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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02625 LG1 39268207 39269567 PREDICTED: serine/threonine-protein kinase EDR1 isoform X2
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Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, response to salt stress, sugar mediated signaling pathway, sugar mediated signaling pathway, protein phosphorylation, response to salt stress, sugar mediated signaling pathway, protein phosphorylation
Cellular Component   located in   mitochondrion, nucleus, nucleus
Molecular Function   enables   protein binding, protein serine/threonine/tyrosine kinase activity, protein kinase activity, protein serine/threonine/tyrosine kinase activity, protein kinase activity, MAP kinase kinase kinase activity, protein binding, protein binding, protein binding, protein kinase activity, protein binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine/tyrosine kinase activity, MAP kinase kinase kinase activity, MAP kinase kinase kinase activity, protein binding, protein serine/threonine kinase activity, protein binding
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_02625.1
MSNSVIKKLDNNNLQMLYGRFYNVQHQADDEKQNHQLILDTAARCDVFSYGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDVDPVIADIIRQCWQTIVAYHSEKLFFSFCLDCLTFSNSMDEFLSLNGETVGDDIDPKLRPTFAEIMAALKPLQRPITASQVPRSSAQSSRVTEFPAG*


CDS Sequence:
>Vu_02625.1
ATGTCAAACTCGGTAATTAAAAAGTTGGATAATAATAACCTTCAGATGCTATATGGAAGGTTCTACAATGTTCAGCATCAGGCTGATGATGAGAAACAGAATCATCAGTTGATCTTGGATACTGCAGCTAGGTGCGACGTTTTCAGCTATGGCGTCATATTGTGGGAGCTCTCTACGTTGCAGCAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTGGGTTTCCAACATCGCCGTCTAGACATTCCAGATGATGTAGACCCTGTCATTGCAGATATTATCAGACAATGCTGGCAGACAATTGTGGCATATCACTCTGAGAAGCTGTTCTTCTCATTCTGTTTAGACTGTTTGACGTTCTCCAACTCTATGGATGAATTTCTAAGTTTAAACGGTGAAACAGTTGGAGATGATATAGATCCAAAGCTGAGGCCAACATTTGCTGAAATCATGGCTGCTCTGAAGCCATTGCAGAGGCCAATTACTGCTTCTCAAGTGCCTAGATCAAGTGCTCAGTCATCACGAGTTACTGAATTTCCCGCAGGATAG


Promoter Sequence:
>Vu_02625::LG1:39269567-39271567(-)
TCCTACCTACGGTTTTCTTCTTTTTCCATTTCTACTTATGTATGGTCCCATATGATCAATGATTCCATCTGAGTGTACAATAGTTTGGTCTCGTCAATAGATAATATCAGTAGAGACTTTAGAGTTTTAGTGAGATAAGTGGATCAAATGGAAGATAGTTTGATTGAGTTGTTTCTTTAATATTTCTAATTTAAGATTTACCATTTCAAAATATTGTGTGAAGTAATTTTGTGTCAATTCTTCAGCTATTATGTAATATTGGTTGTTTTTGTTGTGCCACCATCTCATTTACATCTTTATTTGGTTCCCTGTTGAATGATGGAGGTGCTTGTTTAATTTATGTAAATTGCAATAGGTCCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCAGTAACTCGGCCTCCAAATCTTTCAATTGTTTCTGAATTTCTTCCTAGGTAACTTGAATTTCTTCATTTCCTGAGCTTAATGAGACTGATCTTGTGGATTCTCAATTTTTTAGAAGTCGATATTTGCTTGCCCTACCAGCTTAATCAATTAAATAGACAAATAGTTGTTATTGTTCTGAGACAAGAGTAATGCTTCATCTTCAAAAAATTATTTTCTAAAATCACTTTATACTGATGTTTGTTAGGCTGGTAACGTAAGAAGTCAGAAATTATAGATAACCACACTCAAGGGTATTTATTATACTTGATTAATATCTTTCTGAGTTTGATTCTTCGAATACTGAGATGTAGATAATCTTTTGCAGAGGGAGTTTGTATAGATTAATTCACCGACCTAACAATCAATTAGATGAGCGAAGGCGGTTGCGGATGGCCCTTGATGCTGTAGGATCTTGTTGTCTCTTAGTGAATGCAGTTTCACTCGGTAAATTATTGCTGTAATAACCAGAGATGTCATGATTTATAACCTTTCTCTCTTTTGATTATTCAGGCCCGAGGAATGAACTATCTGCACAGCAGTACTCCAGTGATAGTGCATCGTGATTTGAAGTCCCCAAATCTTCTTGTTGATAAAAACTGGGTTGTAAAGGTTCTGATAACTAATCTTGTGATATGTGTTCCTTATAGTGTTGTGATTGACTTTATTTGTTGATAGGTTATCACTCTTTTTGCTGTTGAATAGGTATGTGATTTTGGCTTATCACGAATGAAGCATAGCACCTTCCTTTCTTCCAGATCAACTGCGGGAACAGTAAGCTATCATAATTTTGATTCCTTTGTCCAATAGCTGTTGTAAAATCTGTCCCCTTTATGAAATAATATCATGCTAATAATCATATGTTAGAACACAAATTAAAGACACTTGGTATATCCTTTACCAAAAAAATAATTTTGGAAGGCTGAGGATTTTCTTCCCTGTAAATTTTTAAACTACGGTTTTTCTGTTATGCTTTGGCTCTGTCGTTTTGAAGCTCCTAATTTGGGCATTGTTTATGACATATATTTTCTTGCATCATCATTCTTTTATCTGCAATGATGAAAGGCCACCTAGTAGAACTTATTGGAATTGGATATGCAAGCAAATACTTATGTGTATGATATGTTTCAGGCTGAATGGATGGCTCCAGAAGTGTTGAGAAATGAACTTTCAGATGAAAAGTAAGCTCTGTTATTCTTGGCAGTTGTTGTTTTGCTTTAGGGACACGAAGGTGTTGTGAAAACCCTTCCAATCCCACCACTCTTCCTCTATTTAACATTGCCACAAATGAATGACTAGCACATTGTGCATGCAAATATTTATGTAGATTTCATTAGTTTAACAAGTAGGCTGGACAGACTGATTCTTTAGCCTATTCTAAATATCAATAGCCAAATTTATGAATTTAGATTAAGTGCACGTTTGATTCAGCTTATTTTGAAGAAATAATTTTTCATGTTTGTTAGCTTTCTGAAAGAGCTTTTGGAAAAGTTATTATTTGCTAGAATTTATACTATCCCAAGCAAGCTAATTATACCAAACAGGAACTAACTGC


