Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03327 LG1 46097561 46098543 PREDICTED: nuclear transcription factor Y subunit B-1-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09151 Immune system   C 04612 Antigen processing and presentation [PATH:ko04612]
SNP Position Effect Amino acid change
G/A 46097565 synonymous_variant p.Asp261Asp
T/A 46097692 missense_variant p.Tyr219Phe
A/T 46097693 missense_variant p.Tyr219Asn
G/A 46098307 synonymous_variant p.Thr79Thr
G/C 46098308 missense_variant p.Thr79Ser
T/A 46098507 missense_variant p.Thr13Ser
T/G 46098516 missense_variant p.Thr10Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_03327.1
MTGKRNQTPTTTTATTISPVGSPTSGNISDSSSKEQDRFLPIANVSRIMKRALPPNAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKLYLNNYRETEGEKSSMAKQEEHSPTHQTNDGLPELNKLPHSSATKPDFNNSFTAGFYSVGPQLTPPKSFTDIGGINGYRETSMNSVIAQSAVSADQDASVLVFILWHESSVEGNIGLRSYLVRLKILMQKDNGLHLLLLRAVEEVT*


CDS Sequence:
>Vu_03327.1
ATGACAGGGAAGAGAAACCAGACACCAACAACAACAACAGCAACAACAATAAGTCCTGTGGGAAGTCCAACTTCTGGTAACATCTCAGACAGCTCCTCAAAAGAACAAGACAGGTTCCTCCCCATAGCCAACGTTAGCCGCATCATGAAAAGGGCACTCCCTCCCAATGCAAAAATCTCAAAGGAAGCCAAAGAAACAGTTCAAGAGTGTGTGTCTGAGTTCATCAGCTTCATCACCGGTGAGGCCTCAGACAAGTGCCAGAGAGAAAAGAGGAAGACCATCAACGGTGATGATCTTCTCTGGGCCATGACAACCCTAGGATTTGAGAACTATGTTGGACCCTTGAAGCTCTACCTCAACAACTACCGGGAAACTGAGGGAGAAAAGAGTTCCATGGCCAAACAAGAAGAACACTCTCCAACTCATCAAACCAATGATGGGCTGCCTGAACTCAACAAGTTGCCTCATTCTTCTGCAACAAAACCAGACTTCAACAACTCTTTCACTGCTGGCTTCTATTCTGTGGGGCCTCAATTAACACCTCCAAAGAGCTTCACAGATATTGGAGGAATCAACGGTTATAGAGAGACCTCCATGAACAGTGTCATTGCTCAAAGTGCGGTCAGTGCTGATCAAGATGCAAGTGTGTTAGTATTTATCTTGTGGCATGAGTCTAGTGTTGAAGGGAATATCGGTCTAAGATCGTATCTCGTACGGTTGAAGATTTTGATGCAAAAAGATAATGGACTTCACCTTCTTCTTCTTCGTGCTGTTGAAGAGGTGACTTAA


