Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03919 LG1 53137343 53138701 PREDICTED: myb-related protein 330-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, response to osmotic stress, response to osmotic stress, response to wounding
Cellular Component   located in   nucleus
Molecular Function   enables   DNA-binding transcription factor activity
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
C/T 53137510 intron_variant
C/A 53137539 intron_variant
T/C 53137829 intron_variant
C/T 53137887 stop_gained p.Gln58*
C/A 53137971 missense_variant p.Gln86Lys
C/A 53138195 missense_variant p.His160Gln
A/T 53138242 missense_variant p.Gln176Leu
T/A 53138306 missense_variant p.Ser197Arg

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_03919.1
MGRSPCCDKNGLKKGPWTTEEDQKLVDYIQKHGYGNWRVLPKNAGMWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHRPRLDLLDLSSILSSSLYGPTHMNIQRLLGTQTMVNPELLKLASSLFSSQHRENVNVCPQNCEYNLLCDPQINQIPHLVQTQDFAQKPCKTPDDIDTMNPPCSSLSMPFAQEQFLECNMNPYPSVFHDSSFQQHSQPSELQCNVIDTSYVAQLPSYNYHGSDYDANLMDPSESSTYNNHSHNSNQNFSFASVISTPSSSPTPLNSNSTYVNGSSSTEDEIESYVSSNLLRLIEMPDMLGVNEFI*


CDS Sequence:
>Vu_03919.1
ATGGGTAGATCACCTTGTTGTGACAAAAATGGCCTCAAGAAAGGACCCTGGACAACAGAAGAAGACCAGAAACTCGTTGATTACATTCAGAAACATGGCTACGGCAATTGGAGAGTACTTCCAAAGAATGCTGGTATGTGGTCGGCTATTGCTTCTCGTTTGCCTGGAAGAACAGACAATGAAATCAAGAATTACTGGAACACCCACATTAGAAAAAGGCTTCTGAGGATGGGAATTGACCCTGTAACGCATAGGCCAAGGCTTGATCTTTTGGACCTCTCTTCCATCCTAAGTTCATCCCTTTATGGTCCGACACACATGAACATCCAAAGACTCCTCGGTACACAGACAATGGTGAACCCTGAACTTTTAAAGCTTGCTTCATCGCTCTTTTCTTCTCAGCATCGTGAAAACGTCAACGTCTGTCCACAAAATTGTGAATACAACTTGCTCTGTGATCCACAAATTAACCAAATCCCACACCTGGTACAGACTCAGGACTTTGCTCAAAAACCATGTAAAACACCAGACGATATCGATACAATGAATCCCCCTTGTTCTTCCTTGTCAATGCCTTTCGCTCAAGAACAGTTTCTTGAATGCAATATGAACCCTTACCCTTCTGTTTTCCATGACTCCTCCTTCCAACAACATTCTCAACCAAGTGAATTACAATGCAACGTAATCGATACTAGCTATGTTGCTCAATTACCAAGCTATAACTACCATGGCTCTGATTATGACGCAAATCTTATGGACCCTTCCGAATCCTCAACCTATAATAACCATTCCCATAACAGCAATCAGAACTTCAGCTTTGCTTCGGTTATCTCAACGCCTTCGTCAAGCCCCACGCCGTTAAATTCGAACTCGACGTACGTCAATGGAAGTAGCAGTACTGAGGATGAGATAGAAAGCTATGTGAGCAGCAACTTGTTGAGATTAATTGAAATGCCAGACATGTTAGGTGTTAATGAGTTCATATAA


