGTGTTCATTCAGTACTGCAACTAACCTATCTGGAAACCCTTCAAACTTTGTTAACGCAATTGATGAATCTCTGATGGGGGAAGGTTTGGAAAACGATGTGTACACTCTCATCAAAGTTGCATGCAAGTGTGTTCGACCATTCGCAGATGAAAGGCCAACGATGCTTGAAGTTTACGACACTATGAAGGATATATGGGTTCTGCACCAAGTTCTCCAGAAAAAGCTCTCCACCGAGCTCTGTGTTGAGCTCTTCACCGACCAAACTCTCCATCGAGCTTTGCAAGCTCTCCAAGCACCTTTTCAGATTGTTCGAGCTATCCATAAGTTCTTTGAAGCTTTCATTGAACTTCTGTGTGGTCGACCTTTCCATAATAGTCGACTGCCTGGTTGA


Promoter Sequence:
>Vu_03959::LG1:53772597-53774597(+)
CCTCAGCGGCCATTTGCCCCTCAGCGGTTCCAACGCCACCTCTTGAGTGCCGCTCAGCGGTAGTTTGCCGCTGAGCGGTGCCTTCGACTTCTCTTTTTGCACTCTTTCTTGTCTTTTCTAATGTCCTCTCTCTCATTCTTCACTTCTTTCACCAAATTCACCTCAAAACCTGCACAAAAAACACTCAAATCAAGTATAAACCTGTCCAGCTCTCTTATTTCTGAAAATATAAACAAAATGCATGATTTCAAGCTAGTTTCTAAGTCTAAAGGTTGCTTTTAGTATCACTTTTAAGCATGAAAATAACAGTTTTTCAACTGTTATCAGTAAACGATTACAACAGTGTTTTTTTTGTAGATTAGCCATGCACTTCTCCAACTTGGTCCCTTCAGTAAGAATGGCTTCTTCCCTACTTTTTGGAGTCACCTCCCATCACCTACCACCCTCTACCACCAGTCAAACACCAACACCAAGTAAATACAAGTGGACTTGTGCTTTAAATTAACAGTTTTTGCTAATGATCACCCAGGACACCACAACTGACTACTTTAGTTCAACTTTCTGTACAAAACAGTGATTTCTCTCGTGTAATCGTTTACGAGGCCACCGACAATGTTTTTTCTGCAGATTAGCTCTGCACTTGTCCAACTTGGTCCCCTCAGTAAGAATGGCTTCTTCCCCACTTCTTAGGGTCACCAAACATAACCTCCAAACCAGTAATGACCCTTAAATTCACTTGTATGGTTTTTTGGTCAACAAATTCCACAACTTATATTCATTTCTGAAACCATTACCTACATTTTAAATACTTATTAATATTCTGCAGTCTTTTTTCAATATAACACCTTTGTTCATTATAACACACATAACGTAAAAAGAATTAAATTCATGACACCCAAACCGCCACCAAACTTCGAATCAGAAAAAAAATACAAGAATAGGGTTAGAACGACAGAGAAGATAGAGGTTAGATCGAGAGAGAAGATAAAAGGGATGAAAGAAGTGTAGAGGTGAGAGCGAAAAAAAACGAAAACCGCGAAACCAAAAATGTTAAACTTGTAAACTTTTCTTCCAATTTTGCCCTTAGTATGATAACCTCTCTCTATTTTTTTTTATTAAATTTGACCAATGCAAAGACGCCACCTGACGTTGTCAAATTGTTGGCAAAAATCGACATATCATTTTCCCAGGGATAATACCACTGCAACCAAGATGGAAAAATAATTTATGTAAAATAAAAATAAAATAAAATATAAAAATATACATATCATGTACAATGAGAATATTTTTTCATAAATATTAGAGAGGTAACGTGCTAGATAACATATCAATTTCTTTCAAACATAACATGCAAGGACACTCTTTTTATCCGATCCCACCCATTGTGATCCTTAATATTCAGAAACTAAATGAGTTTAATTTTGTTACGCAATCTAATTTTTCTCCAACCTAACTTAAACAGTGCTCATAAGAAATAAAAGATCATATACGACTTCAACTTTCCCCAATCCGTCCAACGGATTAAATCATTCTATTTCCTTGAGATGAAATTCCAAACTCTGCATTTAAATATTTTGAAAACCTTAATATAATATTTATAATTTTCCAAAAACTCGTTCAAATGTGGCGAGTGGTCAACGTAATGGTCTTTGTACAGTGCAAACTGTACTGAAAAATTAGTGGTGAGAGTTTGAGAGTGATAGACAGACAAACTATAACCACGGAAAAATTAAGCCTCACTCTCCTTCTCTACAAGATTGACGTTTTCGTTAATATTAATAATTACTATCAAATATAAATAATGATTTGAATACTCTGGAGTGAATAAAATTCTATCAAATTAGGATTCGAATATTGTTTGAAGTTGGAGTTTCATTTCTGGCGTATTGAAAAGTATAATTGAAGAAAATTCAATTCCATTCTTCTCGTCTCTTAAATTCACTTTTCCAATCCTTCTCCTCTTCTTAACTTATCTTATATCAGAAAGGATCGTTTCTGCA


