Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03318 LG1 46014031 46014859 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   defense response to fungus, jasmonic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, regulation of transcription, DNA-templated, defense response to fungus, jasmonic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, defense response to bacterium, defense response to fungus, defense response to bacterium, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, defense response to bacterium, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus
Molecular Function   enables   protein binding, protein binding, DNA-binding transcription factor activity, sequence-specific DNA binding, DNA-binding transcription factor activity, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
T/C 46014087 synonymous_variant p.Phe19Phe
G/C,T 46014129 synonymous_variant p.Thr33Thr
A/G 46014291 intron_variant
G/T 46014476 intron_variant
C/A 46014507 intron_variant
C/T 46014594 intron_variant
C/T 46014711 stop_gained p.Gln122*
T/C 46014769 missense_variant p.Met141Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_03318.1
MSPSSPEIALSDFLLLDDFLHHHHGDSLSSQSTESSEKPTCDTTHGFTTGATSKNSNINMQVKCKNANGGSKARLGPRVAFRTKSELEIMDDGYKWRKYGKKSVKSSPNLRNYYKCSSGGCPVKKRVERDREDSSYVITTYEGVHNHESPFTTYYSPISFLHSDHSTSSK*


CDS Sequence:
>Vu_03318.1
ATGTCTCCATCATCCCCTGAGATCGCACTCTCTGATTTCCTCCTTCTCGATGATTTTCTTCATCATCATCACGGAGACTCTCTATCATCTCAAAGCACGGAGTCGTCGGAAAAACCAACCTGTGACACCACTCACGGATTCACCACCGGTGCAACCTCTAAGAACAGCAACATCAACATGCAAGTAAAGTGCAAGAACGCGAATGGTGGAAGCAAAGCAAGGTTGGGTCCGAGAGTGGCATTCAGAACAAAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTATGGTAAGAAGTCCGTGAAGAGCAGTCCAAATTTAAGGAACTATTACAAATGTTCAAGTGGAGGATGCCCAGTGAAGAAAAGGGTGGAAAGGGACAGAGAGGATTCCAGCTATGTGATAACAACGTATGAAGGTGTACACAATCATGAGAGCCCTTTTACCACATACTACAGCCCTATCTCTTTTCTACATTCTGATCATTCTACATCTTCCAAATGA