Promoter Sequence:
>Vu_03327::LG1:46098543-46100543(-)
TTAAATAAAGTGCTATTGGGTGGATGATGCAGAGCACTATATAGACAACTTTACTTGTTCTTAGTGGGAGAAAAGGATCGAAACACAAGTACAGCTACCATACAAAAGTTTACAGTAAGAAACCAACGTTACATATGTCAAAACCAAAACAATAAGAAACCAGAAATTCATCACGATTGCTGACAGCTAGAACACAATGTAAAAATGAAACTGTTTCAGAAAACTTGCTCCTTGAAAACGTACGCTGCCATACAATTACTGTAACTAAACTGGAATTTAAAACATGAAAAAATGTTTCTATTAATCTACTTCGGTTGCAGAGAGACCAGTTTTATTAAGATGGCTTCATTTGATATTGTTTTTAAGCTGTGTATAATTTAATAATTCAGATCTTGACAAATTTGCTCTTTTTATGTATGTACCATATTTTATGCGTTTGATCACGTATCATCGTACGTTGTTAGTATAATCCAAAGTTTGACTTAAAAACTTCCAACTTTGTCAAACTAAAATAGGCATCATTGCCATAGAATAATTATGCACATAATCATTTTTTCTTTTTTCATCCCAGTTTGAACATAACATAAGTATAGTACAGTGAACATTGTTAGAGTCGTGAAACCTGAGATGATCATAGCATCTATCAAGGACCCAATTGATCTAAACTGTTGAAATCCATGCTGTGATTGAACTGTGTATGTGCACAGCTTGCAGCTAGCTCTTTTAAACAAGAGATTAATATAAAAAAGAATACGTAAGAGCCGGTCCAGTTTATATATATGAATATTTTTAGGGTATGGTTGGTGGATGTAGCTTCCATGTGTCAGAAGGCGGTTCGATTGCTTTATTGTGTGAGGTTGTGGTATTTTTGTTTGCTGAGAATGATGGAGGTGAGACTTGACAGGTTGGAACTGATGAAAGAAGGAAGGTAGTTTAAGACATATTCGTTAAGGGGGAAATAGAAAAGCAAAAGGGTCTCTTTTTGTCAATGCATATTTTTTATTTGCACATTAATTTCATTGTTTGAAGAAATAGGGGACTGTGGGCTGAGATGCCTTGAGATGATACTGCACTGCAATATGAAGTATGTGATGGAAGAATCTCAGTGAGACAAAGCAACACAAAAGCATGGCAAAGTGAAAGCATATATCCCATTGCTTCATCTTTTTGAGCTCCTTTTTCAAAAGCCGTACAAAAATAACATATGCACCAGTACGAATAATTCACGTTATGGGGTCTGATTAAGAATTCCAAACTTATTAAAAGCCAAATGCACTGTCTTCTACCAAACAATTTACCATAATCATTCTCTCATCATTTTACCTTCCTATTACTTCTTCTCCGTCTATCTGGAAAGCACTTTCTCTTTTCCCGTACCTCAACAAACATGGGATATATACGAAACATTTTTCCTTTTCCAAACACCAATGTCACAGCTTTCAACTTAATCCACTGCATTACACTCATGAATAAGTTCCATATTAAACTTTGAACCTTTCTGTCGCTTCTCTTCTGCCCCTCATCAAAACCCTTTTAATCTCTATATAATATTAACCTCTCACATGACCAATTACACAAGATTCCAGAATGATATTTATTTAATCAACATTGCCGACCCTATCTGTTTGATATTTTATGTATAAGAAAACTGGTCTAATTAATCACCCTTGTTATTTGAAACTTGTTCATTTTTTCATTTATTTTATATGATCAAAGGGGTCCTTCTAATTGATATAAAAGACCAACCTTTTGTGATCTTCTTCATCAATTAATCGCCCTTTACTTTCTTCCAATATTCCACATCAAAGCAGCACCTTTCCACTTTTCCATTTTATATCCCCCAACTTTTGTTCCCTTATTAAAGGCCGCATGCAGCACCTAAGCTAAGCATAACTTGTTCACTTACACTTGCACACATAGGGAGAGAAGAGAAGGTGAGAATCTAAATTGTTTAGCTTATTAAGTAGTGACTCTATTCCATTCTCTAGCTCTTCAACAAC


Gene Sequence:
>Vu_03327(-)
ATGACAGGGAAGAGAAACCAGACACCAACAACAACAACAGCAACAACAATAAGTCCTGTGGGAAGTCCAACTTCTGGTAACATCTCAGACAGCTCCTCAAAAGAACAAGACAGGTTCCTCCCCATAGCCAACGTTAGCCGCATCATGAAAAGGGCACTCCCTCCCAATGCAAAAATCTCAAAGGAAGCCAAAGAAACAGTTCAAGAGTGTGTGTCTGAGTTCATCAGCTTCATCACCGGTGAGGCCTCAGACAAGTGCCAGAGAGAAAAGAGGAAGACCATCAACGGTGATGATCTTCTCTGGGCCATGACAACCCTAGGATTTGAGAACTATGTTGGACCCTTGAAGCTCTACCTCAACAACTACCGGGAAACTGAGGGAGAAAAGAGTTCCATGGCCAAACAAGAAGAACACTCTCCAACTCATCAAACCAATGATGGGCTGCCTGAACTCAACAAGTTGCCTCATTCTTCTGCAACAAAACCAGACTTCAACAACTCTTTCACTGCTGGCTTCTATTCTGTGGGGCCTCAATTAACACCTCCAAAGAGCTTCACAGATATTGGAGGAATCAACGGTTATAGAGAGACCTCCATGAACAGTGTCATTGCTCAAAGTGCGGTCAGTGCTGATCAAGATGCAAGTGGTAATAGAATGATGCCATCTGACCTACGTTATAGGGTTGAATGGTAGATGTGACAACCATAGCAGCCTTCCCCCATTACATATCATATCATATATAATATAAATAATATTCTTATTACGATCTATCATATGATATAATTAACAACTTCATCGTTTATTGCTACATTCTGTAACACAGTATATTGTAGTTTGCAGTGTTAGTATTTATCTTGTGGCATGAGTCTAGTGTTGAAGGGAATATCGGTCTAAGATCGTATCTCGTACGGTTGAAGATTTTGATGCAAAAAGATAATGGACTTCACCTTCTTCTTCTTCGTGCTGTTGAAGAGGTGACTTAA