Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03157 LG1 44380890 44381369 PREDICTED: ethylene-responsive transcription factor ERF114-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, defense response to fungus, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, defense response to fungus, regulation of transcription, DNA-templated, defense response to fungus
Cellular Component   located in   nucleus
Molecular Function   enables   transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
A/G 44380961 synonymous_variant p.Gln24Gln
G/A 44381001 missense_variant p.Ala38Thr
C/T 44381002 missense_variant p.Ala38Val
G/C 44381064 missense_variant p.Ala59Pro
C/T 44381068 missense_variant p.Ala60Val
A/G 44381083 missense_variant p.Asp65Gly
G/C 44381088 missense_variant p.Ala67Pro
G/A 44381091 missense_variant p.Ala68Thr
T/C 44381129 synonymous_variant p.Phe80Phe
A/C 44381169 missense_variant p.Thr94Pro
G/A 44381176 missense_variant p.Arg96His
G/A 44381186 synonymous_variant p.Ser99Ser
G/T 44381193 missense_variant p.Ala102Ser
C/T 44381214 synonymous_variant p.Leu109Leu
C/T 44381240 synonymous_variant p.Asp117Asp
C/A 44381248 missense_variant p.Ala120Asp

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_03157.1
MLARCLLKFVTCDVAMCEGSARKQYRGVRQRPWGKWAAEIRDPKKAARVWLGTFPTAEAAALAYDEAALRFKGSKAKLNFPEKVHLSGELGYLTNRPPSLQASSTPFQLLPRHTPTDNDAILSSSSSPSSSTFSMNSAASSSEPPTKRKPDFDAKQKLH*


CDS Sequence:
>Vu_03157.1
ATGCTCGCAAGGTGTTTGCTGAAATTCGTGACGTGTGATGTGGCTATGTGTGAAGGAAGCGCAAGAAAACAATACAGAGGAGTGAGACAGCGACCATGGGGGAAGTGGGCCGCGGAGATTCGCGACCCGAAGAAAGCAGCCAGAGTTTGGCTGGGAACTTTTCCCACCGCGGAGGCTGCTGCACTTGCTTACGATGAAGCAGCTCTCAGATTCAAAGGAAGCAAAGCCAAGCTCAATTTTCCAGAAAAAGTTCATCTCTCAGGGGAATTAGGTTACCTCACAAATCGTCCACCATCGTTACAAGCCTCTTCAACTCCCTTCCAACTGCTTCCTCGTCACACTCCAACTGACAATGATGCCATTCTTTCTTCCTCTTCTTCGCCATCGTCTTCAACCTTTTCGATGAACTCCGCAGCTTCTTCTTCCGAGCCTCCTACCAAACGGAAACCTGATTTCGATGCCAAACAAAAACTACATTAA