Promoter Sequence:
>Vu_03318::LG1:46012031-46014031(+)
AAATGTATGTATAAAGCAAATGCAATTGTCTCTACATATCAGATAAGAACTTAGTAAGATGTTCTGATACACAGTTATTATAATACAGGCAATCGTAAAATGCAAATACATCACAAAACAACATTTAATATGCTTTATCTAGTTCATTTTAAATCATTTTAATTAATTACACTCAAATCTAAGTATTAAATGGATACAAGATAAGAGTTATTTTTTATATTTGTATTTAGGCATGTGTCTCAAAGATACAATAACTCTCCATTGGATGCTTACCACTTAATTATTTAATTTATATAAATTAAAGATATATTCTTTTAATGATGAATGTTTGTATTTAATATTACAAATCATATCATTTCATAAAGTTACATTATATATATATATATATATATATATATATATATATATATATATAAAATGTAGCTTAGTTGTTATATGCTATTTGATTTATATTTTCCAAATATTTTCCAAAATCCTCAACATAAGCTTCATATATTATAAATAAAAAATTATGATTTTTAATTAAGAACTCTAGTTTTGAACCGAAACTGCATTTCCTCATCATTATTGTAATGAAAATATTGAAAAAAAAATGGTAGATAACATTTGAATATTGTCTATCTGTTGGAAGTCCCATCGACTAGAGATAAGACCAAAATATAATATATAAGTGAGGTGTAAATCTCACTTACAAGCCGGTTTTATGAGATTGAGTTAGGCTTAAATCCACTTTTTAATACTATCTTATCGAAATAATTTGGATTGTGGGAGATTATATTTTTACATTGAGAAATAACAGTACCTAGATCTAAAGAATCAGGTTATGCTAATATAAGCACCAAAACAATATTTTAAAACAAAAATTAGAAAAAACAAAATGCATTAATTCATGGTTTAATTAACTTTTAAAAATCTTACAAGGTATTCTCAATTGAATTTTTAATAATTTTTGTTTTGTTTTATTAAATGCTCAAAATATTTTTTGTCTTCACTAATGCTCTATCATTTGAATTTTATTGTCCACGAGACGAGACGATGTGGTTGTTACTTTATTTATTTATTTATTTTTATTTCTAATTCATCAATCAATTAATATTTGTTATTTTTAGTTTCTTCTAACTCGTTTTTGGAAACTGAAATGAAGGAGTTTGAAAAGACTAAGAAACGAGAAAATGAATTATTAAGTTAGAAACGAAAAGAGAAAAATAATAATTTCATGATTTATTTGAAAAAATAACAAAATACTCTATAAAATTAAATATTTAAATTTATAAAGTAGTGAAAATTTAATTAAGTCTTTAATTGATTGTATTGAAAGCATTTAAACCTAAAAGCATCCGATATCATGAACTAAGCATAATTTGGTTGATACAAATGTAGTTTCTTTTCTGTTAATTAATCTAAGATCATCAGTTTTGTTGTTTTCAGTGAAAGGATCTTTCTCCAGCCGCCACAAGCCCACAACTTTCTATACATGCTGTCGTGGTTAATTAACCTAACCAGCCAATTACGTTGGATTTAATGATGAGACAATGAAACCTCACGACCAAAGTGAAAATTAATTAATTAATTAATCAATAATTAGGGTAAAATCCATTTATATTATAATTATTATTATTATTTGGATGAATTAAAGAGATAAGAGCTGAATACTAAATAAAAGAATTAAACAACATAGTGGCCTTTAGACAGTGACGTCATGGAATGACATGAGATTGGTGTACATGGATGATAGAGGAAGCTTCATTGCATCATCTAGGAAAGAGTACAGAAAGGTGGTTCCTGGAAAACCATAACATGGAAATGGAAAACTATGATTATCATCCTTCTAGATATCATTTTTTAATCATATAAAAACCATTCTCTACTTTAACTCTCACTCTTATAAAATGCTCATTCCCTGCATTCAACTACTACTACTACTACTACACATTCATCTATAGCAATGGATTTCTTCTACTTTGGAAACCCAAACCCTTCTCATACTCATCTCCATAACA


Gene Sequence:
>Vu_03318(+)
ATGTCTCCATCATCCCCTGAGATCGCACTCTCTGATTTCCTCCTTCTCGATGATTTTCTTCATCATCATCACGGAGACTCTCTATCATCTCAAAGCACGGAGTCGTCGGAAAAACCAACCTGTGACACCACTCACGGATTCACCACCGGTGCAACCTCTAAGAACAGCAACATCAACATGCAAGTGTCTTTTTCTCTCTCTTTCCTTCTCATACTTTCAAGTAAACAGAAATTATACTTTTTACATAACATGACAGTTTTAGTGGTGAATGATTTTATGCAGAAAGTGCAAGAACGCGAATGGTGGAAGCAAAGCAAGGTTGGGTCCGAGAGTGGCATTCAGAACAAAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTATGGTAAGAAGTCCGTGAAGAGCAGTCCAAATTTAAGGTAAAAACCTACGAAGGTGTTGATTAACAGAGACAAAAAACCTAGTACAAGATAACAAAATTAAGATAAAATGAACATTAATTTGACCTAGGCTATGAAACAGTATAGTGCCTGATAACGAAGCTAAAGAATTGCACATGGTAGAGCTAAAAATATTATACTAAGACTTGACATTGTGAGGTTTTTGTGCTAAGTGGGTGATTTGATTAATGATGGTAGGAACTATTACAAATGTTCAAGTGGAGGATGCCCAGTGAAGAAAAGGGTGGAAAGGGACAGAGAGGATTCCAGCTATGTGATAACAACGTATGAAGGTGTACACAATCATGAGAGCCCTTTTACCACATACTACAGCCCTATCTCTTTTCTACATTCTGATCATTCTACATCTTCCAAATGA