Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02824 LG1 41110717 41111424 PREDICTED: ethylene-responsive transcription factor TINY-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
A/G 41111000 missense_variant p.Asn95Ser
G/A 41111145 synonymous_variant p.Ser143Ser
G/T 41111241 synonymous_variant p.Pro175Pro
C/T 41111265 synonymous_variant p.Phe183Phe

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_02824.1
MTEQPGSESSSSASTRKHSSPEAHLAGPDHKKPKQARDSSSKHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATAEMAARAHDVAALAIKGNSAILNFPELAGSLPRPDSNSPRDVQVAAAKAAAMEVMDPPTTPSWTLSQSSSSSSGETSTADELGEIVELPSLGTSLEIPERSEEVVFVEPVGGWLYSEAWCDGIYGERECGGYFIGDEISMQESESMILCGFEGSLWQH*


CDS Sequence:
>Vu_02824.1
ATGACTGAGCAACCTGGCTCAGAATCATCCTCCTCTGCTTCCACTCGCAAGCACTCGTCTCCCGAGGCCCATTTGGCAGGTCCGGATCACAAAAAGCCCAAGCAGGCCCGAGATAGCAGCAGCAAGCACCCCGTTTACAGAGGAGTCCGAATGCGGGCCTGGGGAAAGTGGGTATCCGAAATCCGCGAGCCGAGGAAGAAGAACCGGATCTGGCTCGGCACCTTCGCCACCGCTGAGATGGCAGCGCGTGCTCACGACGTTGCGGCGCTCGCCATCAAAGGCAACTCCGCCATTCTCAACTTCCCCGAGCTCGCCGGCTCCCTGCCGCGGCCCGACTCCAACTCGCCGCGGGATGTTCAGGTGGCGGCGGCAAAGGCCGCCGCCATGGAGGTGATGGATCCCCCGACGACTCCATCGTGGACGCTGTCGCAGTCGTCTTCGTCGTCCTCGGGCGAGACGTCGACGGCGGATGAGCTGGGAGAGATAGTGGAGCTGCCGAGTCTGGGGACGAGTTTGGAAATACCGGAACGGAGTGAGGAGGTGGTGTTCGTGGAGCCGGTGGGCGGGTGGCTGTATTCTGAGGCGTGGTGTGACGGCATTTATGGTGAGAGGGAGTGTGGGGGTTATTTTATTGGAGATGAGATTTCAATGCAGGAGTCAGAGAGCATGATTCTTTGTGGCTTTGAGGGTTCCTTGTGGCAGCATTAA