Promoter Sequence:
>Vu_03157::LG1:44378890-44380890(+)
AGCTATGTTCTAGTTAATTAGAACATTGAAGTTGTCGTTGTGCGTAGCTATTATCAATGTGGGTGATTTATATTTTTCTGAAGGTGTGTTACGAGTTAAAAGGTTGTTTCGTGTTCTTGTGATTACAAAAATAATTTATTTTGTCCAGTCCTTTTCGTGTTTGTGTTGTCTTATATTTAGTTTTAAAATCAAATATAAAACTAGTTTTTTGTTTTTGTTATAATTTTAAAATGCCAGCTTCAATACAGCTTAATTATAGAATGTGAATGTAAGTTGTATAATGAAAATAAAGATCTAAGACCAAAAGTAATAGTTTACGGACAGGCTGTGAGTCCTTTTTCTCACTACTATTTCTATTGCAACCTAAAATGTCTTGCACTCCTATGTTGCCAACAAAAGAGAGATATAAAACCATTTAAATTTCTCTCTTTTTTTTTACCATAAAATGATAGTTTAAAAAAATTTTACTTAGATAAATAAATAACCTTAATATGGCCACAAGACAAGCCAAAGGTCAACATAAAAAATTTAGACATAAAATTAGAATTCATTTAGACATAAAATTAGATATGATTTTAAATATGGTTTTAATCTTTGCATTTAGACATAAAATTAGAATTCATTTTTTTTTAACTTTTGATAATTTTTTGTCCTTAAACCTTATAACTTAATTAATATAGTTATTTTAACTTAGTGATATTAAGTTTTTTTTTGCATGTTAAACAATATTTTAAACTAATATTTGAATTAAAAAAAGTCCAATGTAAATAGCTCAAGCGTAAATCTAAAGTATCGTTTAACACCAAAAAAAACTTAATGCAATTGAATTTTGCATCAAAATTTAAGATATAACTGAATTTCAATTTTATATCAAAACATATCAAAACTCTCTCATTTTTAAATCATAATCACCAAATAAAGAAAAGGAAGAGAGAAAACCATTATTTGTAAATGTGTAAAAAAAAAAATAATTAATGTTCACAAAAAAATGACCAGATTTTTTGTTTGCTCAAAGATAAAGAAAATAAAATTTGTTTTAGTAAGATAAATTTTTCATTAATAACATAGTGAAGAAGTTGTGTCCAGATTTAAACTCATTTACATGTATATTACACACATCTTTCACATAAAATATTGATAAAAAAAAATTGAAAGATCTTGTGCCCTATTATATAGTACGTTGTGTGTGAGCTGAAATTATACACAACTTTGTTTGCCCCAGATAAAAAAGATGCCACTTTATTACATTGTACCCACTTTCTTTTAAAAAGGAAAGTATATCTATATATCCATACATAAAAAGAGATACAGAGAGAGAGAGAGAAAGAGAAAGAGAAAGGCTTGATATTTTTTTAAAACATTGTACATATGATAGGTTTTACTTTTAATCCTTCAATTATTTTTTTGATTCTTATAAATCTTAGTACTATGTAAATTTAATAATTCATATTACATAATTCTAGACAATCCAGACAAAGTCATGTTATATGCCATCCCATAATAGTTGTTAGTATGTGACGTGTCTATACACATATTACATAATTCTAGATAATGTCTTAAATTATTTCGAACACCAAAACTATTAATTTTTATTTTGAAAAATAAAACTAATAAAGTTTTAATACATATAAGTATGTATTTATTGAAAGAGTCGTAGTTTATTCCACTATAAAGTACAAATTTTAGAATCTAAATTATAAAATAAAAAATATATCTTTCTGCTAATTATCAAATAAATCTCAATTAAAAAATAGGTTTTATAAGAGACAGTGAAAGTGTAAAAGATAAATTAAAACATTATAAGATAAATTAAGATATTATAAAATAGGCTTTGAGAAAGAATTCTACCCAATGTTTAAATTTAATGGCACCATACTATCTCTAAAACAAAAATGTTTGGAGTAAATGAAAAACCACTTACGACTTTCCAAGTGTTTATAATGTCAAGTTATTAAAAGTAACATATAGTTGAATGTGACTTGCGTGTGCACAACGAAAGA


Gene Sequence:
>Vu_03157(+)
ATGCTCGCAAGGTGTTTGCTGAAATTCGTGACGTGTGATGTGGCTATGTGTGAAGGAAGCGCAAGAAAACAATACAGAGGAGTGAGACAGCGACCATGGGGGAAGTGGGCCGCGGAGATTCGCGACCCGAAGAAAGCAGCCAGAGTTTGGCTGGGAACTTTTCCCACCGCGGAGGCTGCTGCACTTGCTTACGATGAAGCAGCTCTCAGATTCAAAGGAAGCAAAGCCAAGCTCAATTTTCCAGAAAAAGTTCATCTCTCAGGGGAATTAGGTTACCTCACAAATCGTCCACCATCGTTACAAGCCTCTTCAACTCCCTTCCAACTGCTTCCTCGTCACACTCCAACTGACAATGATGCCATTCTTTCTTCCTCTTCTTCGCCATCGTCTTCAACCTTTTCGATGAACTCCGCAGCTTCTTCTTCCGAGCCTCCTACCAAACGGAAACCTGATTTCGATGCCAAACAAAAACTACATTAA