Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03862 LG1 52293430 52294386 PREDICTED: dof zinc finger protein DOF3.4-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 52293461 missense_variant p.Ser11Asn
T/A 52293472 missense_variant p.Trp15Arg
C/A 52293523 missense_variant p.Leu32Met
C/T 52293535 stop_gained p.Gln36*
G/C,* 52293982 missense_variant p.Ala185Pro
C/T 52294157 missense_variant p.Ser243Leu
A/G 52294260 synonymous_variant p.Pro277Pro
G/T 52294362 missense_variant p.Trp311Cys
T/A 52294371 synonymous_variant p.Ser314Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_03862.1
MGLSSKQVSSSGLDWKQTLLEAQDLELPKPNLMRKQQQQQQQQTQPSESLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVKKPNTPTPSSTTATTTPTTASPSTCTATVTTSIGNMDALLGSSHMTIQTPLADDQKHMASSLYQALIRPPPLLLQQNLMNARDLDGKDFGIGIGIGNNGIFPSSTLPLPHQSQSLLFPFSTSSSSFDTNPCSVSTSLRSSNVYNYGEEFKAAEESTINSTSIAPSTGGTNTQPWEIAATSGVGLGTSNFWNWEDFDSLVSTDLKDPWDDSDIKP*


CDS Sequence:
>Vu_03862.1
ATGGGTTTGAGTTCTAAGCAGGTTTCTAGCAGTGGACTTGATTGGAAACAAACCTTATTGGAGGCTCAGGACTTGGAACTCCCAAAGCCTAATCTGATGAGGAAACAACAGCAGCAGCAGCAGCAGCAAACTCAGCCTTCAGAGTCTTTGAAGTGCCCGAGATGTGACTCAACCAACACCAAGTTTTGTTACTACAACAATTACAACAAGTCTCAGCCTCGCCATTTCTGCAGGGCTTGCAAGAGGCACTGGACTAAAGGTGGAACTCTACGAAATGTTCCGGTGGGTGGTGGAAGGAAGAACAAGAGGGTCAAAAAACCAAACACTCCAACACCTTCTTCCACCACTGCCACTACCACCCCGACAACAGCCAGCCCTTCTACTTGCACTGCCACCGTCACAACCTCAATTGGCAACATGGATGCTTTGCTGGGTAGTAGCCACATGACAATTCAAACTCCTCTTGCAGATGATCAGAAACACATGGCTTCCTCTCTCTACCAAGCTCTAATTCGTCCACCACCTTTGCTGCTACAACAGAATCTGATGAACGCCAGAGACTTAGACGGCAAAGATTTTGGTATTGGTATTGGTATTGGTAATAATGGTATCTTCCCGAGTTCAACTTTGCCTCTTCCTCATCAAAGCCAAAGCCTACTCTTCCCTTTCTCAACCTCAAGCAGCTCTTTTGACACCAACCCTTGTTCGGTGTCAACTTCTCTGAGATCATCCAATGTTTATAACTATGGGGAGGAGTTCAAAGCAGCGGAAGAATCAACCATCAACAGTACTTCTATAGCGCCTAGCACAGGTGGCACTAACACACAGCCATGGGAGATAGCAGCAACAAGTGGTGTTGGCTTGGGAACTTCAAACTTTTGGAATTGGGAGGACTTTGATTCATTGGTCTCAACTGATCTAAAAGATCCCTGGGATGATTCTGACATCAAACCCTGA


