Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02912 LG1 41941017 41944878 PREDICTED: U-box domain-containing protein 35-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/C 41941068 synonymous_variant p.Gly761Gly
C/T 41941070 missense_variant p.Gly761Ser
C/G 41941135 downstream_gene_variant
T/C 41941142 downstream_gene_variant
G/A 41941253 synonymous_variant p.Asn725Asn
G/A 41941559 synonymous_variant p.Asp623Asp
A/G 41941613 synonymous_variant p.Asp605Asp
G/A 41941748 synonymous_variant p.Leu560Leu
T/C 41941826 synonymous_variant p.Leu534Leu
G/A 41942045 downstream_gene_variant
C/A 41942066 downstream_gene_variant
G/A 41942069 downstream_gene_variant
G/A 41942158 synonymous_variant p.Cys469Cys
T/C 41942163 missense_variant p.Arg468Gly
T/A 41942165 missense_variant p.Tyr467Phe
T/C 41942376 missense_variant p.Thr397Ala
G/A 41942380 synonymous_variant p.Cys395Cys
T/A 41942459 missense_variant p.Glu369Val
T/C 41942505 downstream_gene_variant
G/C 41942552 downstream_gene_variant
C/A 41942561 downstream_gene_variant
G/A 41942676 synonymous_variant p.Leu338Leu
A/T 41942789 downstream_gene_variant
C/A 41942989 missense_variant p.Cys270Phe
T/A 41943050 missense_variant p.Thr250Ser
T/C 41943227 downstream_gene_variant
A/T 41943261 downstream_gene_variant
A/T 41943265 downstream_gene_variant
T/C 41943268 downstream_gene_variant
A/C 41943292 downstream_gene_variant
T/A 41943294 downstream_gene_variant
G/A 41943302 downstream_gene_variant
T/A 41943328 downstream_gene_variant
A/C 41943374 downstream_gene_variant
G/C 41943383 downstream_gene_variant
G/T 41943386 downstream_gene_variant
T/C 41943399 downstream_gene_variant
T/C 41943432 downstream_gene_variant
A/G 41943445 downstream_gene_variant
A/T 41943485 missense_variant p.Tyr228Asn
T/A 41943519 synonymous_variant p.Leu216Leu
A/G 41943619 downstream_gene_variant
G/C 41943680 missense_variant p.Ala195Gly
T/A 41943725 missense_variant p.His180Leu
A/G 41943788 missense_variant p.Leu159Pro
C/A 41943807 missense_variant p.Gly153Trp
A/C 41943816 missense_variant p.Cys150Gly
A/T 41943935 downstream_gene_variant
T/A 41944138 missense_variant p.Ile124Phe
G/A 41944173 missense_variant p.Thr112Ile
T/C 41944198 missense_variant p.Ile104Val
G/C 41944221 downstream_gene_variant
C/T 41944246 downstream_gene_variant
A/G 41944250 downstream_gene_variant
