Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02742 LG1 40344385 40345969 PREDICTED: transcription factor BEE 3-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, transcription, DNA-templated, transcription, DNA-templated, transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, protein dimerization activity, DNA-binding transcription factor activity, protein binding, DNA-binding transcription factor activity, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
T/C 40344415 missense_variant p.Phe11Leu
G/A 40344763 intron_variant
T/C 40344807 missense_variant p.Val108Ala
C/T 40345143 intron_variant
G/T 40345234 missense_variant p.Gln181His
A/G 40345239 missense_variant p.Gln183Arg
A/G 40345243 synonymous_variant p.Val184Val
C/T 40345286 intron_variant
A/G 40345310 intron_variant
A/G 40345333 intron_variant
G/A 40345351 intron_variant
C/A 40345357 intron_variant
A/T 40345371 intron_variant
T/C 40345372 intron_variant
A/C 40345375 intron_variant
T/A 40345380 intron_variant
G/A 40345397 intron_variant
A/T 40345399 intron_variant
G/A 40345420 intron_variant
G/T 40345428 intron_variant
T/A 40345857 intron_variant
A/T 40345858 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_02742.1
MAEFTADLQSFRPSFPFLDIDNMEIQNLVPFDSLLGSTEPEFPGNLEENFPGLFQCVDHNAVPALNEVHEGKKREATDMGDPSSGNSTPDISESGSKTKNICGRGKRVKRNAVEDKKPNQVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLSAASSYYDFNSESDALETMQRRKASEAKEIGKYVREGSDEGVSCFEATWPWYL*


CDS Sequence:
>Vu_02742.1
ATGGCAGAATTCACTGCAGATTTGCAAAGCTTTAGACCCTCCTTTCCTTTCTTGGATATCGATAACATGGAAATTCAAAACTTGGTGCCCTTTGACAGCTTATTGGGCTCTACAGAACCTGAATTTCCAGGAAACTTGGAAGAGAATTTTCCGGGTCTTTTTCAATGCGTGGATCACAATGCAGTTCCAGCGTTAAATGAAGTTCATGAAGGTAAAAAGAGGGAAGCAACTGATATGGGTGATCCCAGTTCTGGTAACTCAACTCCTGATATTTCTGAGAGTGGAAGCAAGACAAAAAATATTTGTGGAAGAGGCAAGAGAGTGAAAAGGAATGCGGTAGAAGACAAGAAACCAAACCAAGTAGTTCATGTCAGAGCCAAAAGAGGTCAAGCTACAGATAGTCACAGTTTAGCAGAGAGGGTTAGAAGAGGGAAAATCAATGAAAAACTTAGGTGCTTGCAGAACATTGTCCCAGGATGTTACAAGACCATGGGTATGGCGATAATGTTGGACGAGATCATAAACTATGTGCAGTCCTTGCAGCATCAAGTAGAGTTCCTCTCAATGAAGCTGAGTGCAGCAAGTAGCTATTACGACTTCAATTCAGAGTCAGATGCTTTAGAAACAATGCAGAGAAGAAAGGCATCCGAGGCGAAAGAGATAGGGAAGTATGTGAGAGAAGGAAGTGATGAAGGAGTTTCTTGCTTTGAAGCAACATGGCCATGGTACCTGTAA


Promoter Sequence:
>Vu_02742::LG1:40342385-40344385(+)
TGTTTATATTCTTATATCTCACTGAATGATTTTTATTTTTATTTAACATGGGATAAAATTAAATTGAATTTTGACCTAAAGAAAAATAAAAGAAGAAAAAGAAGGAGAATGGGGAGCAAGGTGGAGAAAGTAGAAAAGGTTGTAGCAAAGGTCAAATTCAGTTATGTGTTAGGTGAATCAAACCTAATTAGTAGCCATCCATAGGCCATGTTTGTAAATGGTAGCCTCATCTAAACTCCAACTTGTTTGGCTGTAGTACCTTATTATATGCTAAAGATTAAATACAAGTGCATGGGCAACTTCTTCCCACGTTTATAACATGAGAAAATTTCTTCTGATCTGCTAAGGTCTTACATTCAAGTTCTCAAATTAGGCAGTGCCTGCTATATGGCTTTGAAAAGGGGCAGCGAGGCCTTACTTCTATAGGGAAGGTTGTCCCAAAGTTAACACTTTGTCTTTGAATACCAATCCCCAATGCTTCTTACAGATGTTCAAACCATCTCCACTTTTGTAAGACCTACAACCACAATTGGGTGTATAGGGTAACCAACAACTATTGCTATTTCGCCTTATGGAGGCCTAGGAATCTACCACTTGTATCAGAATTCAACTCATTATTTTATTTTATTAATGAGAATTGAATCAAGTGTCATACGCCAGATATACACTCCACATGTCACAACCCCACTTCTGTTCTAAAGTTTGGTTCATTCATTTCTCAAATGCCAGTCCCAATCAGAGCCAATTCACCAAACAACAAAATCAACTGCCTCATTTCTTTCAATAGCTCAATAAAATAAAGAAAACTTGCTTTCCAAGAAATCCTGCAGCCCCTTTTTCTACAAAGTGCATGCTCAGTTTTTAAATTCTGCATTCAACATACCACTATGATGAAAAAAAAAGCCAAAAATTATAACTTAACAAACACTAATAGTACAACGAAAAATTCGATCCTCTTTATAAGGATGTGCAAGGAGCAATAATAAGAGTAAAAATAAAATTCAAAGCACAAAGAAACATCAACAATTTTAACGTGAAAAATCTTTTAATGTAAGGATAAAGATAACGAGTTATTCAAACCAAATATAAATCCACTATGATCAATAATAGGGTACAAAAGAGTCTCTAATAAAACCCTAAATGGTGTTTTAAATCAGTTAAGTTAATTAAGTATAAATGTTTACAAATGAGAACAAAGAAGATGAAAATTCTTCAAAACAGAGCTGCTGATACGAAACTGTTTTCAAACGATAAAAATGAAGAACCATAAGTCTGGAACACACTGTCCAACAATTAATCTAATCCAATGGTAAACCAGTACCGTTACAAAAGTTCTTATAAGAACATTAAGAATTAGAAAGAGTGATTTGAAACTTTGACACTAAATATAATCTCTAGCTTACTCGAATGATGTGTAATCCATCTAGTTGAGTTCACCCATAGGAAAAGGCTTTTATCAGCAGCGTTAGTTGAGTAAGAATCTAGATGTAAAAGTTTAGGAAATAGGGTATTGCTTTCGAAAATGTCTGTTGAAATAATTGCAGAAAGAAGGGAGTAAATCTTCCAGCAGTAAAAGCAGGAAGATTAAGTTCCACTCTAGAAAAACATAACGTTGATATATGGGAAGAGTTTGAACCTAAACTATGTGCTCCTACAGAAAACTACCCTTTTCCCACTACAGTTAAAACTTTGATGAAAGATCTGAAAGATAGGCATCCCAATTAAAGGTTTCTTTTTTTGTCATTAAATTAAAAGTTCCAAAAGCTCCAAAGAATAGACCCTGCTTTTCTCACAAAGGCATTGACCCATATTACAGTGCTTGTCTCACAAAGCATGGGCCCATGTTATAATTGGACATTTCTCCTGTATGTGGGGCCAACCTGCAGAACCTCGAGCTGCCACGTGGGTTAGTTAGACTAATCCTACATTATAAATACCTGTCTCAGGCACATTATCCAGATACCACTTAAAACCTTTCAAAACCTCTCTTATAAATCACA


