Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03093 LG1 43621186 43625404 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   unidimensional cell growth, regulation of cellular component organization, developmental growth, embryo development ending in seed dormancy, protein phosphorylation, seed development, protein phosphorylation, embryo development ending in seed dormancy, meristem development, embryo development ending in seed dormancy, seed development, phyllome development, shoot system morphogenesis, embryo development ending in seed dormancy, phyllome development, regulation of cellular component organization, cellular component biogenesis, cell differentiation, embryo development ending in seed dormancy, plant-type cell wall organization or biogenesis, seed development, unidimensional cell growth, protein phosphorylation, unidimensional cell growth, cell wall biogenesis, shoot system morphogenesis, cellular protein modification process, seed development
Molecular Function   enables   protein binding, protein binding, protein binding, protein binding, protein binding, protein kinase activity, protein kinase activity, protein serine/threonine kinase activity, protein binding, protein binding, protein binding, protein kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, ATP binding, protein binding, protein binding, protein binding, ATP binding
SNP Position Effect Amino acid change
G/A 43621282 3_prime_UTR_variant
A/T 43621307 3_prime_UTR_variant
T/C 43621322 3_prime_UTR_variant
T/C 43621455 synonymous_variant p.Ser651Ser
G/T 43621456 stop_gained p.Ser651*
T/C 43621496 missense_variant p.Ser638Gly
G/A 43621506 synonymous_variant p.Ile634Ile
C/T 43621675 downstream_gene_variant
C/T 43622174 synonymous_variant p.Arg467Arg
T/C 43622255 downstream_gene_variant
T/C 43622304 synonymous_variant p.Thr449Thr
T/A 43622313 synonymous_variant p.Ser446Ser
T/A 43622379 synonymous_variant p.Gly424Gly
T/C 43622499 downstream_gene_variant
T/A 43622746 downstream_gene_variant
A/G 43622970 synonymous_variant p.Pro289Pro
G/A 43623042 synonymous_variant p.Ser265Ser
A/G 43623189 downstream_gene_variant
C/T 43623307 downstream_gene_variant
T/G 43623343 downstream_gene_variant
C/T 43623530 downstream_gene_variant
G/C 43623552 downstream_gene_variant
G/T 43623557 downstream_gene_variant
A/C 43623970 downstream_gene_variant
G/T 43624042 downstream_gene_variant
A/T 43624053 downstream_gene_variant
G/A 43624162 downstream_gene_variant
T/C 43624177 downstream_gene_variant
