Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02893 LG1 41736091 41739858 PREDICTED: inactive protein kinase SELMODRAFT_444075-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 41736141 5_prime_UTR_premature_start_codon_gain_variant
T/C 41736175 5_prime_UTR_variant
T/A 41736252 5_prime_UTR_variant
G/T 41736261 5_prime_UTR_premature_start_codon_gain_variant
T/A 41736267 5_prime_UTR_variant
G/A 41736308 5_prime_UTR_variant
T/A 41736309 5_prime_UTR_variant
C/A 41736345 5_prime_UTR_variant
A/G 41736410 5_prime_UTR_variant
T/G 41736680 intron_variant
T/*,C 41736687 intron_variant
T/A 41736782 intron_variant
T/A 41736876 intron_variant
T/G 41736877 intron_variant
A/G 41736897 intron_variant
T/C 41736902 intron_variant
G/T 41736980 missense_variant p.Lys64Asn
C/T 41737645 synonymous_variant p.Ser217Ser
A/T 41737758 missense_variant p.Gln255Leu
G/A 41737930 synonymous_variant p.Gln312Gln
G/A 41737972 synonymous_variant p.Leu326Leu
T/C 41737996 synonymous_variant p.Asp334Asp
G/A 41738011 synonymous_variant p.Leu339Leu
A/G 41738029 synonymous_variant p.Lys345Lys
A/T 41738030 missense_variant p.Ile346Phe
C/T 41738056 synonymous_variant p.Val354Val
G/A 41738129 missense_variant p.Ala379Thr
C/T 41738236 synonymous_variant p.Ser414Ser
G/A 41738262 missense_variant p.Gly423Glu
G/C 41738278 synonymous_variant p.Val428Val
A/T 41738293 missense_variant p.Leu433Phe
G/C 41738294 missense_variant p.Ala434Pro
G/T 41738396 stop_gained p.Gly468*
G/C 41738476 intron_variant
A/G 41738505 intron_variant
A/G 41738522 intron_variant
C/G 41738529 intron_variant
T/A 41738567 intron_variant
T/A 41738571 intron_variant
C/T 41738589 intron_variant
A/G 41738609 splice_region_variant&intron_variant
T/C 41738851 intron_variant
T/G 41739117 synonymous_variant p.Gly589Gly
C/A 41739203 splice_region_variant&intron_variant
C/A 41739277 intron_variant
T/C 41739278 intron_variant
A/T 41739286 intron_variant
G/A 41739307 synonymous_variant p.Arg618Arg
C/G 41739374 missense_variant p.Gln641Glu
A/T 41739454 splice_region_variant&intron_variant
G/A 41739470 intron_variant
G/A 41739551 synonymous_variant p.Leu668Leu
A/G 41739709 3_prime_UTR_variant