Gene Sequence:
>Vu_03959(+)
ATGAGCACAGAAATGGGTTCTCAAATAAAGAGGGATATTTTCATCCATGTTTTCTTGTATTCTTTGCTAAGATCTCTAATGGTAGGTAATGGTGTTGAAAGCGACATCTCCTGCTTAATATCCATTAAGGATTCCTTAGAAGATCCTTTCAATTACTTATCAAGCTGGAACTTCGACAACAGAACCGAAGGTTTCATATGCAGTTTTGTGGGCGTTTTATGCTGGCATCCGGATGAGAATAAAGTGTTGGGTATCTCGCTGGAAAATATGGGGTTGAAGGGTGAGTTTCCACTGGGAATTAGGAATTGCTCGTCATTAACAGCCTTAAGCCTTTCAAACAATCACCTAACAGGACCCATCCCCTCGGATATATCCACCTTAGTCCCTTATGCTACCTCCTTAGATCTCTCATATAACAAATTTAATGGAGTATTCCACCTACTTTGGCTAACTGCACTTACCTCAATTCTCTTAGGCTTGATCACAACAAGTTAAGTGGTCACATCCCTCAAGAACTTGGTCAGCTTCCCCTGATCAAATCAGCTTCTTTTGCCAACAATCATCTATCAGGGTCGGTGCCTTTGTTCTTTCAAGACATATCTTCTGTTGATTACGCAAATAATGGAGAGCTTTGTGGTGGGCCTTTGCCACCGTGTTCATTGGACAGCTCACATGATTTCCCTCAATCGTTCAAGCGGGGTCTTGCCACAGGCTATGCTTTTTCAGTGACTTCTGTTATTGTCATTTACATGTCCTACTGTGCACCTTGGGAACAATCACACCATCAAAGGAACAAGCACCGGAAGAAGGCTAAAGAATTAGGAACAATTTTTTGGTCCATTGCTGGGAGAAAGACACGTACTCAAGCTCCTGCCGAACACGAATTGCAACCTCTGCAGTTGCAGGAGAAAGTCGTCAAAGAGGTGCTGTCTGTCCCTACCATATCTGCTCTGGATCAAGTCTCTTTTGTTTTCAAGATATATTCATAAAAATATAAAAAAACCAATAAATATATAAAAACTAATTTTTCATTGGTATATATAATATATATATATGTTTAGTTATGTAAGGAGAATGGAAGATAATGTAATGGATTTTCAAAGGAGGATGTGCAGAAAATAGAACCAAATCACAAGGACTCAGTGAGACTAAAATGAATGGTTGAATGAATAACAATTGGATGTGTGCAAGCTAACTGGGTGAGATTCGGCTATAGACAGAATTATACTGATAAAACATGTAGGCTAGGCACAGTAGCTTTGGATGCAGGCAAACCAAAGGGGAAAAGGGACATCATTTTACTGGACCAAGTAAGCAAACAAATAATTCGTTCTGATTACAACACTTAAAGCATAACAGATATATCTGGAACAAAGACAAAATAGGCATAGTTACTGCATGCAGAGGGCACCTTGTGTCTATTGTTGATTAAGGAGGTTATCGGTGGAGGTTTCTAAGAGTCTAAAGGCAGAGCTACTGATGTTTTTATTTGAACAGAGCTAGTGATACATATGCCGACTGGATTTTCTTGTTTATGCTAAAGTCCACTGGTTATTACAATGTGATACTCAAATCAGAGCAAGTACACAAAGCTTTGTGGACTTATTAAAGAAGGAACATACCTGGTGTTTGAAAAGATATACATGGATATAACATTATATATCATAAGGTATAGACTAAGTATAAGATCAACAATGAATCGTATTGTTCCCAAAGAAAATGCAATGAGGCCCTGGATGGGTTTTCGCAGAATTTAAGGCAGAGGAATAAACCAAAGTTTGGTTTGTTGTTCGCGATATGACAAATGCAGTATGAAACAAGTAAAGTACAAGGCTAGATAAATGAATAGTCAGAAGAAGCTGCACAACAATAGTCTTGTCCCTTAAAAAAGGCCAACGTTAATGTAGTACCTAGATAATTGAAATCTAAGTTATATTGTATGCATGTTGAGGCAATGTAAACACTTTGTAAATAATGAACCGTGTATATATATAATTTGGGGGAAATAAAAAAATAAAAAGATTTTTTGTACTTTTTATGAAAATTGATTCATAAAATACTCTTTTATTAATTAGATTTTAGAAAGGAGATAATAATAAGCTAATACACAATATTGTCTTAAACTATTAAATTATCTCAGATAAACAGAAATTATGTTACGAAGTTTGGACAGAGAAAAGTAAGGATTAACTAGTTAAATGTCCATGAACTAAAATTATAGTAGTATTATTAATGTATTATAATGAGTTTTAGCAATGATTAATATGGTTGTGGTTGCATCAACAGATTTCTGTAGTAACAAAGAGAATGAAGTCGACGATGAGGTTCAACGAAGTCAGAGATGCAACAGATTGCTTTTCCATAGACAAGGCCATTGGGATGGGGAAAATTGGAATAATGTACGAGGGAAGGCTACCCAATGGTTGGAACCTTGCCATTAAGAGACTATTCGATTCGAAACAATACAAGAGAGAGTTTCTTTTGGAAATAAGAATTCTGGGAAAGTACAGACACAGAAATATAGTTCCCTTACTTGGGTTCTGCGTAGAAGGAAAAGAAAGGATTTTGGTGTACCAGTTCATGTCAAATGGAAGGCTTTCAAAATGGTTGCATCCTTTAGAAGGTGAAGTTACATTGAAATGGCCTCAGAGGATCAAAGTAGCAATCGGGGTAGCAAGAGGCTTATCCTGGATTCACCACATATGCAACTTGCATGTTGTGCATCTCAGTATAAGTTCGGAGTGTATCTTGCTTGATAAGAATTTTGAACCAAGACTGTCCAACTTTGGAAAGGCAAAGTTTGTGAATCCGAACATTGAAGACGGTGCAAACACAATGTTTTATGTGAGTGATGGGAAGAAAGACGTGTATGACTTTGGTAGTTTGCTATTTGAGTTAATCACAGGGAAAACATTGAAGGAGTTGTCGTGTTCATTCAGTACTGCAACTAACCTATCTGGAAACCCTTCAAACTTTGTTAACGCAATTGATGAATCTCTGATGGGGGAAGGTTTGGAAAACGATGTGTACACTCTCATCAAAGTTGCATGCAAGTGTGTTCGACCATTCGCAGATGAAAGGCCAACGATGCTTGAAGTTTACGACACTATGAAGGATATATGGGGTGAAGGACATTAATATAGTGATGGGTTCACCCACTCTACCTCGATATTTCTTCTTCTAGTATAGACAAACTTTTTTTCCTATAAGAACGGGCTTACCCATCTAACATTTGAAATTAGGATTTAAGGTTTATTGAGATATTATATACAAATTTTTTATATTCATTTCACCCTATTTTTTTATATTTTAAAAAAATTATATATATATATATATATATAATATATATATCATTTTATTTTTATTTTTATAATATGTGTTAAATAAATGGAAATGTCTCTCACTTTAATATATATTTTTTATTTTATTTTTAAGGTATGTTTCCTTTGGTTTCCAACTTACTACATTAAAGTTTCTCTTGTAAACTTCTATGTTGATTTCTTTTCTTTTGTTTAATGAACTAAAAAAACTGTTTTTTATTAACCATTTTTTTAGTGGTTATCTAAACTGATATAAATATTTTGATTTCTGTTAATTATTCTTAACTGTCACAATATTTTTTCATGTTATTTTAAATTTAGTTATATTAACTTAATCAGTAGATTAAATCTGATTTGAATATTTTCAATCCTTGTCTGTCTTTATAATTCTACAGATTCAGAAATATGCAAATCTATTGTGTTTAAATCTAATGTGTTTTCCTCTATTCATCCTATGATCTATGATCTCCTACGTCTACTCTTCTCTAGTGCATGTTTGCCTAAAATTTCTAGAAATTTGTTCAGGTAATCTTCAATATAAGATTTTCGAAAGCTTCTTGAGGTAATTTCTTCATATTGGAAGCGAGATTTCATATTTCAAGTCAGATTTTCTCTTTCCCTAGGTTAATATGCCCTTTTCCCCGAAGAGAGAGGAACTGACAACTCAGTTGACTTTGAGCTCTCTACACGTTCTTTCAAGTTCTGCACCAAGTTCTCCAGAAAAAGCTCTCCACCGAGCTCTGTGTTGAGCTCTTCACCGACCAAACTCTCCATCGAGCTTTGCAAGCTCTCCAAGCACCTTTTCAGATTGTTCGAGCTATCCATAAGTTCTTTGAAGCTTTCATTGAACTTCTGTGTGGTCGACCTTTCCATAATAGTCGACTGCCTGGTTGA