Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02305 LG1 30396312 30397981 PREDICTED: serine/threonine-protein kinase-like protein At3g51990
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Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, phosphorylation, response to nitrogen compound, defense response to bacterium, response to fungus, defense response to bacterium, defense response to other organism, response to temperature stimulus, defense response to other organism, defense response to bacterium, tissue development, protein phosphorylation, phosphorylation, response to inorganic substance, defense response to other organism, protein phosphorylation, response to fungus
Cellular Component   is active in   plasma membrane
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   transmembrane receptor protein tyrosine kinase activity, protein serine/threonine kinase activity, transmembrane receptor protein tyrosine kinase activity, protein serine/threonine kinase activity, transmembrane receptor protein tyrosine kinase activity, transmembrane receptor protein tyrosine kinase activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
C/G 30396318 5_prime_UTR_premature_start_codon_gain_variant
T/G 30396324 5_prime_UTR_premature_start_codon_gain_variant
G/T 30396340 5_prime_UTR_variant
G/C 30396464 missense_variant p.Arg25Thr
G/A 30396473 missense_variant p.Ser28Asn
C/A 30396507 synonymous_variant p.Ala39Ala
A/C 30396636 missense_variant p.Lys82Asn
G/A 30396646 missense_variant p.Glu86Lys
C/T,* 30396821 missense_variant p.Ala144Val
G/A 30396824 missense_variant p.Arg145His
G/T 30396876 synonymous_variant p.Ser162Ser
G/A 30396992 missense_variant p.Arg201His
A/T 30397030 missense_variant p.Ser214Cys
C/G 30397207 missense_variant p.Arg273Gly
G/A 30397208 missense_variant p.Arg273Gln
G/A 30397282 missense_variant p.Ala298Thr
C/A 30397304 missense_variant p.Ala305Glu
G/C 30397317 missense_variant p.Glu309Asp
A/G 30397335 synonymous_variant p.Lys315Lys
A/G 30397353 synonymous_variant p.Ser321Ser
G/A 30397356 synonymous_variant p.Leu322Leu
A/T 30397424 missense_variant p.Tyr345Phe
C/A 30397514 missense_variant p.Ala375Glu
T/A 30397572 synonymous_variant p.Ile394Ile
C/T 30397581 synonymous_variant p.Val397Val
C/A 30397588 synonymous_variant p.Arg400Arg
C/T 30397709 missense_variant p.Thr440Ile
A/G 30397715 missense_variant p.Asn442Ser
C/T 30397981 splice_region_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_02305.1
MRYLTCNAETAIAICHPHSPKKNKRPTSPTQAHTVPHFAYSDILAATNAFSADTFLGKGSHGRVYKATLHGGALIAAVKKTKPSKEIEILSHLKSPRLVNLIGFCNDRTNCNNNKLIVVEYMPNGSLHDLLHSTKTVGPPGWTARVRFAVHVAKAVRFLHSSEPPVIHRDIKSSNVLIDDKWKARLGDFGLAFRGHMADSRVPPAGTLGYLDPSYLAPGDLSPKSDVFSFGILLLEIASGRHAIDVRHSPPSVLDWAVPLVRRGQFRDICDPRIGVPPNMAAFRRMMVLAARCVTSTAESRPTIAEVVECLTAVKKNFDASLVWMRMIRRVVKARGDDWDRSEEYVRLVKGGSRKSRRNGKVSSMLGVQYENGPANHTVRSRSVGSGFFGDVKINSVMERYPNQFGFGYRKVRLKRSMSMGLLKHYGNESNTCHERHNDTHNNDYVRVSSTEMELSKLGIVDKNLD*