A/G 41739767 3_prime_UTR_variant
C/T 41739852 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_02893.1
MSSQKGRHEEEMGTSETTGKVVVVAVKASRDISRTALVWALTHVVQPGDCIKLLVVIPALSSSKRVWGFSRFTTDCASSNWRSSLGTASDQKEVITKSCSQLVLQLHDFYDPEKIKIRVKILSGSSCGGVAAEAKRVESSWVILDKKLKHEKKYCMEQLHCNIVMMKRSRPKILRLNLNSSPKMELNMGCPLKLRRNLKENTGHGGIIRGPAVTPASSPEQGSPPLTATDVGTSSISSSDPATSPFFHSDNYERQRRGFTFVHEGLTNLEDIESDSESEKLSMSSKSSYFQPWIANVICMDGDFSKHEDNVQRSSDKTLATAYEALLQKFSKLDEDPILGMLNCKIDVNLSKSVREAISLAKGSPPGPPPLCSICQHKAPVFGNPPRWFTFAELQLATGGFSQANFLAEGGFGSVHRGVLHDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVENGRRLLVYEYICNGSLDSHLYRRKQNVLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELITGRKAVDINRPKGQQCLSEWARPLLEKQAIYKLVDPSLRNCYVDQEVHRMLQCSSLCIGRDPHLRPRMSQVLRMLEGDILL*


CDS Sequence:
>Vu_02893.1
ATGAGCAGCCAAAAGGGTCGTCATGAAGAAGAGATGGGCACCTCAGAAACCACCGGGAAAGTGGTTGTGGTTGCAGTTAAAGCTTCCAGAGATATCTCAAGGACTGCTCTGGTGTGGGCTTTGACTCATGTTGTTCAACCAGGGGATTGCATTAAGCTGTTGGTGGTCATTCCGGCTCTTTCTTCAAGCAAGAGGGTATGGGGATTTTCAAGATTTACCACTGACTGTGCCTCCAGTAATTGGAGATCCAGTTTAGGAACTGCTTCAGATCAGAAAGAAGTTATAACAAAATCCTGTTCTCAGTTAGTGCTTCAACTCCATGATTTTTACGATCCAGAGAAGATAAAGATCAGAGTGAAGATTCTTTCTGGTTCTTCATGTGGAGGTGTGGCCGCTGAGGCCAAGAGAGTTGAGTCAAGCTGGGTTATATTGGACAAAAAGTTGAAGCATGAAAAGAAATACTGCATGGAGCAGCTGCATTGCAATATTGTAATGATGAAGCGGTCTAGGCCAAAGATTCTGCGCTTGAATTTGAACAGTTCACCTAAGATGGAACTGAACATGGGTTGTCCATTGAAACTCAGAAGAAACTTGAAAGAGAACACTGGACATGGAGGTATAATCAGAGGTCCAGCTGTTACTCCTGCTAGCAGTCCTGAACAAGGGTCACCACCATTGACTGCAACTGATGTTGGAACATCATCAATATCAAGCTCAGATCCTGCTACTTCCCCATTTTTTCACTCTGACAACTATGAGAGACAAAGGAGAGGTTTCACCTTCGTTCACGAGGGACTGACAAACCTAGAGGATATTGAGTCTGACTCCGAGAGCGAAAAGCTTAGCATGTCGTCCAAGAGTTCATATTTTCAGCCATGGATTGCGAATGTGATTTGCATGGATGGTGATTTCTCAAAGCATGAAGACAACGTGCAGAGATCCAGCGACAAGACTTTGGCAACTGCATATGAAGCTTTGCTTCAGAAATTCTCAAAGTTGGATGAAGATCCTATACTGGGAATGCTTAACTGTAAAATTGATGTGAACTTGAGCAAAAGTGTCAGAGAAGCAATTTCACTAGCTAAAGGTTCACCTCCTGGCCCTCCTCCACTGTGCTCCATTTGTCAGCACAAGGCACCGGTGTTTGGAAATCCACCAAGGTGGTTTACATTTGCTGAATTGCAGCTTGCCACGGGTGGTTTTTCACAAGCAAACTTCTTGGCAGAAGGTGGTTTTGGTTCCGTACACCGTGGAGTTCTGCATGACGGACAAGTCATTGCTGTGAAACAGTATAAATTAGCCAGCACTCAAGGAGATAAAGAGTTTTGCTCAGAAGTTGAGGTCTTAAGCTGTGCACAACATCGCAATGTTGTGATGCTAATTGGGTTCTGTGTGGAGAACGGAAGAAGATTGCTGGTTTACGAATACATCTGCAATGGCTCTCTGGATTCTCATCTCTACAGACGAAAGCAGAATGTTCTGGAATGGTCTGCAAGACAAAAGATTGCAGTTGGAGCAGCACGTGGTTTGAGATACCTTCATGAAGAATGTAGAGTGGGTTGTATTGTGCACCGTGACATGAGGCCCAATAATATCCTCCTCACTCATGATTTTGAAGCTTTGGTGGGAGATTTTGGACTTGCTAGGTGGCAACCAGATGGAGACATGGGTGTGGAAACCAGAGTGATAGGAACATTTGGGTATTTGGCGCCAGAATACGCTCAGAGTGGTCAAATTACTGAAAAAGCTGATGTGTACTCGTTTGGTATAGTACTGCTGGAACTCATCACAGGAAGAAAAGCAGTGGATATAAACCGCCCCAAAGGCCAACAATGTCTCAGTGAATGGGCACGGCCATTGCTTGAAAAACAAGCTATTTATAAACTAGTAGATCCGAGTTTAAGAAACTGCTATGTTGATCAAGAGGTACATCGCATGCTGCAATGTTCCTCTTTATGCATTGGACGGGATCCTCATTTAAGGCCTCGAATGTCACAGGTGCTGAGGATGCTGGAAGGTGACATTCTACTGTGA


Promoter Sequence:
>Vu_02893::LG1:41734091-41736091(+)
GCATACACATGAGTACAAGCATGAAAATTGACAATAAAAGTTGTTATTTAACAGAACATGGGCTGGAATCTATCTCTCATAAGGATGAGTATAAATATACTTTACTACCTTACTATAATATTATTACCTATCAGCTTGTGTATTACAATTAAATCACGATATCTTTATTTAATTTTTGGTATCTTTTGAAAGTCTTTGCAAGTCTTTGACTAAAAGAAAAAGAAAACACTGTACTGTTGTATTTTTGTTAGGATGGTAATAATAAATAGTGAGATCTACAAGTGAACTCACAATTTTTTTTAATGATAATCTCAGTCAAATTTTACATAATATAAATTTGTATAAATATGTTATTTAATTATTAATATTATATATATATTGAAGGCTTAATTAAATTTTAACTTTTAATAAATTTAGATATTTTTAATTCAGTTTCTATTAAATTTTTATAGTACTAAAGAAGTTATACTTTTTAATTAAGTTTTTATTAATTAATATTTTTTAACTAAGTGAGATGATAATTATCCCTTCTCATTATCTTACTTAATTGTCTTCACATGTTATTTTGGGTTTAGTTTTGTTGAATATATCATGTGATTTTTTATGATTGGATCACAAAAACTAAAATAAATAAAAAAGTAAGTTTAATTGAAAAATATAGAATTTTGAATATTAAATAAACAAAAAAATTAATAAAGAATGAATTGAAACTTAAAATAACATGATCAACTCTGAAATAATTTTGCATCATCATCTAACTAATGAGAACATAGATTCAAGAATTAGGTTCATTAAATTTGAATTATTTAAAAAATGATTAAAAGTATAGTTTATCTAAGTTTAATATTTGATGTAAACCATTCCTAACTTACATACACGTGTTTATTATATAATAGACATATTAGATATCCTGTTAAACTTTGATCCTATATTAAGACATAAGTTCCTTATTGTTGCTAAGATAGATGTGTACTTGAATTCACGAAACTAGTGTCTTATCAGTCTATGCCATCTTGGCTATATATATGAGAGAGACAGAGAGAGACAGAGAGATCATAACCCATTTGAAACAGTTTCAGCCAAGTATATCTTGATTGTTATAAATCTGCAGTGCAGACATAGTCCATTGAATATGCATATGCACTATGGAGTGCTCTGTAATGACATCACTCTTTCACTTCAACCATGAATGCTTCTTGACCCCCACCAAATGTATACCAAGCAAAGTGGGCATAATGGAGTCAATGGTGTGGCCTTAGGCCATCCTTTCACAAAGGAAAACTTTTCTCCCTTTAATAATACCAATTGCCACCATGAAAGCAACACCCTACTAAATATTTCTCATTTCAGCTCTTTCTATGTTTTGGTATTTATTGCACCTTCTTCTGCCAAATGTTGAGTGGGAATTCACTTCAACTGAGCTGTAATTTTGAGCTCAAAACTGCTAAATTAAATAATCTTTGTAATTGGAATTTTCAAAGACTTCAGTTAGTTCAATGCCTTGTAACTCGCACAAGATGCACCTCCCCACTTAGTTAAAAAAAAAAATCCACATGTCGTGTCATCAATGTCACTCCATTTGACAACTATAAGAGTGATTTCTAAGCAAAACCTTTGTGATCATTTGCTCATAGTATAATACTACTAGTACTTTTAATATCCATTTCCCTCGGTTCAAGCGACATATTTTACACTGCTCTCATTCATGTACTACCTTTTTCATCTCATAATTTTCGGTAACCGGAAATGGCTTGAACTTTTTTGGGTTTCTAAGAAGGGAACTAACTTCGGTGGTTTACATGATTAACATGACATGGGCCTTTTTCATTCATTTTTGGGATTAGTGAACAGAATTTGTCTCTACACTCTCACCTAAAAACTGTCCATTTCTTCCTGTCCTTATTTGATTGGAAATGATCCCTTTTTTTAATTTCAATTTTCAAAGGCGCTTGTTGTCTCAATCATAATACATAATATGTCAGAAGAAAATGGTAATAATA


Gene Sequence:
>Vu_02893(+)
AAGAGATGGATGGGGTAATGGATTCTGTTCCCATGGTCTCACGCACTCAACGTGAATTGGGCATCCCTGGTTTGTAATTTTATGTCATGTAATGTAACAAAATCTGTCCTTTCTTCTGTAGCAGTGGAGTCACTGTTAAGCGTGGATTTTCACTTGTGCTTTAACTGGAAGGTTGTTTAACTAAAGTGCCTTGAAGTGTGTGGCCTTCTACTTTTTCGTTTCTGGGTAACACAAAAGAAGAAGACCTTGGTTTCCGAGGGTGTTTGTTGTCACTGTTCATCGCTGCAAAGTTGCAATATTTTGGCTGATTCAGCGTTTCAGATGGCTTTTGGTGGTTGATTCTCCTACCAAGTTGAGAATTTGAGATGAGCAGCCAAAAGGGTCGTCATGAAGAAGAGATGGGCACCTCAGAAACCACCGGGAAAGTGGTTGTGGTTGCAGTTAAAGCTTCCAGAGATATCTCAAGGACTGCTCTGGTGTGGGCTTTGACTCATGTTGTTCAACCAGGGGATTGCATTAAGCTGTTGGTGGTCATTCCGGCTCTTTCTTCAAGTATTGCTTACTTTTCTTCATTCTCTCTCTCTCTCTCTCTCTCTTTTTTTCCTTTTAATTTATATCTGATTGGTTTGGCTCTTTCTTAGTTACATTACTCAGTTTAGTTTCACATTAATGGCTTTATAAAACTGAGTTATAGAAAAAGTAAACTAGAAGATGAATACAGAGAATGAGGCACTGGTTGGCACATTCTACGCAATTCTGTTTTGAACCTTCAAATATGTAAGGCTTTAGGACCTCGGCGTTGCTAGAGATCTGAACAATCCAGAAACCTGTTCTACTCATTCTTGTATCGAGGTTCATAACTGACTACAATTTCTGCATTTGCAGGCAAGAGGGTATGGGGATTTTCAAGATTTACCACTGACTGTGCCTCCAGTAATTGGAGATCCAGTTTAGGAACTGCTTCAGATCAGAAAGAAGTTATAACAAAATCCTGTTCTCAGTTAGTGCTTCAACTCCATGATTTTTACGATCCAGAGAAGGTTGGGACATACATAACATTGTAATAGCTTCCATATATGCATATTCTTTCTTTCTTTCTTTATGTCTAGTGTTCGGTTTTCCTAAACTGTCAAACAATTTACACAGATAAAGATCAGAGTGAAGATTCTTTCTGGTTCTTCATGTGGAGGTGTGGCCGCTGAGGCCAAGAGAGTTGAGTCAAGCTGGGTTATATTGGACAAGTAATTTTTAACTTTCTTTGTTAAAGGCTGCGTTGTTGCTTGATACATCTGTGAAGTTTTCCCAATTACTCATACACCGAAGATGATTGTCTATTTGCAGAAAGTTGAAGCATGAAAAGAAATACTGCATGGAGCAGCTGCATTGCAATATTGTAATGATGAAGCGGTCTAGGCCAAAGATTCTGCGCTTGAATTTGAACAGTTCACCTAAGATGGAACTGAACATGGGTTGTCCATTGAAACTCAGAAGAAACTTGAAAGAGAACACTGGACATGGAGGTATAATCAGAGGTCCAGCTGTTACTCCTGCTAGCAGTCCTGAACAAGGGTCACCACCATTGACTGCAACTGATGTTGGAACATCATCAATATCAAGCTCAGATCCTGCTACTTCCCCATTTTTTCACTCTGACAACTATGAGAGACAAAGGAGAGGTTTCACCTTCGTTCACGAGGGACTGACAAACCTAGAGGATATTGAGTCTGACTCCGAGAGCGAAAAGCTTAGCATGTCGTCCAAGAGTTCATATTTTCAGCCATGGATTGCGAATGTGATTTGCATGGATGGTGATTTCTCAAAGCATGAAGACAACGTGCAGAGATCCAGCGACAAGACTTTGGCAACTGCATATGAAGCTTTGCTTCAGAAATTCTCAAAGTTGGATGAAGATCCTATACTGGGAATGCTTAACTGTAAAATTGATGTGAACTTGAGCAAAAGTGTCAGAGAAGCAATTTCACTAGCTAAAGGTTCACCTCCTGGCCCTCCTCCACTGTGCTCCATTTGTCAGCACAAGGCACCGGTGTTTGGAAATCCACCAAGGTGGTTTACATTTGCTGAATTGCAGCTTGCCACGGGTGGTTTTTCACAAGCAAACTTCTTGGCAGAAGGTGGTTTTGGTTCCGTACACCGTGGAGTTCTGCATGACGGACAAGTCATTGCTGTGAAACAGTATAAATTAGCCAGCACTCAAGGAGATAAAGAGTTTTGCTCAGAAGTTGAGGTCTTAAGCTGTGCACAACATCGCAATGTTGTGATGCTAATTGGGTTCTGTGTGGAGAACGGAAGAAGATTGCTGGTTTACGAATACATCTGCAATGGCTCTCTGGATTCTCATCTCTACAGTAAATTCCTCTGCATTTTGTTGACTTCTTATGATAACAATGACATCTAAGATAGTTTTTTCAGTAGTTGGCCTTCACAGTGTGAACATTTTTCCATGAAAATCTTCCTATGCATTGAGAGAAAATGAAATTCTAAGGGATGATTTGGATTTACAGGACGAAAGCAGAATGTTCTGGAATGGTCTGCAAGACAAAAGATTGCAGTTGGAGCAGCACGTGGTTTGAGATACCTTCATGAAGAATGTAGAGTGGGTTGTATTGTGCACCGTGACATGAGGCCCAATAATATCCTCCTCACTCATGATTTTGAAGCTTTGGTACGTTTTTTTCTTCAATTTTGAAATGTACTAAGCAGTGTTATTATGGTATTAGGTATGTTTTATTATATGCAATGTGTGAAGTAACTGGTGTGATTGATGTTAGGTGGGAGATTTTGGACTTGCTAGGTGGCAACCAGATGGAGACATGGGTGTGGAAACCAGAGTGATAGGAACATTTGGGTAGTGGGAAATGAAACTCAATTTCTTTTTCTCCCTTTTTCCTTTGATTAGTTGTAAAAAAGGTTATGATGATGAAAACTTTTCTTCTTTAAAGGTATTTGGCGCCAGAATACGCTCAGAGTGGTCAAATTACTGAAAAAGCTGATGTGTACTCGTTTGGTATAGTACTGCTGGAACTCATCACAGGAAGAAAAGCAGTGGATATAAACCGCCCCAAAGGCCAACAATGTCTCAGTGAATGGGTAACATTTATTTTTAAGTCCCAAATCGAGTAATGTAAATCTTCTACTTCTTATCGTTCTTACCCACTTTAATCAATTCTATCTTTTAAAATCTGTTGCACAGGCACGGCCATTGCTTGAAAAACAAGCTATTTATAAACTAGTAGATCCGAGTTTAAGAAACTGCTATGTTGATCAAGAGGTACATCGCATGCTGCAATGTTCCTCTTTATGCATTGGACGGGATCCTCATTTAAGGCCTCGAATGTCACAGGTAGGAAAAGCGATTAACGTCTTCATGGTTGAATCATTACATTTCTCTCTTAACATTTTTTCATTCTCACCGTTTTATCTTTTGTTATATGTAGGTGCTGAGGATGCTGGAAGGTGACATTCTACTGTGATTGCATATCCAATTTTCCATTTCCCAGGAACATTAGCGTAGAACTAGAACACGAACATGAACAAGGATAATCAGAATGACAACATTATTGTCTTGTGAGAAATTTCAGGAGGATGCAGAAGTTTGAAACTGAATTTATGTTGTAAAAAGCTTAGTTTTTTCTGTTAGATTTTTTAGCGATGCTGTAAATATTATCTTCGATTTTGTGGAGAGGAGCGTAATTGGAAGTGGTGTTAATTATTTAGTTCATTGTACATAACAACATTTCAGTCTTCGTT