Gene Sequence:
>Vu_02625(-)
ATGTCAAACTCGGTAATTAAAAAGTTGGATAATAATAACCTTCAGATGCTATATGGAAGGTTCTACAATGTTCAGGTATGGTTTTTAAGGCTTTACACTGAGGAAAAACATATTTGAGGTTGGAGCAATGAATCACGATAGGGTATTGGACAGATTGAGTTCCACGACTGGAGATCAAATGTCTGTCTTCTATAGTTTGATCATGAGGAATCTTTAGATTTCTTAGCATCAGGCTGATGATGAGAAACAGAATCATCAGTTGATCTTGGATACTGCAGCTAGGTCGAATTCTCCAATGTGGTCCATATCTCTTTTTATTTTTTCTGAAATGATAATATTAATAAAAACATTCATGGTCTTGCACCTAAAAACTAAAGATTTTGGGAGAGTTGGTTCTTGATGCTAACATCCACATTTTTTTCCTAGGAGGAATGTAATATTCCATTTTTTCTCTTTGCAATTAAAATTATTCTTTTATCAACAAAAAAATAAGCTTGGTTAACTTGGTTAATCCTCTGGAATCTTCGGTTTTAGGTAAAACAAAACAAGGTTTTTCTTTGCAGTTCACTAAAAACTGTTCTATCATTGTCTTGTCTCAAACCAATTTTCTTGTTGGCTCAGCCACTTCTTAAAACTCAATGCTTTTATGATGACAAGTTGCTACTCATTTTCTAGGTGCGACGTTTTCAGCTATGGCGTCATATTGTGGGAGCTCTCTACGTTGCAGCAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTGGGTTTCCAACATCGCCGTCTAGACATTCCAGATGATGTAGACCCTGTCATTGCAGATATTATCAGACAATGCTGGCAGACGTGAGTGTACTTTCAATCATTTTGTCCTTCCATTCTGAACTATGACTCAAATATGTTTATACTGTTCTATTTAACAATATAGAATTGTGGCATATCACTCTGAGAAGCTGTTCTTCTCATTCTGTTTAGACTGTTTGACGTTCTCCAACTCTATGGATGAATTTCTAAGTTTAAACGGTGAAACAGTTGGAGATGATATGTTTTCTTATTTGAATGTGATCTTTTAAAGGGCATAAACATGTTTCTAAGGTTGTACATACGAGGTTGCAATAATATATCTCAGTCATTGCATGTAATAAATTTATGCACGTGATAGAATATTTTTCTTTTCTACAATAAGATGTATGACTGGATATTCTACTTTTCTGAATTACAGAGATCCAAAGCTGAGGCCAACATTTGCTGAAATCATGGCTGCTCTGAAGCCATTGCAGAGGCCAATTACTGCTTCTCAAGTGCCTAGATCAAGTGCTCAGTCATCACGAGTTACTGAATTTCCCGCAGGATAG

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