Promoter Sequence:
>Vu_03862::LG1:52291430-52293430(+)
ATATCATTATATATGATAAACAAAGTCAATAACAAACATATTTCCGACAACATCACTAATTACATGAGGAAATTAGCAATAAATTCTTTTATCACTATCTTTTAAGACATTTTGGTCATTTGCATTCTACCATTGGTTAAACAAGTATAGTTTCTAACCTGGTATTAAAAATAATATGGAAAATAATTACTAACGATGTTAAAAAAGGTAAGAAAAAAATATTTTTCATTTGTTTTCTTTCGTTATTTAATGCACCAGGCGTTGAAAAATAAAAATTGAATGAAAGAATTAGAGAGAATTGAAAATTATATATCTTGAATGGAAAGAATATAGTTATACTTTTAAAAAATTGTATTACCAGAATAATGGGAAAAATATCACTGTATATATGAAATATCAGTAATTGAATGGTAACTTGAAACTCACATTTCTTGAAGTTCCTGTCATGCTGTGAAAATCAAATTCGTCTCCGTAACACTTTGCCGATTCTTTGACTAAATTAAACTGCCGACTTGTATTGAATATTGATCCATTGCACCTGAATTTGTGTTCAAACATTCAAAATTGACAACACCTACCTATTAAAAAACTTCATATTCCACAACATTTTACACCATTTATTTAGGCACATGTGTCTGTTACAAACCAGAAACTAACGAGAGTAATAGTATATATTATTCCACACTTCTGCTACTGTATTTAAATAAATTCAGAACTTTACCAACAGTCTGTGCGGTGATAAAGCTTTGTATCCGTTAATTTTAATTATAGAATACAATTTTATCTGAACAACATATAATATATTTATTATTGTTATTGAGAATAAAAGAATGATGGTTGAAGAATCCTCCTTTTGAAGAGTTGGAATTATTTGACCGAGTGGTTGTGAATGTTGTGATTTCTCTGACCATAAACCCTGTTTTCTGTTCTGGTTGCTTCATTTAAATAATTGTTTGAACTTCAATTATCCTATCACTATAACATCCAATCCAAACAACTCCTATGTGTGTGTGTGAGTGTGTGAGGACCACAACCCTTTTGATTTTTGCTCTGAAGCCAACATATTATGGGTGCAGAAACCAACACCCACATATCCATAGACATGAAATGAAAGTGAGCACGTGCATGCAACTCATACATGCTCATCCCCAACCCAACTTCCACTGCTGCATGTTGAAGAGCGTGAGATCTTAGATTGAAGTGAAGATCCTTAAGAAATATGAGATTACTGGAGTAAATGATGTAAGTGTTTGATAGTGTTTGACAACTGTTGTTAACCTTAGAAAGAATCTTTGGACCCATTGGCCCCACGCTCAGCGCCACCCCCTTTCCCCCTAATGAGAATCCATTACAAAAACAAATTTAGCCCATGGACCGTAGTGTACTTGTCTTCTTTTTTCTTTGCCAACTTTGTATTTCCATTGGTGGCCAAGTCTATCTAAATTAAATTATTATACCATCATCATGCACATCTACGTTCGTTTCACAACACAACCAAACCTCTTACACCACTGCCAACGGCCTATAACTCTCCACGTGTCGACCACCCACCTTCACCTTAACCCTTAAGCACTTCTCTCTCTTTCCCATTCTATAATAGTAGCAACTCCGAACAAAGAAAACTCAGCTCGTAGGTTATTACCAAATATTGCATTCAATTTTGTAGGATTGCCTCGTCTACAACTACCCCCACAAACAGTAATCAAACCCTTCACCACACACAACCTTCAAGTAATTTTTAATAACATCATAAATACCCATTAGATATAGACATCTCATAAAAGACATGCTCACTTCTTCTTATCACCTTCATAGGCCTTTCTTCGTTCCAGTAAACACAACTTCCTTATACCTCCACCACACCCTTTTGCCTCGAACCTCCAATCTCATCTTCTTCTTGGCCTTCACATTCATTTCTCTCCTCCCATCTCGATCAAAGGGCTAAAGGTTTCCAATAACTTGGATTCTTCTTTCAAGGTTCGATAGATCTTATTTAGCCA


Gene Sequence:
>Vu_03862(+)
ATGGGTTTGAGTTCTAAGCAGGTTTCTAGCAGTGGACTTGATTGGAAACAAACCTTATTGGAGGCTCAGGACTTGGAACTCCCAAAGCCTAATCTGATGAGGAAACAACAGCAGCAGCAGCAGCAGCAAACTCAGCCTTCAGAGTCTTTGAAGTGCCCGAGATGTGACTCAACCAACACCAAGTTTTGTTACTACAACAATTACAACAAGTCTCAGCCTCGCCATTTCTGCAGGGCTTGCAAGAGGCACTGGACTAAAGGTGGAACTCTACGAAATGTTCCGGTGGGTGGTGGAAGGAAGAACAAGAGGGTCAAAAAACCAAACACTCCAACACCTTCTTCCACCACTGCCACTACCACCCCGACAACAGCCAGCCCTTCTACTTGCACTGCCACCGTCACAACCTCAATTGGCAACATGGATGCTTTGCTGGGTAGTAGCCACATGACAATTCAAACTCCTCTTGCAGATGATCAGAAACACATGGCTTCCTCTCTCTACCAAGCTCTAATTCGTCCACCACCTTTGCTGCTACAACAGAATCTGATGAACGCCAGAGACTTAGACGGCAAAGATTTTGGTATTGGTATTGGTATTGGTAATAATGGTATCTTCCCGAGTTCAACTTTGCCTCTTCCTCATCAAAGCCAAAGCCTACTCTTCCCTTTCTCAACCTCAAGCAGCTCTTTTGACACCAACCCTTGTTCGGTGTCAACTTCTCTGAGATCATCCAATGTTTATAACTATGGGGAGGAGTTCAAAGCAGCGGAAGAATCAACCATCAACAGTACTTCTATAGCGCCTAGCACAGGTGGCACTAACACACAGCCATGGGAGATAGCAGCAACAAGTGGTGTTGGCTTGGGAACTTCAAACTTTTGGAATTGGGAGGACTTTGATTCATTGGTCTCAACTGATCTAAAAGATCCCTGGGATGATTCTGACATCAAACCCTGA