T/C 43624182 downstream_gene_variant
T/C 43624214 downstream_gene_variant
T/A 43624249 downstream_gene_variant
C/T 43624307 downstream_gene_variant
G/A 43624373 synonymous_variant p.Pro58Pro
A/T 43624470 downstream_gene_variant
A/C 43624499 downstream_gene_variant
A/G 43624547 downstream_gene_variant
A/G 43624585 downstream_gene_variant
A/G 43624593 downstream_gene_variant
G/T 43624654 downstream_gene_variant
T/G 43624753 synonymous_variant p.Ser14Ser
A/T 43624762 synonymous_variant p.Gly11Gly
A/G 43624769 missense_variant p.Leu9Ser
A/C 43624817 5_prime_UTR_variant
C/A 43624849 5_prime_UTR_variant
G/A 43624969 5_prime_UTR_variant
T/A 43624971 5_prime_UTR_variant
A/G 43624997 5_prime_UTR_variant
A/C 43625013 5_prime_UTR_variant
A/T 43625059 5_prime_UTR_variant
G/A 43625079 5_prime_UTR_variant
G/C 43625096 5_prime_UTR_premature_start_codon_gain_variant
T/A 43625140 5_prime_UTR_variant
C/T 43625144 5_prime_UTR_variant
T/A 43625200 5_prime_UTR_variant
G/C 43625320 5_prime_UTR_variant
T/C 43625397 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_03093.1
MKLCTLLLLIGLVSVLSFVASVGLPSNNEVSALRRFKEAVYEDPHKALSNWNTLESDPCDWNGVSCTATRDHVIKLNISGASLKGFLAPEFGKITYIQELILHGNNLIGIIPKELGMLKSLKVLDLGMNQLSGPIPPEIGNSTQLMKINLQSNGLTGRLPPELGNLKYLQELRLDRNKLQGSLPGGSSSNFSSNMHGKYASGVNLTAFCRSSQLKVADFSYNFFVGSIPKCLKYLPRSSFQGNCFHIKDIKQRTLVQCGASPAQSGPVVNPKSESATKHVTKHQETSKPAWLLALEIVTGTMVGSLFVIGILTAIQRCNNKSSIIIPWKKSGSGKDYLAIHIDSEMLKDVTRYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEENWTGYLELYFQREVADLARLDHDNAGKLLGYCRESIPFTRMLVFEYASNGTLYDHLHCYGEGCQLSWTRRMKIIIGIARGLKYLHNEIEPAFTISELNSNAVYLTEDFSPKLVDFESWKTVLERSEKNSGSVSSQGAVCVLPNSLEARHVDPKGNIYAFGVLLLEIISGRPPYCKDKGYLVDWARDYLEMPEVMSYVVAPELKHFRYEDLKAICEVITLCISPDPSVRPSMRELCIMLESRIDTSINVELKASSLAWAELALSS*


CDS Sequence:
>Vu_03093.1
ATGAAGTTGTGTACTTTATTGTTGTTGATTGGTTTGGTTTCAGTGCTCTCTTTTGTGGCTTCTGTCGGGTTGCCTTCAAATAATGAAGTTTCGGCACTTAGAAGATTCAAAGAAGCTGTTTATGAAGATCCACATAAGGCTTTGTCCAACTGGAATACTCTGGAGTCAGATCCCTGTGACTGGAATGGTGTTTCTTGCACTGCAACGCGAGATCATGTCATCAAGCTTAATATATCAGGGGCTTCGTTGAAGGGCTTTCTTGCTCCAGAATTTGGGAAAATCACATACATACAAGAACTGATCTTACATGGCAACAATCTCATTGGAATAATACCTAAAGAATTGGGCATGCTGAAATCTCTTAAGGTGTTGGATTTGGGAATGAATCAGTTGTCTGGACCAATTCCTCCGGAGATTGGAAATTCGACCCAACTTATGAAAATAAACCTGCAGTCCAACGGTTTGACTGGTAGGCTACCTCCGGAGCTAGGAAATTTGAAATACCTTCAAGAACTTCGACTGGACAGGAATAAGCTTCAAGGATCTCTTCCTGGTGGTAGCAGTTCAAATTTTTCTTCAAATATGCATGGGAAGTATGCCTCAGGTGTGAATTTAACTGCCTTCTGTCGTTCATCTCAGTTAAAAGTAGCAGATTTTTCATATAACTTTTTCGTTGGCAGCATACCCAAATGCTTGAAGTATCTTCCGAGATCAAGCTTTCAAGGAAATTGTTTCCATATCAAAGACATAAAACAGAGGACTTTGGTGCAATGCGGTGCTTCACCTGCCCAAAGCGGTCCAGTAGTGAACCCAAAGTCCGAATCTGCTACCAAACATGTAACCAAGCATCAAGAAACATCGAAACCTGCTTGGCTTTTGGCTCTAGAAATAGTGACGGGAACTATGGTTGGTTCTCTCTTTGTTATTGGTATTCTCACTGCAATTCAAAGGTGTAACAACAAATCATCTATCATCATACCTTGGAAAAAATCTGGAAGCGGAAAAGATTATCTGGCAATACATATAGACTCGGAGATGTTGAAGGATGTGACGAGGTATAGCAGACAGGATCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGATAGCGTGGTGTACAAGGGTACGATGAAAGGTGGACCCGAGATTGCTGTAATCTCCCTCTGCATCAAGGAAGAAAATTGGACGGGATACCTTGAGCTCTATTTTCAAAGAGAGGTGGCAGACTTGGCAAGGTTAGATCATGATAACGCAGGAAAACTGCTAGGATATTGCAGAGAGAGCATTCCATTTACAAGGATGCTGGTTTTTGAATATGCATCAAACGGAACACTTTATGATCACCTACATTGTTATGGAGAAGGGTGCCAGTTGTCATGGACACGGCGTATGAAAATTATCATTGGCATTGCACGTGGACTCAAGTATTTGCACAATGAAATTGAGCCAGCATTCACCATCTCAGAGTTGAATTCCAATGCTGTTTACCTTACAGAAGATTTTTCCCCTAAGCTGGTGGATTTTGAGAGTTGGAAGACAGTTCTTGAAAGATCAGAAAAAAATTCTGGTTCAGTTAGCAGCCAAGGAGCTGTTTGTGTTCTACCAAACTCCCTTGAAGCACGCCATGTTGACCCCAAAGGAAACATATATGCTTTTGGTGTACTTCTACTGGAGATAATCAGTGGAAGACCTCCATACTGCAAGGACAAAGGGTACTTGGTGGATTGGGCCAGGGACTATCTTGAAATGCCAGAAGTAATGTCATATGTGGTGGCTCCTGAGTTGAAGCATTTTAGATATGAAGACCTGAAAGCAATATGTGAGGTGATAACTCTTTGCATCAGTCCTGATCCCTCTGTACGTCCATCAATGCGTGAATTATGCATCATGTTGGAGAGCAGAATAGACACATCGATAAATGTGGAGCTAAAGGCATCATCTCTGGCTTGGGCTGAGCTAGCCCTTTCATCATAA


Promoter Sequence:
>Vu_03093::LG1:43625404-43627404(-)
TAAACCAGAAAACCTTCTCACATTATAAAAAAAAATAATGATACTTTGACAATATTATTTTGACAACATTTTAATATTATTTACGTGTCAAATTATATGATTAGTCTAAAATTACTTTACAATCAATAATAATAATCATAAACATCCAACATTGACCAATCACAGAATGACACGTAAATGATGTTAAAATGTTGTAAGAAAAATATTGTGAAAATATTATTATTCTTATCTAAAACATTATTATTAATTAGGAAACTACATGTCCAGCATCAAATGCATTTTAAGAAACTTTAACTGCGTTTTGAAGGAGTCCTATTGTGCAATGTTATTAATTAGGTTCCTTTCTTTAAATATACTCAACCTCTTTAAAGAGGATCTTGCTTGGAAGCACTGTTCATTTCAACTTAAACAATATCTTCATTTGTCTTTTTCTTACCACCATTAATACAAAATGTCAAAATCAAATCAAGTGCTCTTCTTATTTAGTAACCTTCCCCTTTATCTATCAACATTACTTTTCTATCTATATATCTACCTAAGTTCTTCAAATACAAAACACCAACCACTTCTTCTTTTTTCAACCCTACTTTTTAATTTACTACATTTTAACTAACAACTTTCAAAATAAAAATAACATACTCAAATTAAAAAACTATATTCTTCTTAATTTTCAATAATGTTAATTTCGTTAACTTTGTATTATTCTATGAAATATTTAGTAACATGGTTGATGGTTGATAAATTTATGTTAGAAAATTTAATTATGAATTTTTAGTTTATTGGTTTATTATTGATAAAAAAGAAAATAGAAAGAAAAAAAATAGGGTAGGAGGGGAATTGTTATATAAATGACTAAAAAATATAGTTTGACGCGTGACATTAGCTTTAATAATGGATTTAGATGGAGAACAACTGTGAACGTGGAATTTTGGAAGCATTTCGTTGCTTTTTCAAAAAGCACTTTTGCTTATCATATATATCACCTAACTAAACATCAACCATACAATTTAAATCATTGATTTGCTTATTAGTGATATTCTTAATAAAAAATATTTATTAAAATTGACTTTCCGCAATCGTTGTTCATTCGTGACATTGACTCTTAATGCAAAAAATAATTTTGTTGTTTAAGAAATTGATATCACATGATATGTACTTTTAGTATATTATTTTGGTAATTGAATGTGGGGGAAATTACAAGTGATTTAGTTTGAAATTTATCATTTTCTTCACCCATTTTTAAACAAATTTCTCCTTTAATGCCCATGAGAAAAAAAATATAAAATTTTTTTTTTTAATAAATTAAAAATTATGTTATGCATTAAAATGTTCATACAATTTTTAATTTTTAACTTATTTAAAACTAATTTTAGTCCATAAAAATGTTTTATTTTTTCTTTTAATGCCAGGAATGCAAATTTGTTTAAATGTATACAAACATGAGAGTAATTATTAAAAAATAAAACATCTTTATTGTTTCTGTTTTATTTTTCATAAAACAACACATATACTCTACTCATTAATAATACCTATTTTTATTAACTAGAGAATGTGAGATTTAAAAACGGGGGTATGGGAAGTAAATTTATGTTGTGCGAAAAGTCAATTCATGTCCTTTTTTGTCTTTATTTATTTATTCGTTACAATAAATCATGATATCTATTCTCATCACTCCAGAACTCGACCACAAAACAACAAACTAACGCCATTTTATTTTTACTTCAAATACATATTTGAATATTGTATTATCTTTTTTATTTTTAAAGAAGTACAACATGAATTAATTAATGGGTTGTTTTACTTGAAGATTCCTAATTATTTAACTTTCTATTTATATGCAGAATTATCATTTTTTTTTACTTTTATCTTTTGAAAAATGTTTCTTTTAAGAAACATCCTGGTATATTTTTGAACTGCGTGTGAAACTTATTTGAATTGGCAAATGAGATTGAAAGAAAAGAGAGCGATAAATTGAAGTGATAATGATGGTTTAATGGAAG


Gene Sequence:
>Vu_03093(-)
GAGGAGAATACCAAGTTCTCGTGTGACGACATAGAAGACCTACATAGCAATCAGCACCTCCCTATGGGAAACACTAATCACTGCCAATAGCATTTTGAAAGAGAGAAATGCACAGTCCAAGTCCCAAGAACACAATGCACAAAAACAAAATAGTTTTTACCTTAAAGATATCCACAAACCGCCATTTTTAACATAATTCAAAATAAAAAGGTCCTTCTTTTTTTCATAGGCCTCACTCAGTGCCATCAAAATCCAAGCTTGGATAAACTCTCTTTGAATCCAAGTTTCATCCTCTTCTGGGTTGTCTTCAGACTTTAGTATAGTCCAGTGTCAGTGTCACCCTCTTCCTCACACCTCTCAAATCCACCATTTAAAACTCTATCAGTAGTGTTCATTTTCTGAACCTCTCAACTTGGCCAAGTTTGTATCTTTTATCTTTTGGGTATAAATCCCTGCAAGTTCTGGGAAATTCAGTTTCATACCATCATTCTTTTTTGCTGAGTTGCACTTTTGTTGGGAAGACCACCTTGGCAGTGACTAACGAACGAGGAAGAAGAAGAAAAGAAGAAGAAGCAGAAGCAAGATAGTGTAGAAAATTTGGGAGAAGAACATGAAGTTGTGTACTTTATTGTTGTTGATTGGTTTGGTTTCAGTGCTCTCTTTTGTGGCTTCTGTCGGGTTGCCTTCAAATAATGAAGGTAAGAGTTAAGGCTGAGAACTCACTTTCTCTCTCAGATCTCGAGCTTTTACCTGTGTTGACTTCTGTTTGGATCACGTAGCAAAATTTACCATTTCTTGTTCTTGTGTGAACTTGGAAATTTTAAGATCGATTAATTGGTTTGCATTCTTGTCTTGGCTAACTACCGTATACATTCACAATAATGAAGCATTTACTCTGTTTCTTTTAATATATTTTTGAGTTGTAGAATTTGGTTTTTGTTCTCAGTTTCGGCACTTAGAAGATTCAAAGAAGCTGTTTATGAAGATCCACATAAGGCTTTGTCCAACTGGAATACTCTGGAGTCAGATCCCTGTGACTGGAATGGTGTTTCTTGCACTGCAACGCGAGATCATGTCATCAAGCTGTAAGATACCATGGATCCGTTATAACATGTAGTACATTTCTTTTGCTTATTAGTCCTCTCTTGCAATGGGACGAGCTTCATCAACCATGACTGAGATGTTAAATTAATGGCATACTTTCCCGAGCTAGCACATTCCTAATACAACAGAGTGGATTCCCTTTTTTGCAGTAATATATCAGGGGCTTCGTTGAAGGGCTTTCTTGCTCCAGAATTTGGGAAAATCACATACATACAAGAACTGTATGTATCTTGTTTCTGCAATCCTTTCATCATTCTCCAAACCTTAGTTAGTGATTGGGTGTTATTACCTTGACTTATAGCACTTCAATATCATGTTTGTGACTAATTTTTGGTTCTCATCGCTGCAGGATCTTACATGGCAACAATCTCATTGGAATAATACCTAAAGAATTGGGCATGCTGAAATCTCTTAAGGTGTTGGATTTGGGAATGAATCAGTTGTCTGGACCAATTCCTCCGGAGATTGGAAATTCGACCCAACTTATGAAAATGTAAAAGGACTTTATTCCAAAATTGGACTCTCAAATTATTTTGTGGACTTGTGTTTTGAATAACATGTATTCTTGCAGAAACCTGCAGTCCAACGGTTTGACTGGTAGGCTACCTCCGGAGCTAGGAAATTTGAAATACCTTCAAGAACTTCGACTGGACAGGAATAAGCTTCAAGGATCTCTTCCTGGTGGTAGCAGTTCAAATTTTTCTTCAAATATGCATGGGAAGTGAGTAAATATTTTTGAAAAACCAGTCTAGTTTGTTTAGGGATACGTTGCACCATTAAAATTTGGATCTCAAACTGACTCGTTATTCCTATTCAGGTATGCCTCAGGTGTGAATTTAACTGCCTTCTGTCGTTCATCTCAGTTAAAAGTAGCAGATTTTTCATATAACTTTTTCGTTGGCAGCATACCCAAATGCTTGAAGTATCTTCCGAGGTATACTTTTGATCTTCTCGTTAAGTTGGCATTTTAGTCAAACCTCCTTTCTCAGAAAAGGTAAAATCCATCATGCAGATCAAGCTTTCAAGGAAATTGTTTCCATATCAAAGACATAAAACAGAGGACTTTGGTGCAATGCGGTATGTATGACATAATATTTTTTGCATCTAAACATGAACCCATGTTTTGAGAATGGAATAATGGATAACTCAAACTTTTGTGAATCACGTATGCATTTGATCCCTTTTGCTACGATATACACATTACCTATAATAGCTGTTCCTTGTTTGTTTTACATCTAGGTGCTTCACCTGCCCAAAGCGGTCCAGTAGTGAACCCAAAGTCCGAATCTGCTACCAAACATGTAACCAAGCATCAAGAAACATCGAAACCTGCTTGGCTTTTGGCTCTAGAAATAGTGACGGGAACTATGGTTGGTTCTCTCTTTGTTATTGGTATTCTCACTGCAATTCAAAGGTGTAACAACAAATCATCTATCATCATACCTTGGAAAAAATCTGGAAGCGGAAAAGATTATCTGGCAATACATATAGGTTTGGTTTCTTTGCTTCCTGTTATGTGATTACTACTGATATTTTGTATAGATGTTTTGAACAATTAACTCTATCAATGAGCAGACTCGGAGATGTTGAAGGATGTGACGAGGTATAGCAGACAGGATCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGATAGCGTGGTGTACAAGGGTACGATGAAAGGTGGACCCGAGATTGCTGTAATCTCCCTCTGCATCAAGGAAGAAAATTGGACGGGATACCTTGAGCTCTATTTTCAAAGAGAGGTAAATGAAATGGAACACTCATGTCATGCTTACAGTGTGCAAGAATTGAGAGAAAAATGATGAAACTACTCATTAAATTTTTCTGCTATCGATGCATTTCAGGTGGCAGACTTGGCAAGGTTAGATCATGATAACGCAGGAAAACTGCTAGGATATTGCAGAGAGAGCATTCCATTTACAAGGATGCTGGTTTTTGAATATGCATCAAACGGAACACTTTATGATCACCTACATTGTTGTAAGTCACAGTTCTTGCTCGTGTGCATGTCTTTTTGTTTCAGTTCCTTAAAACATGAATGAAATCATAATTGCAGATGGAGAAGGGTGCCAGTTGTCATGGACACGGCGTATGAAAATTATCATTGGCATTGCACGTGGACTCAAGTATTTGCACAATGAAATTGAGCCAGCATTCACCATCTCAGAGTTGAATTCCAATGCTGTTTACCTTACAGAAGATTTTTCCCCTAAGGTGTGTGTGCATGCATCTAGTTTAAGTTATAATTATGATTTTGCTGAATATCTTACTCAATGAACCTTAAATTTCAGCTGGTGGATTTTGAGAGTTGGAAGACAGTTCTTGAAAGATCAGAAAAAAATTCTGGTTCAGTTAGCAGCCAAGGAGCTGTTTGTGTTCTACCAAACTCCCTTGAAGCACGCCATGTTGACCCCAAAGGAAACATATATGCTTTTGGTGTACTTCTACTGGAGATAATCAGTGGAAGACCTCCATACTGCAAGGACAAAGGGTACTTGGTGGATTGGGTAAGAAACTTCCCAAAAAATTGGATTGATTTTTCTATGGAATCATCACGTAAAGCATCAAATGTTGAATGTTAAACTCGTGTGTTGCAGGCCAGGGACTATCTTGAAATGCCAGAAGTAATGTCATATGTGGTGGCTCCTGAGTTGAAGCATTTTAGATATGAAGACCTGAAAGCAATATGTGAGGTGATAACTCTTTGCATCAGTCCTGATCCCTCTGTACGTCCATCAATGCGTGAATTATGCATCATGTTGGAGAGCAGAATAGACACATCGATAAATGTGGAGCTAAAGGCATCATCTCTGGCTTGGGCTGAGCTAGCCCTTTCATCATAATTCACTCAATAATACTCAACTAACCACACACTACACACTGCTACTGAAGCAGACCTATAACCATAATGCATTTCTAACTTTAAATTTTCCTTTTTTATCTATTTAGTTTTGTTTCTCACCTGTAAATGATTGTTCACAAAAAAGGGAATGTGCATCGTGAGGTAACCTTGTATAGCGGTGGTTGACACATGGAAATTGATAAATCAATGGAATTGGACAACTGTCTTTACTTC