Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02894 LG1 41752548 41753518 PREDICTED: transcription factor MYB1R1-like isoform X2
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus
Molecular Function   enables   DNA binding, zinc ion binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
C/T 41752938 intron_variant
C/T 41753249 intron_variant
T/C 41753257 intron_variant
C/T 41753279 splice_region_variant&intron_variant
T/C 41753353 synonymous_variant p.Cys179Cys
A/T 41753444 stop_gained p.Lys210*
A/C 41753445 missense_variant p.Lys210Thr
T/C 41753448 missense_variant p.Leu211Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_02894.1
MGRKCSHCGVIGHNSRTCTSLRGSSFVGLRLFGVQLDTCVTIKKSFSMDSLPSSSSSSFSSSRITIDENSDRTSFGYLSDGLIGRVQERKKGVPWTEEEHRIFLVGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRLATIDKKKRRSSLFDVVGSNNVGGCNSVSGYHKKDDSKCEVKNSDATLSLLGRITYFQQESKSDYKKQEKLENCPHQVPNLELTLRSCLGQLV*


CDS Sequence:
>Vu_02894.1
ATGGGGAGGAAGTGCTCGCATTGTGGAGTTATAGGGCATAATTCAAGGACCTGCACATCTTTGAGAGGCTCTTCTTTCGTTGGACTTCGTCTCTTTGGCGTGCAATTAGACACTTGTGTTACCATCAAGAAAAGCTTCAGCATGGACTCCTTACCCTCTTCATCATCTTCCTCATTTTCTTCTTCAAGAATAACCATCGATGAAAACTCTGACCGAACCTCTTTTGGGTATCTATCAGACGGTCTCATAGGTCGAGTTCAAGAGAGGAAGAAAGGAGTGCCATGGACAGAAGAGGAACACAGAATATTCCTTGTCGGACTGGAGAAGCTGGGAAAGGGTGATTGGAGGGGAATCTCCAGAAACTTTGTGACCACAAGAACTCCAACACAAGTGGCAAGCCATGCTCAGAAGTACTTTCTTAGATTGGCAACTATAGATAAGAAGAAGCGACGTTCTAGTCTCTTTGACGTGGTCGGTAGCAACAACGTAGGAGGTTGTAATTCAGTTTCGGGTTATCATAAAAAAGATGATTCGAAATGTGAAGTTAAGAATAGTGATGCGACTTTGTCGTTGCTAGGGCGCATAACCTACTTTCAACAAGAAAGCAAATCGGATTATAAGAAGCAAGAAAAGCTTGAAAATTGCCCTCATCAAGTTCCTAATCTGGAGCTTACTCTTCGTTCCTGCTTGGGACAATTAGTGTGA