Promoter Sequence:
>Vu_02824::LG1:41108717-41110717(+)
TAAGTATATCTTCTTAAGTTATTTTATATTTATCAACCAAGTTTTCTAATATGAACGAAAATGATATGTTATGAGTTTATAAAGTAAGAAATAATTCAGTCCCTGTTTTTCTCACACTTATCATCATTAGTTTGTAAATTAAGTACATTTAAACAAATATTATATATATAGTATGCGTTGTTATTATTTTAAAATGAATAGGTTTTTATTGTTCAGAAAACATGATCTAATTAAGTTTGGCGAGGTAAAGAGATTGTTAGGTGTTAAAATAATAGAAAAGAAGTTTATGAATAAGGTAATGAATTTAGAATGGAAAAGTGATGATGAATGTGGTGAGTGTAGATGTTTGTGCTTAGCACAAAAAAATAACATAAGCAGCTTCTCCATTACTATCTCGGCCAAACCCATGAAATTACTTGATAGATATCGTATTTATGAACGCTACGGTTTTAGAATTTATATACAGGAAAAGTAATCAGGAGAAAGAAGATGTGATGAACACATATATTTGCTCACATGTATTCAATCATCATCTATACCGAATTTAACATGTTTGAAAAAAAAAATCTTAGTTACGGTCATTAATGATATCAGCTCAGCGATACCTGAAGGAGAAAGTTTCTCTCCACTGTTTCTTAATGCAATGCTAGAAAAACCTGTTTAACCGAACTCGTGTCCATTCCTAATAGGTTAGGGAAACACTTTTTCGTTATTTATTGAAAAAAGTAGAATCACCACCGTATATAATCACAAAATGGATGCCAAATATCCAAAAATGTATTTTATGTCCACGAAAGATGTAGTTGAGCTACGTTGGATTTTGCAATGCCGGGACCAAATATACTTTAATGTCGTAGTGAGAAATTAGTAAAACGATGAAAACAAACTGTAGATTTTGTTCTGTTTTGTCATCCCCGAGAAAATATAATAAATAAAGCATAGGGTAAGCTGAGTAGTAGACGCACGAACGGATGAAAACGCCAACGTTTTGTTCTGAGCTCTTCTCTCAAAAGTTAAAAGCAGTCCCTTTTCTCATTTCTTCCGGGTGACAATGTGAATACAGTGGCAGTGCTTCTGCTATCTTTCATTCGCTAAAAGACAACGCACTGTGCTATTTTATTTTATCTGGTAAATCCTAATAATAAAATGTAGCAGTGTAATCAGATCGATGAGTAAAAGGGGAAAGATTAACTAACAGGCTTGGAGTCTGAGTCAAGTGTCACGGCCAAACAGGGAATCCAGTAATCACTCCTCCGTTCTGTACTTTCTATCGAATACGTCTATTTTAACATTTTAATTGCATTTATAACACCCGTCTTAATCGTATTTAATAATTTAAATTAATGTGATTAAAGGCTAAACGAAGGAGAGCGGGAGAATCAAAGTGGAAAGAGACATTACCATAAAGTCTGCCACGTCGGCAGGAAGAAAATTCCCATTCAGTCCAAGAAGCCCTCCATTCCTGTGCCAGGCTGTGTTTGTTAGGGCAATGGTCAAGCTATTAAGGGCGACTGGCCCCTTGTTACCTTCCTTCACTCACTTCACTCGCTCATCACTTTCACTACAAATAATTAAATAAATAAATAAATAAATTTTAGATCTTTGTAGATGTGCATGCACCATAACGTGTGACACATATATAGATATATATATTATGTATGCATGTTGATTATGGGATGATGGGTGTTTTGAAAGCAGAGCCATTCGTGTGGGGGTCACTTACAAATATGACCCACGTTTCTCTTTCATATCTTTAGTCCTCTTTTTCTCTTCTCTCCCCTCTCCTTACTAAAACCCAGCCCAACCCTTCACTCCTCTCATTTTCACTCGGCTCCTACTATATATGTACACACACTCCCCTCCCTCCGAGTTATTTCTCATTACATTACATCACTCACCACTCAACACCCAATCAAACCTTCAACACACATAACACGCATACTCACTCACACAACCACTGTCCTTTCAAAATACTCAACCACGTAAGCAAGCAAACGCAA


Gene Sequence:
>Vu_02824(+)
ATGACTGAGCAACCTGGCTCAGAATCATCCTCCTCTGCTTCCACTCGCAAGCACTCGTCTCCCGAGGCCCATTTGGCAGGTCCGGATCACAAAAAGCCCAAGCAGGCCCGAGATAGCAGCAGCAAGCACCCCGTTTACAGAGGAGTCCGAATGCGGGCCTGGGGAAAGTGGGTATCCGAAATCCGCGAGCCGAGGAAGAAGAACCGGATCTGGCTCGGCACCTTCGCCACCGCTGAGATGGCAGCGCGTGCTCACGACGTTGCGGCGCTCGCCATCAAAGGCAACTCCGCCATTCTCAACTTCCCCGAGCTCGCCGGCTCCCTGCCGCGGCCCGACTCCAACTCGCCGCGGGATGTTCAGGTGGCGGCGGCAAAGGCCGCCGCCATGGAGGTGATGGATCCCCCGACGACTCCATCGTGGACGCTGTCGCAGTCGTCTTCGTCGTCCTCGGGCGAGACGTCGACGGCGGATGAGCTGGGAGAGATAGTGGAGCTGCCGAGTCTGGGGACGAGTTTGGAAATACCGGAACGGAGTGAGGAGGTGGTGTTCGTGGAGCCGGTGGGCGGGTGGCTGTATTCTGAGGCGTGGTGTGACGGCATTTATGGTGAGAGGGAGTGTGGGGGTTATTTTATTGGAGATGAGATTTCAATGCAGGAGTCAGAGAGCATGATTCTTTGTGGCTTTGAGGGTTCCTTGTGGCAGCATTAA