Gene Sequence:
>Vu_02742(+)
ATGGCAGAATTCACTGCAGATTTGCAAAGCTTTAGACCCTCCTTTCCTTTCTTGGATATCGATAACATGGAAATTCAAAACTTGGTGCCCTTTGACAGCTTATTGGGCTCTACAGAACCTGAATTTCCAGGAAACTTGGAAGAGAATTTTCCGGGTCTTTTTCAATGCGTGGATCACAATGCAGTTCCAGCGTTAAATGAAGTTCATGAAGGTAAAAAGAGGGAAGCAACTGATATGGGTGATCCCAGTTCTGGTAACTCAACTCCTGATATTTCTGAGAGTGGAAGCAAGACAAAAAATGTAAACTTTCTTCGGCTTTGTTCGTTTTATTGTATTCTCATTCACCATTTTGTTTACTCATATGCAAGATAGATATTCGTGATTTATTTGTTGTCTTCAGATTTGTGGAAGAGGCAAGAGAGTGAAAAGGAATGCGGTAGAAGACAAGAAACCAAACCAAGTAGTTCATGTCAGAGCCAAAAGAGGTCAAGCTACAGATAGTCACAGTTTAGCAGAGAGGGTATATAGTTTTTAAAATAATTATTATAAAATTAACAAACTGTAAGAATTGACTATTACATCATGATATTAAAAAATATTCTGCTTTCTTTTCTTTGATTAAGATGTAAATATATTTTCAATTTATTGTTATTCAGGTTAGAAGAGGGAAAATCAATGAAAAACTTAGGTGCTTGCAGAACATTGTCCCAGGATGTTACAAGGTAAGGACATCTTTTTTACTATACCGAATTCGTATCCGTCTTGCTTAAATAGTTAACCTCTGATTTTGCAGACCATGGGTATGGCGATAATGTTGGACGAGATCATAAACTATGTGCAGTCCTTGCAGCATCAAGTAGAGGTAATTGATTGAAATAAAAAGTAGCATTGGATCAGTTATCTATAGAAGAAGAAAACTTGAAACATAATATTAACGTTAAAAAAGTAAATTTTAAGTATAACTCAGTCTCACAAAATCGATAAAAATGAACAGGTTTAGACTCGCTTGTATGTAATAAATTTGCTTTATATATGGTACTAACGATTAATATCTATGTTTGTTTTACATGAAGTTCCTCTCAATGAAGCTGAGTGCAGCAAGTAGCTATTACGACTTCAATTCAGAGTCAGATGCTTTAGAAACAATGCAGGTGCCTACTGCTAAATATTTCTTGATCAGCCTTATACGCATGTTTTAGTGTTGTTCGTTCTGTGTGGTTAGCAAACATTTGGTGGTTCTTGTGGTTAAGGATAACATTATTAAGAGTAGCCTTTCCACTTTATGAGATTCTGTACATCTCCACTATTGTCCCGACTCTATAAAATATTGTATGGACTAAATGAAATGAAATTTTGTCACATTTTGCAAATATAAGACTAAAGTAATATATTATAATATTATAGGAAGCAACGTGAAGGGTTGAATGAATAGTTGATTGTGAAAAGTAGAAGAATACTAAATTTTGTTTATTTATTGTGGCAGAGAAGAAAGGCATCCGAGGCGAAAGAGATAGGGAAGTATGTGAGAGAAGGAAGTGATGAAGGAGTTTCTTGCTTTGAAGCAACATGGCCATGGTACCTGTAA