Promoter Sequence:
>Vu_03919::LG1:53135343-53137343(+)
TTGAAAAAATGGGTTAAATATTGAGTATGAAAATAACACCACGAGAGAACATGTGCAATGAATTACGCGTGCGATTGATTTTTAAAGTATGTTTTTACATTTTGTACAGAGTTATTGAAAAATAAGAAATTATATTATTGTTATAAAATATTGAGAAAAGAAAACCTGGAGTTCTTAAATGATTGATTTGGTGGTGAAAAAGGTTAGGGTTGTCGGATGCTCTTCCTATTCCGACCCGCACTATTCCTTCTCCTTCTGTTCCAGTTCAGACTGGGAACTCAGAAAATAAATTAAAACGTGTTATTTAACTTTCAGTCAAACACAAACAAAATCCCAACTTTGACTACGCCTGAAACACACTCACATCTCTATAGGGGCGGTGATCGACACGACAAAATTGTTCTCTTCAAATATTCATTCAACTATGTTATCATCACTACAACAAAATGGACGAGAAAAACATGTTTTAAGGCCTTTTCTTTTATACCTTTTTCTGTTACTCTAATATTTAATAAGTAATGCGTAAAAGAGATAATAATGCAACATCTGAATTTGTACGTCGACTTGGAGCATTTCCATTCGACACACGCATGCACGTTGCCATGCATTTCTCAACCAACAGTGCTTCGGTTTTAACCAACGACAATGGTGGCTTTGAGCTTTGAGGTGGACGAGACTGATAACTATGAGCGTTGAGACCATAAAATTATTGCTATAAATCAGTGTACCTTAGTTTCATATATTTGATACACGATTTAATCTCATATAAATTAGAGTAAGGTTAAGATTTCTAACTTTTTTCAGTAAATATTGAAATTGTGCTTTAAAATAAAACTTCAATTTAAAGGTATCTTTTTGATTGAAACTGGTGAAAACACAACGTTTTTATAATTTAAAAAGATAATAAATTATAGTTATAAAAATAAATATAAATAACTTTTGCAATTTCATTATAGATAATACTTATTTATTTTATATATGATATTTTTTATTTAATTCAAAGAAAGTGGTTATATTTTAAAAAAAAGGATTAAATTTTTAAAAATATTACTTGAAAGGTAAAATTAAAAAAAAATGTAGATATAAAAAAATGAATCATATTTATTGACTTTTTGGGTGATTTGACTTTTAGCATAAATGTTTCCGTCTTAAAAAATATAAGAAAATGGAAATCGCAACATTAAATTTGGCTTCTATAATTAATAAAATATAAAACGAGATAACTTTCATGAAACTTAATTTTTTCATTTCTAAAACATATTTTGGATCCGTTAACTCATTTCTTTCCGTTTATCATATATCAAACACAAGACCTTGTTTATAACAGACTAGATTCCCTACAGCATTAATAAAAAAGTTATTGGTATCTTAAGATTAATCACATATATATATATATATATATATATATATATGTAATTATACATTTGAGAATTATTTTTACATAAGTAAGTATAAATCAGAAGTAAATAAGAAGATTTCCTCTGCAACATGGAATCCGAAAGAAAGACATGTGTTGTTGGGGGGTACGTGGCCTGCGATGTGTTGATTTACAGCTAATATGAATCTAGAAAGCTAAGCGTCACACTTTCCGGAAAACGATGGTTTGACTCCTGGATAATGTTAGAAGTAAATCAGAAATGTACGAATACGAAGCGCACATATGAAAACAACATCAAATTTCAACGTGTGCAGAAAAAGTAAAGATGTTATTTTTTTCCAGTAAACTTGTGATTTGCAATGCAAGATGGAAATAAACAGCAAGCACGTAAGGAAAATTTAATAAAGGATAGCAAAAGAAGACACGTAGCAGAAGAGATAACAGAGGCCGGCACCAAATCCAATTGACTTCTCCTTTTTCTTACCCTTCTTCTCTTTAATTGCTATTTATACAACAGCCAAGTACGTTCCTCTCAGTCTCGTACAAAACATCACAATTAACCCTTTCTCTATTTTCTCACATCTCTTCATCACGCCAACTTCAAAACCGAGAGAGCTACCAA


Gene Sequence:
>Vu_03919(+)
ATGGGTAGATCACCTTGTTGTGACAAAAATGGCCTCAAGAAAGGACCCTGGACAACAGAAGAAGACCAGAAACTCGTTGATTACATTCAGAAACATGGCTACGGCAATTGGAGAGTACTTCCAAAGAATGCTGGTATGTCATCTTTTCTAACAAAAATTAACATTATCACGCACACGCACCAAAAACTACCTTTTGCCTTTTGTTGTACACTTTTTGTACTTGAGCTAACATAAATTGCTTTTGCTTTTTTTTCTTCTTGCTGAATAGGGTTGCAGAGGTGTGGCAAGAGTTGTCGCCTCCGATGGACAAACTATCTCCGACCAGATATAAAGCGTGGTCGATTCACTTTTGAAGAGGAAGAGACCATAATACAACTACATAGCATTCTCGGAAACAAGTAAGTCTCTTGGTTAATATGTTGCTTTTGTCAGCATGAGTCAAATGTTGTTATTCATTAAAGTGATGAAAGAAAGGGTTTTGTAACTTGGTATGTTTGGATTGTGTGTAGGTGGTCGGCTATTGCTTCTCGTTTGCCTGGAAGAACAGACAATGAAATCAAGAATTACTGGAACACCCACATTAGAAAAAGGCTTCTGAGGATGGGAATTGACCCTGTAACGCATAGGCCAAGGCTTGATCTTTTGGACCTCTCTTCCATCCTAAGTTCATCCCTTTATGGTCCGACACACATGAACATCCAAAGACTCCTCGGTACACAGACAATGGTGAACCCTGAACTTTTAAAGCTTGCTTCATCGCTCTTTTCTTCTCAGCATCGTGAAAACGTCAACGTCTGTCCACAAAATTGTGAATACAACTTGCTCTGTGATCCACAAATTAACCAAATCCCACACCTGGTACAGACTCAGGACTTTGCTCAAAAACCATGTAAAACACCAGACGATATCGATACAATGAATCCCCCTTGTTCTTCCTTGTCAATGCCTTTCGCTCAAGAACAGTTTCTTGAATGCAATATGAACCCTTACCCTTCTGTTTTCCATGACTCCTCCTTCCAACAACATTCTCAACCAAGTGAATTACAATGCAACGTAATCGATACTAGCTATGTTGCTCAATTACCAAGCTATAACTACCATGGCTCTGATTATGACGCAAATCTTATGGACCCTTCCGAATCCTCAACCTATAATAACCATTCCCATAACAGCAATCAGAACTTCAGCTTTGCTTCGGTTATCTCAACGCCTTCGTCAAGCCCCACGCCGTTAAATTCGAACTCGACGTACGTCAATGGAAGTAGCAGTACTGAGGATGAGATAGAAAGCTATGTGAGCAGCAACTTGTTGAGATTAATTGAAATGCCAGACATGTTAGGTGTTAATGAGTTCATATAA