Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_02831	LG1	41162448	41163008	PREDICTED: agamous-like MADS-box protein AGL29	Map

Annotations

category	relationship type	keyword
Biological Process	involved in	regulation of transcription, DNA-templated, regulation of transcription by RNA polymerase II, regulation of transcription by RNA polymerase II, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription by RNA polymerase II, regulation of transcription, DNA-templated, regulation of transcription by RNA polymerase II
Cellular Component	located in	nucleus
Molecular Function	enables	RNA polymerase II cis-regulatory region sequence-specific DNA binding, protein dimerization activity, RNA polymerase II cis-regulatory region sequence-specific DNA binding, DNA-binding transcription factor activity, DNA-binding transcription factor activity, DNA-binding transcription factor activity, RNA polymerase II-specific

No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_02831.1

MGRRKIDIAEVKDPNSKQVTFSKRRSGLFKKACELSVMCGVELAIVMFSPGKKPHSFGHPSVNAVADKFLRKKRTSNVVGANYVRENDAPNEVDGMERLSQQLFSVEVHINEEHKKATELDKREKEQEASQAQNKELQNSPVLQRMVEDYVDAIEVSECMLLLAKEPVIGISNRAITKRRRRRRRN*

CDS Sequence:
>Vu_02831.1

ATGGGTCGTCGTAAGATTGATATCGCAGAGGTGAAGGATCCCAACAGCAAGCAAGTTACATTCTCCAAGCGCCGCTCAGGTTTGTTCAAAAAGGCATGCGAATTGTCTGTAATGTGCGGTGTAGAACTTGCTATTGTTATGTTCTCTCCTGGGAAAAAGCCTCACTCTTTTGGCCACCCAAGTGTTAATGCTGTTGCAGACAAATTTCTTCGGAAGAAGCGAACGTCAAATGTTGTCGGAGCAAATTATGTACGAGAAAATGACGCACCTAATGAAGTTGATGGCATGGAGAGGTTAAGCCAGCAGTTATTTTCCGTTGAAGTTCACATAAACGAGGAACACAAGAAGGCAACGGAACTTGACAAGAGAGAGAAAGAACAAGAAGCTTCACAAGCCCAAAACAAAGAATTGCAAAATTCACCAGTGCTCCAGCGTATGGTGGAAGATTATGTTGATGCGATCGAGGTCTCAGAGTGTATGTTGCTTCTGGCAAAAGAACCTGTAATTGGAATATCAAATCGTGCAATTACCAAGAGAAGAAGAAGAAGAAGAAGGAATTGA

Promoter Sequence:
>Vu_02831::LG1:41160448-41162448(+)

CATGATGATATGCTTCTAGCAGCTTGTAAGTGAATGTGACAAATTTAAAAAATGATTTTAGATAGTGTAAAATTGAGAATGGAATGATGAACTCATTGACATTCTTGTGAATTGTGCAGCTGAAGCCTTGGCAACACAAGTGAGCGAGGAGAACAACAAAAATGGTTTGATTTACCCACCATTCTCTAATATCAGAAAAATCTCAGCCAATATAGCTGCAAATGTTGCTGCCAAGGCCTACGAACTAGGTGTGTACTCATTCTCTTTGCTCTTTCATCCTCATTTATTTCCTTGTAAACTAAACAACTGTTTCAACTGTTTTTGTAGGCTTGGCCACTCGTCTTCCACGACCTCAGGATCTTGTGAAGTATGCTGAGAGTTGCATGTATACCCCTGTATACCGCAATTATAGGTGATTGAGGACAACTTCTATGGATTCTTGCCTTTTGGTTCTAACAAGGATGTGTTTTGTGTTTGATGTTTTATTGTGCTTTCCTCAAGAGTAAACGATACGCATGAACTTATGTTTTTCTACTACGTAATTCAGCTTGGCTTATTTCAACCCTATGTACCATGTATTACTGCCTTTATCCATGTCAGTTAAACACAATGAAAACTATCACATTCATTTGAGTAAAGGACATCACAATGAAACACGTAACTACTACTGTCAGATAACGCAGAACATTTTAAAGGCACAGAGGATAGAACAAACAAATTCAACTTAAAAAAACCCAGTCAGGAGAGAATTCAAATTCCATATATATGCATAGAAACTATCGTCTTTATTCATTATGAAAACAAGCATAATTGGTTAGAACATTTTACATTTATTCATGTATTTATTAAAATTCTTGACTTATTAACTACTTTTCCTTTTCTCCTCCTATTCATTTATGATAATAATAATAGCAATAAATATTATATTTAAAATTGATAAAAAACCTTATTAATAATAATAAATAATAAAATAACACTACTACTAATTAAAATAATATTAATATTAAAACAATATATAATTTTTCATCTACTTAAATTCAATTTATTATTTGTAATTGATAATTAGCTTTTAGTTCTATAAAATAGGATAATGATACTTTGACAATATTTTTTTGACAACATTTTAACATCATCTACGTGTCATTCTGTGATTGGTCCAAAATTATTCCACAATCAATAATAATAATCATAAACATTAACATGGACCAATCATAGAATGACACGTAGATGATATTAAAATATTGTCAAAAAATATTGTTAAATATATATATATATATATATATATATGTATATATATATATATATATATATATATATATATATATATATCATGCATTTGAACCAAAAAAATATTAATGCCACGTTAAACTATCATTGATTGCATTTATTGATTTTAATATATATAACATTTAATAAATATAACATTTAATGATACTATTAAATTAAATTTATATTTTATTTAATACTTATGTCATTGACTTCATTTAATTAATATCACTCTTAAATATTTAACTCTTACCTAATAAATGTGTTATTTTTACAAAATAAAAGAAATACCCAATACATATATTTTAGAAACCTTTTTCTTCTCTCTCGTTTACTTTATTTATATGCGATATTTTTAACAACTCAAATAAATATTTGAGACAACACTAATACATTAATAAACAAAAGAATTATTTATTTCTTGTAGTAAAATATATATCTAACCAATATAGAAATAGTATTTTTGTTTCAAAGAAATCAAAAGATTTCTGCATATTTAACATCAGACTTATTAAATTAAAGTAGGAGAATAGATGAAGCCAAAACGCTTGACAGCACCAATTTCATATGTATAGAAGAAAAGTTATTAGAAACTGCAGTTTCAAGATTAGAAACCTGTGTAAGATTTGAGGGAGTATATAAAGAGAGAAGTGTGGGGATCAATGATCCCACAAAGCAAAACCTTTCTAATAAAGTAACCCTTCTCTTTCAACCATCTTCTTCTTCTTCAATTA

Gene Sequence:

>Vu_02831(+)