T/C 41944256 downstream_gene_variant
T/A 41944262 downstream_gene_variant
A/T 41944473 synonymous_variant p.Ser65Ser
T/A 41944684 downstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_02912.1
MSRLVQEKKIGAGRVVAVAIENNKTSQYAAKWAVDNLLPKEQALLLLHVRQRASSIPTPTGNLIPLDGNDDVARAYMQQMDNESKELFASFRVFCNRKSIQCKEILLDDVDITKGLIEGISKYAIELLVLGAPSRSGLVRRFRTSDVPSLVSKGAPPFCTVYIISKGKIASVKTATAKPPPRNNTLQPQQSLQTPGRMDPHLTRNPALARPSMEKVPYIVRQQPADEDDIISPFTRPGRGGSYRSYESSIADSDISFVSSGRPSVDRMFPSMYDDMDSCINPRLSTGSDFDMRSYGSSFSGAKSIDHGDYSFSSQDSGTSMSSSIFSASDEVEAEMRRLKLELKQMEMYSTACKEAMTAKQKALELQRWKVEEQRKMEEARLTEETALSMDEKEKAKCVTAMEAAETSRKIAELEARKRMTVESGHKKTTDMFSHCPARYRRYTIEEIEEATNLFSNSLKVGEGGYGPVYRCELDHTPVAVKILKPDAAQGQAQFQQEIEVLSSIRHPNMVLLLGACPEFGCLVYEYMANGSLDDCLFRRGNKRALPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPASVEDSVTQYRMTSTAGTFCYIDPEYQQTGMLGTKSDIYSLGIMLLQIITAKPPMGLTHHVERAIEKGTFAEMLDPAVEDWPIEHALRFAKLALACAEMKRKDRPDLAKVVLPELNKLRDFAEDNMPMMMMFGAPTGFGQRSNYNYSNYPISSAQNSMSDGSTSGMSGYETHSSSHD*


CDS Sequence:
>Vu_02912.1
ATGTCAAGGTTGGTTCAGGAGAAGAAGATAGGTGCAGGACGTGTGGTAGCAGTGGCAATTGAAAATAACAAAACAAGCCAATATGCAGCAAAATGGGCTGTTGATAATCTTCTTCCCAAAGAACAAGCGCTCTTACTGCTCCATGTTAGACAGAGAGCATCTTCCATTCCTACACCAACGGGAAATCTTATACCTCTTGATGGCAACGATGATGTGGCTAGAGCATACATGCAACAGATGGACAACGAATCTAAAGAACTTTTCGCTTCGTTTCGGGTCTTCTGCAATAGAAAAAGTATACAATGCAAAGAGATCTTACTGGATGACGTAGATATAACCAAGGGATTAATAGAAGGTATTTCTAAATACGCCATCGAGCTTCTGGTACTTGGGGCACCTTCAAGGAGTGGTCTTGTAAGAAGATTTAGGACATCGGATGTTCCAAGTCTTGTGTCGAAAGGGGCACCACCATTCTGTACTGTGTACATAATTTCCAAAGGAAAAATCGCATCGGTGAAAACTGCTACTGCTAAACCTCCACCACGTAACAATACACTGCAGCCGCAGCAATCTCTTCAAACTCCTGGCAGAATGGACCCACACCTAACACGCAATCCTGCCCTAGCACGACCATCAATGGAGAAGGTACCCTACATTGTCCGCCAGCAACCAGCAGATGAAGACGATATAATATCACCCTTTACAAGACCTGGTAGAGGAGGAAGTTACAGATCATACGAGTCCTCCATCGCTGACTCTGATATTTCATTCGTGAGCAGTGGAAGGCCTAGTGTTGATAGGATGTTCCCTTCAATGTATGATGATATGGACTCTTGTATAAATCCCCGGCTTTCAACAGGCTCAGATTTTGATATGAGAAGCTATGGCTCTTCATTCTCAGGAGCCAAATCAATTGATCATGGTGACTACTCATTCAGTTCACAAGACAGTGGGACATCAATGTCATCGTCCATATTTTCAGCCTCAGATGAAGTGGAAGCTGAAATGAGGAGACTGAAGCTAGAACTGAAGCAGATGGAAATGTACAGTACTGCATGCAAGGAAGCTATGACAGCTAAGCAAAAGGCACTAGAACTTCAGCGTTGGAAAGTGGAAGAACAAAGGAAAATGGAAGAGGCACGATTAACTGAAGAAACAGCATTGTCAATGGATGAGAAGGAGAAAGCAAAATGCGTAACTGCCATGGAAGCAGCAGAAACATCTCGAAAAATTGCAGAGTTGGAAGCACGAAAGAGAATGACTGTAGAATCTGGGCATAAGAAGACTACAGATATGTTTTCACACTGTCCCGCCAGGTACAGAAGGTACACTATAGAGGAAATAGAAGAAGCAACGAATTTATTTTCGAACTCTCTCAAGGTCGGTGAAGGTGGTTATGGGCCAGTCTATAGATGCGAACTAGATCACACACCAGTTGCAGTGAAGATATTGAAACCAGATGCAGCTCAGGGACAAGCACAGTTTCAGCAGGAGATTGAAGTGCTAAGTAGCATAAGGCATCCAAATATGGTTCTTCTCCTTGGAGCGTGCCCAGAGTTTGGCTGCTTGGTGTATGAGTATATGGCTAATGGAAGTTTGGATGATTGCCTATTTCGGAGGGGCAACAAAAGAGCTCTTCCCTGGCAGCTGAGATTCCGAATTGCTGCAGAGATTGCAACTGGGCTCCTCTTCCTACACCAGACAAAGCCAGAACCACTTGTGCACCGTGACTTGAAACCTGGGAATATTTTGCTTGACCGTAACTTCGTGAGCAAGATCAGTGATGTGGGATTGGCCAGGCTTGTTCCGGCTTCAGTTGAAGATAGTGTCACACAGTATCGAATGACATCAACTGCGGGAACTTTCTGTTACATTGACCCTGAGTATCAGCAAACGGGCATGCTGGGAACCAAATCTGACATTTATTCATTGGGGATCATGCTTCTACAGATAATAACAGCAAAGCCACCAATGGGTTTGACTCACCATGTCGAAAGAGCTATTGAGAAGGGGACTTTTGCGGAGATGCTTGACCCAGCCGTTGAGGACTGGCCAATTGAACATGCCTTGCGTTTTGCCAAGCTTGCCTTGGCGTGTGCAGAAATGAAAAGAAAAGATAGACCTGATCTTGCAAAGGTTGTATTGCCCGAGCTCAATAAACTCAGAGACTTTGCTGAAGATAACATGCCCATGATGATGATGTTCGGTGCTCCCACAGGATTCGGTCAAAGGAGCAACTACAACTACTCAAACTACCCCATTTCCTCAGCTCAAAACTCCATGAGTGACGGCTCAACGTCAGGAATGTCCGGATACGAAACCCACTCAAGCTCACATGATTAA


Promoter Sequence:
>Vu_02912::LG1:41944878-41946878(-)
TATATAAATGGAGATAATCCACCTAACATGTCTTATAAGATTTTGTAGGCTGGAGTTAGCCTAAATATCTTAGACATACTGTAGCTTTAACATTATTTAAAACCCTGCTTTATATATATATATACTTCTGCCTATAAAAGTGTTTTAATTCCCTAATAGTGGAAAATGTCATGGGTCTGCTTTCCGGCACATAGCTTGTCTTCAATAATCCTGTTATGCCCCATAGTGCTTGCTAAGTATCATTCTCTGGTGTTTTCCTGTAAAAATCATAGTTTTAGTTCCTTTCATAGAATAATTGGCGTGCTAGATTTGAGCTAAAACTAGCTACTTCTGTGTCGTGTTTTTATTTATTTATTTTCAATTGCTGGCTTGGTTGGAGCTAATCATATTATTATAGATGGTTCGGGTGCTTGTGGCAACCTCAATTAGAGAAGCTGCTGCTGGTGCTGAAGATGATGCCTTGATAAAGCTCATGGATGCCACGTGTAGGCGTGCTACTGCTCCTCCAGCACCCCCTGATGGTTTATGTCTAGTTGATGTTGGGTATACTGAATTTGACCCTCAAAAGTGCTTCATTCTGATAGAGTAAAGCCTTGTGCCTTCTACTTCCCATTCCTAATCACATTTACAGTGTCAGTCACACTTTCTGATTTTTAATCCAAGCTGCATTTTAATGCAATATTTTGCAATTAGATCCTCCGCCATGAAGCTGCATTTTAATGCAATATTTTGCAATTAGATCCTCTGCCATGAAGCTGCATTTTAATGCAATATTTTGCAACTAGATCCTCCGCCATGAAGCTGCACTAGATTACTTTTAAAAGTTGGCATTTTGGCTCGACTTTCTTATACATTTAGACTTTTTTATTATTATTGTTTTACACATGCAGCTGCAATTGTAGCCTCTTATATATATATATATATATATATATATATATATATATATATATATATATATATATAGCTGGGATAGTCTACTTGATAAAATGCACGAGTGTTAACGGTTTAATATATAACTAAAAGAATAAACCTCTAATAAAAACATTTTTTTTAGTGTTATTTTAATTTTTTTAATTCATTTTTTTAAAATTTAATTTAATAAAACTCACTCATTACCACCAATCATTTGAAACATGTATAAAAACGATTCTAGCTTAATCATCGGTCTCAAGCTCGAATTCTGGGTATGCAACTCAGAAGGACAAATTTGTCACTCTTATTGATCATACTGGGATTGGGTTAGTCTCATGTAAAAAATACATATAATCTCATATAAGGGTAATGCAAATTAACAATGTTAACAAATAAAAAAAAATTAAAAATAGTTATTTACTATATATATAGGTGGTTCTTGATGGAATAATAATGTAAAACATAATATATTTTTTCTTCACATAAAACATTACACATAAAATTAATGTCTAAACAAGAAAAAAATGCACATATATTTTTGAGTAACAAATAAACAACATAACATTATAAAACTAAATAAATAATAATTTGTATTTTTAATCCTATATGTAGTATATGTTTTAATTGTAACTTAGTCTGTATAAACTATTTTTTTGTTTTATAAAAGCCATGTCTAACTTCCTAAAACTAATTATTGTTTTTTTAGTGTCAAACGCTTGCTAAGATTATCGGTATGTGGTATGACTTGTGATGGAACATGTACAAGATGTTGTAGTCGTCAAAATTCACTAATTTTGGAAGGTAATAACAAACGCAAACTAATAAAGGGTTTGACACTCTGCAACAGCAGACAAAATTTCTATTAGAGTTTCGAACAATGCTTAAAATGGCGCTGACAATAGTCACATCTCGTTATAGTTATATGTACACTTAGGTTTACTAAATTGTCTCTTGGAAAGAATCAAAACCAACTATATAAACAGAAAACTTGGGGGCCAATACAAGAAGTTGGATTGAATTTATCTTGAACATCAATTTTTTTCTGAGCTGGTGAATACTTTGAAGTGTTCACAAGGAAAAAAAAAAGG


Gene Sequence:
>Vu_02912(-)
ATGTCAAGGTTGGTTCAGGAGAAGAAGATAGGTGCAGGACGTGTGGTAGCAGTGGCAATTGAAAATAACAAAACAAGCCAATATGCAGCAAAATGGGCTGTTGATAATCTTCTTCCCAAAGAACAAGCGCTCTTACTGCTCCATGTTAGACAGAGAGCATCTTCCATTCCTACACCAAGTAATCATCGAACCTAAATTTCATATAATTGATTGCTCTATGCCTATATGTATTTGTCTGAAATATAGAAGGCCAATTTTGTGACAATATCTGCACAGTGCATTGGTGGTTTAATATAATTCAAATTTATTGTTATGTGCACCATGAATTGCTCTTTTTGCAAGAGATATTTTGTGACACATAGGTGACTTGAATGATTTTGAATACAGCGGGAAATCTTATACCTCTTGATGGCAACGATGATGTGGCTAGAGCATACATGCAACAGATGGACAACGAATCTAAAGAACTTTTCGCTTCGTTTCGGGTCTTCTGCAATAGAAAAAGTGTTAGTTCTGACACATAATTGCTCCTTTCATTTCGTGTGTTCATGCCATTAAGAGGACTTGCTTTTAATGAAATGAGATTCAGTTTTGTTGTTCGGAATCTGATTTTTTTACTCTAAATTCGTTTCGTTTTCAATGTTTTTCTTCTCGATTCAAAACAGATACAATGCAAAGAGATCTTACTGGATGACGTAGATATAACCAAGGGATTAATAGAAGGTATTTCTAAATACGCCATCGAGCTTCTGGTACTTGGGGCACCTTCAAGGAGTGGTCTTGTAAGGTAAGAATTCCCTACTCAGCAAACACTAATTCAAACGAGTTTGCTTGATCTCGACCAATATAACAAACATTAGCAAAACAATATTGCAATTACAGCAATGGTTAATTGGATAAAGAGGAAAAACACATTGTATGAATTTGACTTTGTTTTAAGATCTTATTGAGAGACTTTGGCGTAAGAAGATTAGGTACAACTATGATAATAATACAGAATTCTAATATTTTAAAATTTTATTTATTGCAGAAGATTTAGGACATCGGATGTTCCAAGTCTTGTGTCGAAAGGGGCACCACCATTCTGTACTGTGTACATAATTTCCAAAGGAAAAATCGCATCGGTGAAAACTGCTACTGCTAAACCTCCACCACGTAACAATACACTGCAGCCGCAGCAATCTCTTCAAACTCCTGGCAGAATGGACCCACACCTAACACGCAATCCTGCCCTAGCACGACGTATGCGAATTTCTCTTTTAATCCTCTTTGTCTAAAATTTTCTAATTTTTGGTAACATTGTTCATAAAACACTGGATTCGTATGTATATATGACAGCATCAATGGAGAAGGTACCCTACATTGTCCGCCAGCAACCAGCAGATGAAGACGATATAATGTAAGTACCACGTGAATCCATAGTTGGAGTGACATAAAGTTATTATGAAAAAAACATAGCACACTTCAATTTCATAATATATAGATACACAAGCAACCCATCCATTTTAGGAAATTTCTTTCACAGTACAAAAGAAAACCAGAAATCATTCATGATGTGATTGGAGTAGAAACCTTGCATGTTCAAATTTCAAAATCAAATAAGCTGTAATAACTTCATTTCCATTTAAGGAGAACAAGAATGCTAATTACCAACTTCAATGTGTTCTACAATGGAGATGTACATGAGAGTTTGAGATTGATGATTATTAAGCTTCAGAAAGATTTCAGGGCTTACTGAGAGGACTAACTTGATATTCTGTTGACAGATCACCCTTTACAAGACCTGGTAGAGGAGGAAGTTACAGATCATACGAGTCCTCCATCGCTGACTCTGATATTTCATTCGTGAGCAGTGGAAGGCCTAGTGTTGATAGGATGTTCCCTTCAATGTATGATGATATGGACTCTTGTATAAATCCCCGGCTTTCAACAGGCTCAGATTTTGATATGAGAAGCTATGGCTCTTCATTCTCAGGAGCCAAATCAATTGATCATGGTGACTACTCATTCAGTTCACAAGACAGTGGGACATCAATGTCATCGTCCATATTTTCAGCCTCAGTAAGAACTATATATATATATATTATAATCAATACGCCAAAACAATCATGATTGGTTTTCTAACTGTTTCAAGACCAAGATTTGACAAATATCTTCACTAAACCATAGGATGAAGTGGAAGCTGAAATGAGGAGACTGAAGCTAGAACTGAAGCAGATGGAAATGTACAGTACTGCATGCAAGGAAGCTATGACAGCTAAGCAAAAGGTACCTTACAAATTTTTATTTAGTCCAAACATGCAAATTCTAAGAATACGACTGCCATCTCATGGAATTGATAAATGTAATCTATTAAATATGTACTGACTTATTAGCACTATTCTCCAAAAGGCACTAGAACTTCAGCGTTGGAAAGTGGAAGAACAAAGGAAAATGGAAGAGGCACGATTAACTGAAGAAACAGCATTGTCAATGGATGAGAAGGAGAAAGCAAAATGCGTAACTGCCATGGAAGCAGCAGAAACATCTCGAAAAATTGCAGAGTTGGAAGCACGAAAGAGAATGACTGTAGAATCTGGGCATAAGAAGACTACAGATATGTTTTCACACTGTCCCGCCAGGTACAGAAGGTACACTATAGAGGAAATAGAAGAAGCAACGAATTTATTTTCGAACTCTCTCAAGGTCGGTGAAGGTGGTTATGGGCCAGTCTATAGATGCGAACTAGATCACACACCAGTTGCAGTGAAGATATTGAAACCAGATGCAGCTCAGGGACAAGCACAGTTTCAGCAGGAGGTATGGAAAACGAGAACAGAAACTTGTACATGATCTATGTCCAATAGAACCTTTATTATCGTGTTTCTATCCCTTGTCATTTGAGGTAATCAATGGACTATGGCTGAATGAATGTCTTTTGAATTTGGTGCGTGCAGATTGAAGTGCTAAGTAGCATAAGGCATCCAAATATGGTTCTTCTCCTTGGAGCGTGCCCAGAGTTTGGCTGCTTGGTGTATGAGTATATGGCTAATGGAAGTTTGGATGATTGCCTATTTCGGAGGGGCAACAAAAGAGCTCTTCCCTGGCAGCTGAGATTCCGAATTGCTGCAGAGATTGCAACTGGGCTCCTCTTCCTACACCAGACAAAGCCAGAACCACTTGTGCACCGTGACTTGAAACCTGGGAATATTTTGCTTGACCGTAACTTCGTGAGCAAGATCAGTGATGTGGGATTGGCCAGGCTTGTTCCGGCTTCAGTTGAAGATAGTGTCACACAGTATCGAATGACATCAACTGCGGGAACTTTCTGTTACATTGACCCTGAGTATCAGCAAACGGGCATGCTGGGAACCAAATCTGACATTTATTCATTGGGGATCATGCTTCTACAGATAATAACAGCAAAGCCACCAATGGGTTTGACTCACCATGTCGAAAGAGCTATTGAGAAGGGGACTTTTGCGGAGATGCTTGACCCAGCCGTTGAGGACTGGCCAATTGAACATGCCTTGCGTTTTGCCAAGCTTGCCTTGGCGTGTGCAGAAATGAAAAGAAAAGATAGACCTGATCTTGCAAAGGTTGTATTGCCCGAGCTCAATAAACTCAGAGACTTTGCTGAAGATAACATGCCCATGATGATGATGTTCGGTGCTCCCACAGGATTCGGTCAAAGGAGCAACTACAACTACTCAAACTACCCCATTTCCTCAGCTCAAGTGAGTCACTGTCATTAGTTACTTTTTGTTTCTTTAGCTTATATTATGGCCACTAACATCATATGTTTATCTCGTAGAACTCCATGAGTGACGGCTCAACGTCAGGAATGTCCGGATACGAAACCCACTCAAGCTCACATGATTAA