CDS Sequence:
>Vu_02305.1
ATGCGCTACCTCACTTGCAACGCCGAGACAGCAATAGCCATATGCCACCCTCACTCCCCCAAGAAGAACAAAAGGCCCACAAGCCCAACACAGGCCCACACCGTGCCACACTTCGCCTACTCCGACATCCTCGCCGCCACGAACGCTTTCTCCGCCGACACCTTCTTAGGCAAAGGCAGCCACGGCAGAGTCTACAAAGCCACCCTCCACGGCGGCGCGCTCATCGCTGCCGTCAAAAAAACCAAACCTTCTAAGGAGATAGAAATTCTCTCCCACCTCAAAAGCCCGCGCTTGGTCAACCTAATTGGCTTCTGCAACGACCGAACTAACTGCAACAATAACAAACTCATTGTTGTGGAGTATATGCCCAACGGTTCGCTCCACGACCTTCTCCACTCCACCAAAACGGTTGGGCCTCCCGGTTGGACAGCCCGTGTCCGGTTCGCGGTTCACGTCGCAAAAGCTGTTCGTTTTTTGCACTCGTCGGAACCTCCCGTTATTCACCGTGATATTAAATCGTCCAACGTGTTAATCGACGATAAGTGGAAAGCGCGACTCGGTGACTTCGGACTCGCGTTTCGAGGACACATGGCGGATTCTCGCGTGCCGCCAGCGGGGACGTTAGGGTACCTCGACCCGAGCTATCTTGCGCCGGGGGACTTGAGTCCCAAGAGCGATGTCTTCAGTTTTGGAATCTTGCTGCTGGAGATAGCGAGTGGGAGGCACGCGATTGACGTGAGGCACAGTCCGCCGTCGGTGTTGGATTGGGCGGTGCCGTTGGTCCGCCGTGGCCAGTTCCGGGATATTTGCGACCCCCGGATCGGGGTGCCGCCGAACATGGCAGCGTTCCGCAGGATGATGGTGCTAGCCGCGAGGTGTGTGACGTCAACGGCGGAGAGTCGGCCGACGATTGCGGAGGTGGTGGAGTGTCTGACGGCGGTAAAAAAGAATTTTGACGCATCACTGGTGTGGATGAGAATGATACGGCGCGTGGTGAAGGCGCGTGGCGATGATTGGGACAGGAGTGAGGAGTATGTGAGATTAGTTAAAGGCGGGAGTAGAAAGAGTAGAAGGAATGGGAAGGTATCTAGCATGTTGGGTGTACAGTATGAGAATGGACCCGCAAATCACACGGTTAGGTCAAGATCCGTTGGTTCTGGTTTTTTCGGGGATGTGAAAATTAACTCGGTCATGGAACGGTACCCTAACCAATTCGGGTTCGGGTATAGGAAGGTAAGGCTAAAGAGATCGATGTCTATGGGGCTTTTGAAACATTATGGTAATGAATCAAATACGTGTCATGAGAGGCATAACGATACTCATAACAATGATTACGTTAGAGTGAGTTCCACAGAGATGGAACTTTCAAAGTTGGGTATTGTGGATAAGAATTTGGACTAG


Promoter Sequence:
>Vu_02305::LG1:30394312-30396312(+)
CAAACTAGCCCAAATTCACTTAACACTTTACTACCTCATAACCACAACAGATTTCATTCATCAACAATCTCAAATTTACACAATTACAACACATATATTCATCTAAACCAATTTATCAACAACCTATCACAGTTTCACAATTTCATCCTTTCAACACAATCAATTCACATTACTCTAGAACTAACAGTTTAAACCCAAGCAGTCACATACTATCAAATTCAAAACATATACAGATCATATGACAATTCAATACAACAGCTAGCTCCCCTTACCTCAGAGACAACAACCACGTACACAGAAACGTTCCAGTCGTACCTTGCACAGCAAGGAAACTCAACAGAAACCTACAACTCACCAATTGGTGATAGAGAACCACACTTAGAACCTAATTTGAGCTAGAAATGGAAGGAATAACTACTGATCACATGCAACCAGAATCGTTGCATGCTCACAGCACAGAGAAGAACGAACAGAAAAGGGAGACAACTTACCAACTGAAGAACGAGAAATTGATCGGTCTAAACTCAAGCCCTCAACGCCAGGATCGCCTAAGCACTTCCTGATCGTTGAACAGATAACTCAGCAAGAAGAAATCTTAGAGAGAATTCAGAAAACTCTGAGGAATACAGTTCTAGAGAGATGAAATGTTCTTAGAATAATGAGAAGTGTTTATAAGAATTCTATTTATATTATAAGATTATTTTAAAGTAAAATAATCTATCTCATTATTCTAATACACCAATCTACTCTATAATACTCTATTTTTCATGTCTTTACATTTTTGTTATAGAATAAGTTAGTATTTGACAGAGATTTCTATTTCATAACATTTAGTTGTTCCTGTGGCTCCTTTATTTTCATATAAATTAAGTCTATCAACTTCTATTTAATTGAATCAAAGTACAATGCAAGTTGTGTGTTGTATTTCAAAGTTTTTTATAAAGCATATGTACAACATAAATCCTTTGTTCAACTTTTTGTAGTCACACATAATTTGTTATTATCTATGTACAATATTATTAATATTATATATATATATATATATATATATATATATATATATATATATATATATTTAAGATGTGAAGAAATATAAAAGAGATATAGATAAAAAAAATGTTATCATACAATTAGCATATTTAAACCATGATAAATTAAAAACTTTTTAGTATTTGACGAAAAATTATTATCATTCTTATTATTTAGAAAGTGTTTTCTAGATGAAGAATTGACTTTATAAATTATTTCAAAGCAGTATTAGAGCAGATATTGATTACACTAATTAATCAGAAATATATATAATGGAAACAAGATATGTGAAGAAATGAAAAACATTTTCCCGCCCAATAAATAAAGTTTATTTCTTTGTGTTTTTATAAAATGAAAAAAAAATCATCCATCTTTGGTTTTTGTCATGTTTAGTTATAGCATACCATCCCCCACTTTTAGATCTAAGTTTACGTGGATTCTATATGTTTTTTTTCTGTCACTTTTTTTTTTCTGAATTCTTTTCTACATTTTTTTCTCACAGGTTTTTGGATTCTCTTCGAATAAAGATTATTTTTGGTGGGTTTTTTTTTGTGCTGTCTTACAATAAGCATTATGAATACATTCATATTAGTATTTTAAAAATTATTTGAATATATTTTGAAACATCAATAATATTCATCAGTATAATTTGAAACACAGCAAGAAAATAACACAGAAAAACCCAAACAGAAAATCCAAATTCTTTCCTTTCATTCCGCGATTAAATATGCTCGAGAGTTTGCAAGCCTCTTGAATGCATTGACATTAAAAAAACATTTTCAAAAATAAAATAAAAACGTGGAAATCATTGATTTGAAGACATTCTATTATTAACGAACAAATTATTATTAGTGTGGGATCAGAGGATTGTTTAAATGTTCTCAGATCACTTACTATTGTAATACGTTCCTTCAAGCTTTGAACCATTTATTTATTTCCATTTAATTCAATCACCCAATATAATAAATCGA


Gene Sequence:
>Vu_02305(+)
ATCTATCTATATTTTAAATGTTTCTCTCGTCACAGTTACGCCCTCTCTTTTCTAATTTCTCACTCACAACGCAAAAACAATGCGCTACCTCACTTGCAACGCCGAGACAGCAATAGCCATATGCCACCCTCACTCCCCCAAGAAGAACAAAAGGCCCACAAGCCCAACACAGGCCCACACCGTGCCACACTTCGCCTACTCCGACATCCTCGCCGCCACGAACGCTTTCTCCGCCGACACCTTCTTAGGCAAAGGCAGCCACGGCAGAGTCTACAAAGCCACCCTCCACGGCGGCGCGCTCATCGCTGCCGTCAAAAAAACCAAACCTTCTAAGGAGATAGAAATTCTCTCCCACCTCAAAAGCCCGCGCTTGGTCAACCTAATTGGCTTCTGCAACGACCGAACTAACTGCAACAATAACAAACTCATTGTTGTGGAGTATATGCCCAACGGTTCGCTCCACGACCTTCTCCACTCCACCAAAACGGTTGGGCCTCCCGGTTGGACAGCCCGTGTCCGGTTCGCGGTTCACGTCGCAAAAGCTGTTCGTTTTTTGCACTCGTCGGAACCTCCCGTTATTCACCGTGATATTAAATCGTCCAACGTGTTAATCGACGATAAGTGGAAAGCGCGACTCGGTGACTTCGGACTCGCGTTTCGAGGACACATGGCGGATTCTCGCGTGCCGCCAGCGGGGACGTTAGGGTACCTCGACCCGAGCTATCTTGCGCCGGGGGACTTGAGTCCCAAGAGCGATGTCTTCAGTTTTGGAATCTTGCTGCTGGAGATAGCGAGTGGGAGGCACGCGATTGACGTGAGGCACAGTCCGCCGTCGGTGTTGGATTGGGCGGTGCCGTTGGTCCGCCGTGGCCAGTTCCGGGATATTTGCGACCCCCGGATCGGGGTGCCGCCGAACATGGCAGCGTTCCGCAGGATGATGGTGCTAGCCGCGAGGTGTGTGACGTCAACGGCGGAGAGTCGGCCGACGATTGCGGAGGTGGTGGAGTGTCTGACGGCGGTAAAAAAGAATTTTGACGCATCACTGGTGTGGATGAGAATGATACGGCGCGTGGTGAAGGCGCGTGGCGATGATTGGGACAGGAGTGAGGAGTATGTGAGATTAGTTAAAGGCGGGAGTAGAAAGAGTAGAAGGAATGGGAAGGTATCTAGCATGTTGGGTGTACAGTATGAGAATGGACCCGCAAATCACACGGTTAGGTCAAGATCCGTTGGTTCTGGTTTTTTCGGGGATGTGAAAATTAACTCGGTCATGGAACGGTACCCTAACCAATTCGGGTTCGGGTATAGGAAGGTAAGGCTAAAGAGATCGATGTCTATGGGGCTTTTGAAACATTATGGTAATGAATCAAATACGTGTCATGAGAGGCATAACGATACTCATAACAATGATTACGTTAGAGTGAGTTCCACAGAGATGGAACTTTCAAAGTTGGGTATTGTGGATAAGAATTTGGACTAGAGAATCGAAGTAACTGAGTAGCATATATTGCTTTTGTGATTGAGTTTTTGATACACATGCATGGGAAGAGGGTTACCCAGAAACGATTTGGTGCATGTGGATACCACTAACACTTTAGCATCTTACTTGTCAACAGAAAAGAAATTGCTGACCTAGTCATATTAATAATAATATTCTTGATTTTGATGTC