Promoter Sequence:
>Vu_02894::LG1:41750548-41752548(+)
CAAAATTTAAAAGTCCAGCTAAAATTTAAGTTTAGATTAGCCGAATTTAATATATGCGAAAATAACTAGAAATGTAAAGAAAAAAATAAATGAGACAACAGCATATATATGTGACTCAATAAGAAAAGGAATTAATAAAAATTCGTTAGTAAGTTATATTTATAACATAGAATGAATTTATTATTCTATGTTCGAGTTAAACAATTCAAGGTGAGAATTCTCGATAGTTATTTTTCAAACGGCAGAAAACCCTGATTTGAGCGATATGTTCATTGCTTAATTATTTGTAAATTGTAACCATATGCATATGTTTTTCTCTTAATGTGTTATTTTCTTTTGTAGTTTTTATATTTGCAATTCTTGATGTGATGTGTTTAATAGTTTAGAGAAAAACTAACAGGGATTTTATTTAATCTGCTTTTGAATTTAGGTAACTGTATGCTCTGACGTTAGAGCTTATTGACAAACTTAAACAATTGGTGTTATATGATAATACCAATAATCATCCAACACAGAAAATAAAAAAGTAAATATAGGACAATTAACGAGATGCATTTAATAACTTTTTTAAAATTTAATTTGTAAAAAAAAGTGACTTATCAACAAAATAACACTATTAAATAAAGAGTTAATAAACTACCTTACTTTTTATAGTTAATTAATAAGCGACTTTACTTGGTATCTCACTAGAAATACTCTTGTAACCGTGTTATTGTTTCTTGCAACTTATGTATGTATTTATTTTTCTAATTGCTTGATTGTACGAAAATACATAAACAAAACCATTACAATAACAATTACAACTATGACTATGAAACAAGTAAGAAAATATGACCCTCTTGCAATGAAATTAATCTACTATCAAATCTTTGAATAAACAGACCAACCCACAAAATGGTTTAGTGTTTTGACTTTGAACAGTATTACCAAGCATATACTGCCTAAATACCTTAAAGTTTGTCGTAATCTATGAGTTGGGATAACAAAAAAAGAGTTAAAGTGAACCTAATTATCGATCCGATTTAATTAGTTAATTAATTAAATTGTTAAAAAATATTATATTTTCATTATATAAATAAACAATAAGTTTTCAGAAGAAGTAAATTATGGTTTGTGTATAAATTTATCTGGAAAGTCAAAATAGTTTTATGATTTCATCACGTTCACTTCACGTTTTTAAATAACAGTGTGAATTTGATATGCGTTTTGCAAGTCCCTTCGAATAATGAAATTTTGGTTGACGGAGACAACTTTCAAAGTCTTCCTCTCCATACATACATACACACACCATATATATAATATATATATATATATATATATATATATATATATATATATATATATATATATATTCTTGAGTCATACAAAGACCAACCTTGATTGAATGAAGAGAAATTCCTGATAGTCTTGCTTTTACACTCTAATTCAATATTCATGTGTTGAACAAGAATATGCATGGAACAAATTAAAAGAAAAACAAGTAGTTAATTACGTGGCACCTTAATTAAGTCTACCAAGAGAAGAATATATATATGTTTTTATGGTAAAGTTAATTAGACCATATAGAAGAAAGAGAGTTCTATAAATTACTCTGATACAATATCATTATATCCATTAATCATAAAATAAGTTGAAGGTTGGATAGAGGGATCCTGTGTAGTCCCAGAGGACATAAATGCTCCAAATAAGATAAGGTATCCCTATCTTTATGATTTATTTATTTTTATTTTTATAATATGGAAAAAGTTGTAAAAATATCCAACAATAAACTATATCCATCCAATCAAATTTCGTGGGTGTCACTACGTTTTCATTAACCCCACACATTACTCCATCATCATCATATATACCTTCAAACCAAACCATTTTTCTGCTCTCTCTCTCTCTTTCTCTCTTTCTTTCTCTCTAACATACACACACTAATTACATGCATATACATCATAAAGTTTGGTTTTTGATTTGAGGGGGTTTCAGAAAATCTGAATCTGGTGAAGAGAAAA


Gene Sequence:
>Vu_02894(+)
ATGGGGAGGAAGTGCTCGCATTGTGGAGTTATAGGGCATAATTCAAGGACCTGCACATCTTTGAGAGGCTCTTCTTTCGTTGGACTTCGTCTCTTTGGCGTGCAATTAGACACTTGTGTTACCATCAAGAAAAGCTTCAGCATGGACTCCTTACCCTCTTCATCATCTTCCTCATTTTCTTCTTCAAGAATAACCATCGATGAAAACTCTGACCGAACCTCTTTTGGGTATCTATCAGACGGTCTCATAGGTCGAGTTCAAGAGAGGAAGAAAGGTATCGTTATGTTTCTTTCTTCTTTCAATCTTCTTTCTTATGTTTTTTTTTTTGTTGTTTTTCATCTTTCCAACCTTCCTGGAAAATCTTTAGACTACTTTTCCTTGATTTTTAGCCACATAGTATCTACCATTTCATCGAATAACATCTAACATTGGTGTTATGCATATCTATCAGGAGTGCCATGGACAGAAGAGGAACACAGAATATTCCTTGTCGGACTGGAGAAGCTGGGAAAGGGTGATTGGAGGGGAATCTCCAGAAACTTTGTGACCACAAGAACTCCAACACAAGTGGCAAGCCATGCTCAGAAGTACTTTCTTAGATTGGCAACTATAGATAAGAAGAAGCGACGTTCTAGTCTCTTTGACGTGGTACATATATGCAAAAACTTAACCATGTTTATGTTTCTCTTTACACTGAAAAGCTATTTACTTTTTCTCTTTTCCTTCTACTTCAGCAGGTCGGTAGCAACAACGTAGGAGGTTGTAATTCAGTTTCGGGTTATCATAAAAAAGATGATTCGAAATGTGAAGTTAAGAATAGTGATGCGACTTTGTCGTTGCTAGGGCGCATAACCTACTTTCAACAAGAAAGCAAATCGGATTATAAGAAGCAAGAAAAGCTTGAAAATTGCCCTCATCAAGTTCCTAATCTGGAGCTTACTCTTCGTTCCTGCTTGGGACAATTAGTGTGA