Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03930 LG1 53293426 53297190 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1
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Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, protein phosphorylation, protein phosphorylation, protein phosphorylation, recognition of pollen, recognition of pollen, protein phosphorylation, recognition of pollen, protein phosphorylation, recognition of pollen
Cellular Component   is active in   plasma membrane
Cellular Component   located in   extracellular region, extracellular region, extracellular region
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, calmodulin binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
C/G 53295257 intron_variant
G/A 53295330 intron_variant
T/C 53295331 intron_variant
A/T 53295378 intron_variant
A/G 53295394 intron_variant
C/T 53295410 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_03930.1
MNQTHKHKICMLSSLILLFTFHFCSCSDTISSDKAIRDGELLVSKGKTFALGFFSPGKSKSRYVGIWFNNVQEQTVVWVANRDTPINDTSGVLSINPDGNLVLHHNYSTSPIWSTSVSLTQSNSTATDVIAQLSDLANLLLILNDTKTLIWQSFDHPTDTLIPYLRIGFDRKANQSWILQSWKTDDDPGTGSYTLELSSTGKAQLFLYHQNLPLWRGGSWNGELFMGVPNMKRDLLTFNVSFTENENLVALSFNPRDKSLITWVVVQQSGFFNVFTRDKQKNQWNRYWSVPINQCDNYGTCGSNGNCDPLNFEEFRCTCLPGFEPKSSHEWYNNRDGSEGCVRKKGVSVCGNGEGFVKLEGLKLPDTSEATAKEGWSLDECEKDCLRNCSCTAYAVLDVRNGGSGCLAWHGNLTDIQKLSDQGQDLFVRVDAEELANYNKKTKGLRGKMRIAVIVTASAVASIIILFALYFRWKKKTKDEKRRSSLTWDKRGYMAPEYAMDGRYSTKSDVFSFGVLLLEIIAGKRNTDCERGRSSRNLIGHVWILWTEGRALDIVDSTLGESYSPAFVLRCIQIGLLCVQENAAYRPSLSEVVFMLGNETSLSRPQKPAFLLNGDLAESSTSGGGSSINEITATTVSAR*


CDS Sequence:
>Vu_03930.1
ATGAACCAAACCCATAAGCATAAAATATGTATGCTAAGCTCCTTGATTCTACTCTTCACCTTCCATTTTTGTTCTTGTTCTGATACCATATCTTCTGACAAAGCCATCAGAGATGGCGAGCTTCTTGTTTCCAAAGGCAAAACCTTTGCTCTTGGGTTTTTCAGTCCAGGAAAATCCAAATCCCGCTATGTGGGAATATGGTTCAACAACGTTCAAGAACAAACTGTTGTTTGGGTTGCAAACAGAGACACTCCCATCAATGACACCTCTGGGGTTCTCTCAATCAACCCAGATGGAAACCTAGTCCTCCACCACAACTATAGCACTAGTCCCATTTGGTCTACCAGTGTTTCACTCACACAATCAAATAGCACTGCCACTGACGTCATAGCTCAACTCTCAGACCTAGCAAACCTTCTTCTGATTCTTAACGACACCAAAACTCTCATCTGGCAAAGCTTTGATCATCCCACAGACACCTTGATTCCATATCTAAGAATTGGTTTCGACAGAAAAGCTAACCAGAGTTGGATCCTCCAATCTTGGAAGACAGATGATGACCCCGGAACAGGTTCTTACACATTGGAACTGAGCAGCACTGGGAAGGCACAGTTGTTCTTGTATCACCAGAACCTTCCCCTGTGGCGAGGTGGATCATGGAACGGTGAATTATTTATGGGTGTACCCAACATGAAAAGAGATTTGCTTACTTTTAATGTTTCTTTTACTGAAAACGAAAACCTCGTAGCTCTCTCATTTAACCCGCGCGATAAGTCCTTGATCACTTGGGTGGTAGTCCAGCAATCAGGTTTCTTTAACGTATTCACTCGGGATAAGCAAAAGAATCAGTGGAACAGGTACTGGTCTGTGCCAATAAACCAATGTGATAACTATGGAACCTGTGGATCAAACGGTAATTGTGACCCTTTGAACTTTGAGGAATTTCGGTGTACTTGTCTACCTGGGTTTGAACCCAAATCCTCACATGAGTGGTACAATAACAGAGATGGGTCAGAAGGGTGCGTGAGGAAGAAAGGTGTATCCGTTTGTGGGAATGGAGAAGGGTTTGTGAAACTTGAAGGCTTAAAGCTGCCTGATACCTCTGAGGCAACTGCCAAAGAGGGTTGGAGTTTGGACGAGTGTGAGAAGGATTGCTTGAGAAACTGCTCTTGCACTGCTTATGCAGTTCTTGATGTGAGGAATGGTGGAAGTGGGTGCTTGGCATGGCATGGAAATTTAACAGACATACAAAAACTGAGTGATCAAGGCCAAGATTTGTTTGTCCGTGTTGATGCAGAAGAACTAGCAAATTATAACAAAAAGACAAAAGGATTACGCGGTAAAATGAGGATTGCTGTAATTGTGACTGCTTCTGCAGTAGCAAGTATCATTATCCTCTTCGCTCTGTATTTCCGGTGGAAGAAGAAAACCAAAGATGAAAAGCGAAGGTCATCACTGACTTGGGATAAGCGTGGCTATATGGCACCAGAATATGCCATGGATGGACGGTATTCAACAAAATCTGACGTCTTTAGTTTCGGGGTCTTACTCCTGGAGATTATTGCTGGCAAGAGAAATACAGACTGTGAAAGGGGAAGATCCTCCCGAAATTTAATTGGACATGTTTGGATACTGTGGACAGAAGGAAGGGCGTTGGATATAGTTGATTCAACACTGGGTGAGTCTTATTCTCCAGCTTTTGTTCTGAGGTGCATTCAGATTGGTCTATTGTGCGTGCAAGAAAATGCAGCGTATAGACCTTCATTGTCAGAAGTTGTTTTCATGCTAGGCAACGAAACAAGTCTTTCCCGTCCCCAAAAGCCAGCATTTTTACTGAATGGAGATTTGGCCGAGTCATCAACATCAGGTGGTGGATCTTCAATAAATGAAATAACAGCAACTACTGTGAGTGCTCGTTAG


Promoter Sequence:
>Vu_03930::LG1:53291426-53293426(+)
GTTAGAGATTTGTTTTTAGATGTTTCTTAGTGCGTAAGAGGTTATAGGAACCATTCAAACTTGGGTAGATGGTCACCAAAGAGAGTTTTAAAACCTCGTGTAGCGCCCAGGCGCCCCCAAGAACCCTCTTAGCAGCCCTCATTCCAGTGGCCTGACATGTGAGCGTCCTGTTTGGGGGAGCTAAGCACCCCTAAGCCAAACTTTGGATTTTCAATTTTTGGCATGTTTTGGGATGTACTGTTTTGGTCTCTATGATGCATGTGTGATAATTTAGCATGAGCTTTATGGTGATGTATACAGTGTTATGTCTACTTGTTTATTAAATGGAAAAGGTATGGAAATGAGTTCTAAGGAGAAACTTTTCTTGGTGTGGTTTCAAGTATTATTAGTATGAATGCAGGGAGCTCAGTCTTGAAGGTTATCCTAACGCTATAATGGTATTTCATTATCAAGTAGAGAAGATTGACACATGTGGTCAAAGTAACAGGAGGTCTTAGTCTAGGTGCTTTCAGTATGGCCTACGACGTGGTACAAACTAACCTTGTGAGTGTGGTAGGGTGAAACCCATTGACAATGACTTTGCAAAGTAGTAGAGGCCACTGCACAATCCATCATAGCTCAACATTCATTCTAAGTCTGGATAGTCTAGTCTAGGTCATTGTATGTTAAGATGTTTGGTTTGATTTATATTATATCTTATATATGTATGAATTACTTTAAGTTTATGAGGAATTGTTTTTGTATCTAGCTTACCTTTTATTTTTTTATTGTGGTTGTATGTTTCTTTGCTTCTTTTCTGACTATGATCATCCGGTGGGTGTGAGCAGAAAGAAATGATGTTTCTTTGAAGCAGACGTTAGATGAAGGTGTTGCAGATGTTTAATATCTTTACTTAGCTATCTTATATATAGTTTTGTTTAACTAGTTTGTATATAAAGTTCCTTTATAATTATTTGGATGACTAATCTATCTTATTAAAAATAGTAATGACTATATAATAATTATAATGTATTTCGGGATGTTACAAACAACGCTTTAAACATATTCTTTCTAGAAAATATCAACACTTCCTTAAAATTACAAAGATAAGGGATTGCTATAAAAAAAATCAGCTTACGCATGTCTTATTACAAAAATTTCATCAAAAATATTTTTTTATAGAAAACTTCTATAAATAATGTTTAAGAAGGAAAGATCCATGGCAAAAACTTTGGAGTTGTGTGATTCTTCTTCCTCTACTAATTCTTTTTGTGTGAAATGTGCATTCAATGTTCTTGAATAAGCATTAAACTTGCGTTAATAATTTGACAGTATCTCTTAAACACAACAAATTTTTATTAGCATAAATAGGTAGCTTTTTTCCATTTTTTTAGGAAGATGCATGATCTTGTACAGGTGGCTAACTCTACAATATCTTATCTCACATTTTTCAAAAAAGTCTTACGTATGAATATCTTTCAACATGTTTTTTTAAAAAATTTATTGCTGATAAAATATTGCGAGATCCAAAAAATAAAAATAAACAAAGAAGCATGCATACATTCCTTACCAACATTAAATAAAAGTTTATTAGGTTTGACATATACTGTACCATTGTATGTCGAATAAAAAACTTAAAAAATAATGTATAATTGCTTGCAATCAAATACTTATCAGACAAACAACATAAAGACAACTTTTATGTTTGTAAAATAAAACTCATTAAACAAAGTTCAACTTAGGTCTGGTTAATAAAGTAGACATTTTACATATGACATAATCTAATTTATAAAAAGATATATTTTAAACTTAGTCGTTCAAACACAATTAAAATTAAACCAAGCTCGCTTTTAACTTGGATCTAACACAAAATAATTAATATCTATAGAAAATATTTAACAATAGAAATTCAGATTTTGGTGCCAACCACGTTTCCTTCTCATATAATGCAGGAGGTGGTATGAAACGAAATTGACAGGGTAACACTATGCACTAACCCAAAAACACTCCGAGTTTTGCGA


Gene Sequence:
>Vu_03930(+)
ATGAACCAAACCCATAAGCATAAAATATGTATGCTAAGCTCCTTGATTCTACTCTTCACCTTCCATTTTTGTTCTTGTTCTGATACCATATCTTCTGACAAAGCCATCAGAGATGGCGAGCTTCTTGTTTCCAAAGGCAAAACCTTTGCTCTTGGGTTTTTCAGTCCAGGAAAATCCAAATCCCGCTATGTGGGAATATGGTTCAACAACGTTCAAGAACAAACTGTTGTTTGGGTTGCAAACAGAGACACTCCCATCAATGACACCTCTGGGGTTCTCTCAATCAACCCAGATGGAAACCTAGTCCTCCACCACAACTATAGCACTAGTCCCATTTGGTCTACCAGTGTTTCACTCACACAATCAAATAGCACTGCCACTGACGTCATAGCTCAACTCTCAGACCTAGCAAACCTTCTTCTGATTCTTAACGACACCAAAACTCTCATCTGGCAAAGCTTTGATCATCCCACAGACACCTTGATTCCATATCTAAGAATTGGTTTCGACAGAAAAGCTAACCAGAGTTGGATCCTCCAATCTTGGAAGACAGATGATGACCCCGGAACAGGTTCTTACACATTGGAACTGAGCAGCACTGGGAAGGCACAGTTGTTCTTGTATCACCAGAACCTTCCCCTGTGGCGAGGTGGATCATGGAACGGTGAATTATTTATGGGTGTACCCAACATGAAAAGAGATTTGCTTACTTTTAATGTTTCTTTTACTGAAAACGAAAACCTCGTAGCTCTCTCATTTAACCCGCGCGATAAGTCCTTGATCACTTGGGTGGTAGTCCAGCAATCAGGTTTCTTTAACGTATTCACTCGGGATAAGCAAAAGAATCAGTGGAACAGGTACTGGTCTGTGCCAATAAACCAATGTGATAACTATGGAACCTGTGGATCAAACGGTAATTGTGACCCTTTGAACTTTGAGGAATTTCGGTGTACTTGTCTACCTGGGTTTGAACCCAAATCCTCACATGAGTGGTACAATAACAGAGATGGGTCAGAAGGGTGCGTGAGGAAGAAAGGTGTATCCGTTTGTGGGAATGGAGAAGGGTTTGTGAAACTTGAAGGCTTAAAGCTGCCTGATACCTCTGAGGCAACTGCCAAAGAGGGTTGGAGTTTGGACGAGTGTGAGAAGGATTGCTTGAGAAACTGCTCTTGCACTGCTTATGCAGTTCTTGATGTGAGGAATGGTGGAAGTGGGTGCTTGGCATGGCATGGAAATTTAACAGACATACAAAAACTGAGTGATCAAGGCCAAGATTTGTTTGTCCGTGTTGATGCAGAAGAACTAGGTACTTCCTCCCACTATTTTTTTCTCTGTATGAATTTAACACCACACATATATTTTAACATTCTGCTTCAACCTATCTGAAATGTTTCTTCTTGTCAGCAAATTATAACAAAAAGACAAAAGGATTACGCGGTAAAATGAGGATTGCTGTAATTGTGACTGCTTCTGCAGTAGCAAGTATCATTATCCTCTTCGCTCTGTATTTCCGGTGGAAGAAGAAAACCAAAGGTTAGTGTTCTGTTCTTTATAATTATTATTTAAAAACAAGAATTAAAATAAGTGCATGTCAACAACATAGGAATAAGAATTAAAATAATAACACATGCCAACAACATATGAACAAGAATTAAAATAAGAGCATATCAATAAAGAAAGCAACATGAACATAAAATGTCTTAAAAAACAATTACAAGTGATGCAACTAATGAAACTAAAAAAAATAGAAAACATGGTTAAGAAATAGAAATGGAGAACACCCACTTTATAAGACTTACAAGAAAGAAAGTCACTCTGTGAAGGAACAAATCTCTTAAAAAATCTGAGTTTCTTATTCACTCTAGAGTATTTTTATAAGAGCCAACCTGACTATATATAACCGTGTTGATGCTGAAATTCAAATGGAAATTAAGAGGAAAATTTAAATTTAAATGTTAGACATTCCATACTTGATTGTGGTTTTCATTCTCCTCCAAACACTATGTTTTCAATGTGCTTTCTGAAACTCTTGTTTCCTCTTTCTTTGATTGGCAGTTTAATTGAGCTTGATTGAATTTTGAATTGAAGTCTAATTTTAATCCAAACTACAACTACATATCTAGTTGTAGAAACAAAACATTTTTATTCTTTAATAAGTAATACTGATATATCAGGTATTATATATATGTTAACTCCATTCACTAAATTCTTCTGCACCTTTCTTTTATTATTTAAGAATGTGGTGGGTTATATTGCTTCAAGTTATATCTCAAGGCATTTATAATTTCAGATAAAGTGATGCATCATTTAAACCAATTTTCCCCTGGACATGACAATGGTATCCAAAGCAGCACGCATAGAAATCTTCCGTTTTTCAGCCTTAAAGTGATAATGGAAGCCGCAAGAAATTTTAGTGATGAGAACAAGCTTGGGCAAGGTGGATTTGGTTCTGTCTACAAGGTAACTCAAACTCCATCATGCTTGAGCAACTGTTGTGAGAAGTGTCTTTTATGTCTTTAGTTTTCCTTGAATAGAAATTGTTGAAAAATGATGAAAAAAAAAAGTGAAATGGGGTTGAAGAGTTATAAACATTTCAGGGCTGTCTAGCCAATGGACAAGAGATAGCAGTGAAAAGATTGTCGGAACATTCAGGTCAAGGGACCGAAGAGTTTAAAACTGAAGTTACATTGTTAGTTAAACTTCAACACAGAAATCTAGTGAGGCTGCTCGGTTGTTGCTTTGAAAAAGAAGAAAGGATGTTAGTTTATGAATATTTACCAAATAAAAGCTTGGACTTCTTCATATTCGGTTTGTCTTTCTCTACTCTCTCTTTATTACAAAGAAAATGTTATACTCCTGTTTCATTTCACTTCTTTATGCATATCTGAGAGTTTGAACGCTAAATTCAGATGAAAAGCGAAGGTCATCACTGACTTGGGATAAGCGGTTTGAAATCATTTTGGGGATTGCTCGAGGTATTCTATATCTTCATCAAGATTCAAGGCTGAAAATAATTCATAGAGATCTAAAAGCAAGCAATGTACTCCTTGATGCTGCAATGAATCCCAAGATCTCAGATTTCGGTATGGCTAGAATATTTGGAGAAGATCAAATCCAAGCAAGGACGAGAAGAGTAGTCGGAACATAGTAGGTGTATTATTCATGTAAAGACTGCTGTTATTAATATGTATTATTTATAATGTTTTAATGGTTTTTGCATGTAGTGGCTATATGGCACCAGAATATGCCATGGATGGACGGTATTCAACAAAATCTGACGTCTTTAGTTTCGGGGTCTTACTCCTGGAGATTATTGCTGGCAAGAGAAATACAGACTGTGAAAGGGGAAGATCCTCCCGAAATTTAATTGGACATGTAAGTTGAGAAAGAGTAGTCATTAAAAGTGGCTAACAAAATTATTTTGGCATTATCAGTGAGTGGTTAATTTAGTGATTATGTTATAAGTAGGTTTGGATACTGTGGACAGAAGGAAGGGCGTTGGATATAGTTGATTCAACACTGGGTGAGTCTTATTCTCCAGCTTTTGTTCTGAGGTGCATTCAGATTGGTCTATTGTGCGTGCAAGAAAATGCAGCGTATAGACCTTCATTGTCAGAAGTTGTTTTCATGCTAGGCAACGAAACAAGTCTTTCCCGTCCCCAAAAGCCAGCATTTTTACTGAATGGAGATTTGGCCGAGTCATCAACATCAGGTGGTGGATCTTCAATAAATGAAATAACAGCAACTACTGTGAGTGCTCGTTAG